RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 KDM4AO75164 1064 aa9.35□□□□□ -0.91
UBE2D3-230ENST00000510599 AVPP01185 164 aa9.35□□□□□ -0.91
UBE2D3-230ENST00000510599 CTC1Q2NKJ3 1217 aa9.35□□□□□ -0.91
UBE2D3-230ENST00000510599 KDM2AQ9Y2K7 1162 aa9.35□□□□□ -0.91
UBE2D3-230ENST00000510599 MMP16P51512 607 aa9.34□□□□□ -0.91
UBE2D3-230ENST00000510599 USP46P62068 366 aa9.34□□□□□ -0.91
UBE2D3-230ENST00000510599 TTC24A2A3L6 582 aaPredicted RBP9.33□□□□□ -0.92
UBE2D3-230ENST00000510599 IRF6O14896 467 aa9.33□□□□□ -0.92
UBE2D3-230ENST00000510599 AXIN1O15169 862 aa9.33□□□□□ -0.92
UBE2D3-230ENST00000510599 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
UBE2D3-230ENST00000510599 MINK1Q8N4C8 1332 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-230ENST00000510599 WNT7AO00755 349 aa9.32□□□□□ -0.92
UBE2D3-230ENST00000510599 MDM2Q00987 491 aaPredicted RBP9.32□□□□□ -0.92
UBE2D3-230ENST00000510599 TRIM32Q13049 653 aa9.32□□□□□ -0.92
UBE2D3-230ENST00000510599 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
UBE2D3-230ENST00000510599 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
UBE2D3-230ENST00000510599 HOXA2O43364 376 aa9.29□□□□□ -0.92
UBE2D3-230ENST00000510599 SNIP1Q8TAD8 396 aaKnown RBP9.29□□□□□ -0.92
UBE2D3-230ENST00000510599 CCDC102AQ96A19 550 aa9.29□□□□□ -0.92
UBE2D3-230ENST00000510599 REPIN1Q9BWE0 567 aaKnown RBP9.29□□□□□ -0.92
UBE2D3-230ENST00000510599 CLCN1P35523 988 aa9.28□□□□□ -0.92
UBE2D3-230ENST00000510599 VSIG10Q8N0Z9 540 aa9.28□□□□□ -0.92
UBE2D3-230ENST00000510599 GPCPD1Q9NPB8 672 aa9.28□□□□□ -0.92
UBE2D3-230ENST00000510599 CCDC24Q8N4L8 307 aa9.27□□□□□ -0.93
UBE2D3-230ENST00000510599 HLA-CQ95604 372 aa9.27□□□□□ -0.93
UBE2D3-230ENST00000510599 DACH1Q9UI36 760 aa9.27□□□□□ -0.93
UBE2D3-230ENST00000510599 TREML4Q6UXN2 200 aa9.26□□□□□ -0.93
UBE2D3-230ENST00000510599 MRGPRX2Q96LB1 330 aa9.26□□□□□ -0.93
UBE2D3-230ENST00000510599 GMPR2Q9P2T1 348 aaKnown RBP9.26□□□□□ -0.93
UBE2D3-230ENST00000510599 C11orf95C9JLR9 678 aaPredicted RBP9.25□□□□□ -0.93
UBE2D3-230ENST00000510599 SMPD1P17405 629 aa9.25□□□□□ -0.93
UBE2D3-230ENST00000510599 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
UBE2D3-230ENST00000510599 FAM217BQ9NTX9 383 aaPredicted RBP9.24□□□□□ -0.93
UBE2D3-230ENST00000510599 JUNDP17535 347 aa9.23□□□□□ -0.93
UBE2D3-230ENST00000510599 WNT7BP56706 349 aa9.23□□□□□ -0.93
UBE2D3-230ENST00000510599 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
UBE2D3-230ENST00000510599 NUTM1Q86Y26 1132 aa9.23□□□□□ -0.93
UBE2D3-230ENST00000510599 J3QL48 77 aa9.21□□□□□ -0.94
UBE2D3-230ENST00000510599 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
UBE2D3-230ENST00000510599 LCE2AQ5TA79 106 aaPredicted RBP9.2□□□□□ -0.94
UBE2D3-230ENST00000510599 RC3H1Q5TC82 1133 aaKnown RBP9.2□□□□□ -0.94
UBE2D3-230ENST00000510599 ATP13A2Q9NQ11 1180 aa9.2□□□□□ -0.94
UBE2D3-230ENST00000510599 SKOR1P84550 965 aa9.19□□□□□ -0.94
UBE2D3-230ENST00000510599 NUDT12Q9BQG2 462 aa9.19□□□□□ -0.94
UBE2D3-230ENST00000510599 SENP2Q9HC62 589 aa9.19□□□□□ -0.94
UBE2D3-230ENST00000510599 WFS1O76024 890 aa9.18□□□□□ -0.94
UBE2D3-230ENST00000510599 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-230ENST00000510599 FDX1P10109 184 aa9.17□□□□□ -0.94
UBE2D3-230ENST00000510599 HPS1Q92902 700 aa9.16□□□□□ -0.94
UBE2D3-230ENST00000510599 C6orf229H3BNL8 230 aa9.15□□□□□ -0.94
UBE2D3-230ENST00000510599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.15□□□□□ -0.94
UBE2D3-230ENST00000510599 TRIM47Q96LD4 638 aa9.15□□□□□ -0.94
UBE2D3-230ENST00000510599 ALDH1A1P00352 501 aa9.14□□□□□ -0.95
UBE2D3-230ENST00000510599 CCNYL3P0C7X3 344 aa9.14□□□□□ -0.95
UBE2D3-230ENST00000510599 EHBP1Q8NDI1 1231 aa9.14□□□□□ -0.95
UBE2D3-230ENST00000510599 KIFC2Q96AC6 838 aa9.14□□□□□ -0.95
UBE2D3-230ENST00000510599 MS4A1P11836 297 aa9.13□□□□□ -0.95
UBE2D3-230ENST00000510599 SSTR3P32745 418 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-230ENST00000510599 NFX1Q12986 1120 aaKnown RBP9.13□□□□□ -0.95
UBE2D3-230ENST00000510599 SNRPBP14678 240 aaKnown RBP9.12□□□□□ -0.95
UBE2D3-230ENST00000510599 TTLL12Q14166 644 aaPredicted RBP9.12□□□□□ -0.95
UBE2D3-230ENST00000510599 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
UBE2D3-230ENST00000510599 PTPRNQ16849 979 aa9.11□□□□□ -0.95
UBE2D3-230ENST00000510599 PTCRAQ6ISU1 281 aaPredicted RBP9.11□□□□□ -0.95
UBE2D3-230ENST00000510599 SPIRE2Q8WWL2 714 aa9.11□□□□□ -0.95
UBE2D3-230ENST00000510599 WASF2Q9Y6W5 498 aa9.11□□□□□ -0.95
UBE2D3-230ENST00000510599 SIAH2O43255 324 aa9.09□□□□□ -0.95
UBE2D3-230ENST00000510599 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 WIPF1O43516 503 aa9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 SH3BP2P78314 561 aa9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 INSM1Q01101 510 aaPredicted RBP9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 AMHR2Q16671 573 aa9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 UNC93B1Q9H1C4 597 aa9.08□□□□□ -0.96
UBE2D3-230ENST00000510599 MOXD2PA6NHM9 499 aa9.07□□□□□ -0.96
UBE2D3-230ENST00000510599 NDUFV2P19404 249 aa9.07□□□□□ -0.96
UBE2D3-230ENST00000510599 MTMR2Q13614 643 aa9.07□□□□□ -0.96
UBE2D3-230ENST00000510599 GIGYF2Q6Y7W6 1299 aaKnown RBP9.07□□□□□ -0.96
UBE2D3-230ENST00000510599 BARGINQ6ZT62 677 aa9.07□□□□□ -0.96
UBE2D3-230ENST00000510599 PRR7Q8TB68 274 aa9.07□□□□□ -0.96
UBE2D3-230ENST00000510599 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
UBE2D3-230ENST00000510599 ZMYND10O75800 440 aa9.06□□□□□ -0.96
UBE2D3-230ENST00000510599 DESI1Q6ICB0 168 aa9.06□□□□□ -0.96
UBE2D3-230ENST00000510599 EVA1BQ9NVM1 165 aa9.06□□□□□ -0.96
UBE2D3-230ENST00000510599 KCNH2Q12809 1159 aa9.05□□□□□ -0.96
UBE2D3-230ENST00000510599 DIXDC1Q155Q3 683 aa9.05□□□□□ -0.96
UBE2D3-230ENST00000510599 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
UBE2D3-230ENST00000510599 LINC01559Q495D7 138 aa9.04□□□□□ -0.96
UBE2D3-230ENST00000510599 PLEKHG3A1L390 1219 aa9.03□□□□□ -0.96
UBE2D3-230ENST00000510599 BMP1P13497 986 aa9.03□□□□□ -0.96
UBE2D3-230ENST00000510599 ZNF511Q8NB15 262 aa9.03□□□□□ -0.96
UBE2D3-230ENST00000510599 BEGAINQ9BUH8 593 aa9.03□□□□□ -0.96
UBE2D3-230ENST00000510599 VARSP26640 1264 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-230ENST00000510599 GJA5P36382 358 aa9.02□□□□□ -0.97
UBE2D3-230ENST00000510599 SLC16A10Q8TF71 515 aa9.02□□□□□ -0.97
UBE2D3-230ENST00000510599 ZC3H15Q8WU90 426 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-230ENST00000510599 BAP1Q92560 729 aa9.02□□□□□ -0.97
UBE2D3-230ENST00000510599 TLL2Q9Y6L7 1015 aa9.02□□□□□ -0.97
UBE2D3-230ENST00000510599 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
UBE2D3-230ENST00000510599 MPNDQ8N594 471 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms