RNA–Protein interactions for RNA: ENST00000509469.5

PACRGL-221, Transcript of parkin coregulated like, human

TSL 4

Gene PACRGL, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PACRGL-221	ENST00000509469	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.49	■■■□□ 2.79
PACRGL-221	ENST00000509469	LAMC1	P11047	1609 aa		32.48	■■■□□ 2.79
PACRGL-221	ENST00000509469	PLEKHH1	Q9ULM0	1364 aa		32.47	■■■□□ 2.79
PACRGL-221	ENST00000509469	C14orf93	Q9H972	538 aa	Known RBP	32.47	■■■□□ 2.79
PACRGL-221	ENST00000509469	MEX3C	Q5U5Q3	659 aa	Known RBP	32.46	■■■□□ 2.79
PACRGL-221	ENST00000509469	CFAP70	Q5T0N1	1121 aa		32.45	■■■□□ 2.79
PACRGL-221	ENST00000509469	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.44	■■■□□ 2.78
PACRGL-221	ENST00000509469	NUTM2E	B1AL46	878 aa	Predicted RBP	32.44	■■■□□ 2.78
PACRGL-221	ENST00000509469	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.44	■■■□□ 2.78
PACRGL-221	ENST00000509469	LRRC59	Q96AG4	307 aa	Known RBP	32.44	■■■□□ 2.78
PACRGL-221	ENST00000509469	PNPLA6	Q8IY17	1366 aa		32.4	■■■□□ 2.78
PACRGL-221	ENST00000509469	DHX57	Q6P158	1386 aa	Known RBP	32.38	■■■□□ 2.77
PACRGL-221	ENST00000509469	NUTM2F	A1L443	756 aa		32.37	■■■□□ 2.77
PACRGL-221	ENST00000509469	ESCO1	Q5FWF5	840 aa		32.36	■■■□□ 2.77
PACRGL-221	ENST00000509469	FMN2	Q9NZ56	1722 aa		32.36	■■■□□ 2.77
PACRGL-221	ENST00000509469	SOS2	Q07890	1332 aa	Predicted RBP	32.35	■■■□□ 2.77
PACRGL-221	ENST00000509469	KDM2A	Q9Y2K7	1162 aa		32.35	■■■□□ 2.77
PACRGL-221	ENST00000509469	DCAF11	Q8TEB1	546 aa		32.34	■■■□□ 2.77
PACRGL-221	ENST00000509469	SIRT1	Q96EB6	747 aa		32.32	■■■□□ 2.76
PACRGL-221	ENST00000509469	ADGRB1	O14514	1584 aa		32.31	■■■□□ 2.76
PACRGL-221	ENST00000509469	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
PACRGL-221	ENST00000509469	ZNF772	Q68DY9	489 aa	Predicted RBP	32.29	■■■□□ 2.76
PACRGL-221	ENST00000509469	PRAM1	Q96QH2	718 aa		32.28	■■■□□ 2.76
PACRGL-221	ENST00000509469	NPHP3	Q7Z494	1330 aa		32.27	■■■□□ 2.76
PACRGL-221	ENST00000509469	DLC1	Q96QB1	1528 aa		32.27	■■■□□ 2.76
PACRGL-221	ENST00000509469	FOXO3	O43524	673 aa		32.26	■■■□□ 2.75
PACRGL-221	ENST00000509469	PXDN	Q92626	1479 aa		32.26	■■■□□ 2.75
PACRGL-221	ENST00000509469	RGPD8	O14715	1765 aa	Predicted RBP	32.25	■■■□□ 2.75
PACRGL-221	ENST00000509469	XPC	Q01831	940 aa	Predicted RBP	32.25	■■■□□ 2.75
PACRGL-221	ENST00000509469	AFF2	P51816	1311 aa		32.25	■■■□□ 2.75
PACRGL-221	ENST00000509469	C8orf37	Q96NL8	207 aa		32.23	■■■□□ 2.75
PACRGL-221	ENST00000509469	KIF1A	Q12756	1690 aa		32.22	■■■□□ 2.75
PACRGL-221	ENST00000509469	POGK	Q9P215	609 aa		32.22	■■■□□ 2.75
PACRGL-221	ENST00000509469	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.22	■■■□□ 2.75
PACRGL-221	ENST00000509469	ADAMTS2	O95450	1211 aa		32.21	■■■□□ 2.75
PACRGL-221	ENST00000509469	TRAK1	Q9UPV9	953 aa		32.21	■■■□□ 2.75
PACRGL-221	ENST00000509469	STAC3	Q96MF2	364 aa		32.2	■■■□□ 2.75
PACRGL-221	ENST00000509469	ADGRB2	O60241	1585 aa		32.16	■■■□□ 2.74
PACRGL-221	ENST00000509469	USP32	Q8NFA0	1604 aa		32.14	■■■□□ 2.74
PACRGL-221	ENST00000509469	NGLY1	Q96IV0	654 aa		32.13	■■■□□ 2.73
PACRGL-221	ENST00000509469	RXRB	P28702	533 aa		32.12	■■■□□ 2.73
PACRGL-221	ENST00000509469	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.12	■■■□□ 2.73
PACRGL-221	ENST00000509469	PHF8	Q9UPP1	1060 aa		32.12	■■■□□ 2.73
PACRGL-221	ENST00000509469	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.11	■■■□□ 2.73
PACRGL-221	ENST00000509469	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.11	■■■□□ 2.73
PACRGL-221	ENST00000509469	KRT28	Q7Z3Y7	464 aa		32.08	■■■□□ 2.73
PACRGL-221	ENST00000509469	MARF1	Q9Y4F3	1742 aa	Known RBP	32.07	■■■□□ 2.72
PACRGL-221	ENST00000509469	QTRT2	Q9H974	415 aa	Known RBP	32.07	■■■□□ 2.72
PACRGL-221	ENST00000509469	ANKAR	Q7Z5J8	1434 aa		32.07	■■■□□ 2.72
PACRGL-221	ENST00000509469	SPATA31A3	Q5VYP0	1347 aa		32.06	■■■□□ 2.72
PACRGL-221	ENST00000509469	KIAA1210	Q9ULL0	1709 aa		32.06	■■■□□ 2.72
PACRGL-221	ENST00000509469	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.03	■■■□□ 2.72
PACRGL-221	ENST00000509469	PMFBP1	Q8TBY8	1022 aa		32.02	■■■□□ 2.72
PACRGL-221	ENST00000509469	USP21	Q9UK80	565 aa		32.02	■■■□□ 2.72
PACRGL-221	ENST00000509469	TULP4	Q9NRJ4	1543 aa		32.01	■■■□□ 2.72
PACRGL-221	ENST00000509469	PRR36	Q9H6K5	1346 aa		32	■■■□□ 2.71
PACRGL-221	ENST00000509469	TNS3	Q68CZ2	1445 aa		32	■■■□□ 2.71
PACRGL-221	ENST00000509469	WASL	O00401	505 aa	Predicted RBP	31.99	■■■□□ 2.71
PACRGL-221	ENST00000509469	RBM6	P78332	1123 aa	Known RBP	31.99	■■■□□ 2.71
PACRGL-221	ENST00000509469	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.99	■■■□□ 2.71
PACRGL-221	ENST00000509469	EIF3A	Q14152	1382 aa	Known RBP	31.98	■■■□□ 2.71
PACRGL-221	ENST00000509469	PSME1	Q06323	249 aa		31.98	■■■□□ 2.71
PACRGL-221	ENST00000509469	RGS12	O14924	1447 aa		31.97	■■■□□ 2.71
PACRGL-221	ENST00000509469	NBPF1	Q3BBV0	1214 aa		31.96	■■■□□ 2.71
PACRGL-221	ENST00000509469	SBNO1	A3KN83	1393 aa		31.95	■■■□□ 2.71
PACRGL-221	ENST00000509469	SIN3A	Q96ST3	1273 aa		31.95	■■■□□ 2.71
PACRGL-221	ENST00000509469	PLEKHG5	O94827	1062 aa		31.94	■■■□□ 2.7
PACRGL-221	ENST00000509469	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.93	■■■□□ 2.7
PACRGL-221	ENST00000509469	LMOD2	Q6P5Q4	547 aa		31.93	■■■□□ 2.7
PACRGL-221	ENST00000509469	TRPC5	Q9UL62	973 aa	Predicted RBP	31.93	■■■□□ 2.7
PACRGL-221	ENST00000509469	ABCA3	Q99758	1704 aa		31.92	■■■□□ 2.7
PACRGL-221	ENST00000509469	ATRN	O75882	1429 aa		31.92	■■■□□ 2.7
PACRGL-221	ENST00000509469	BCL9L	Q86UU0	1499 aa		31.91	■■■□□ 2.7
PACRGL-221	ENST00000509469	CABLES1	Q8TDN4	633 aa		31.91	■■■□□ 2.7
PACRGL-221	ENST00000509469	L3MBTL2	Q969R5	705 aa		31.91	■■■□□ 2.7
PACRGL-221	ENST00000509469	ITSN1	Q15811	1721 aa		31.9	■■■□□ 2.7
PACRGL-221	ENST00000509469	ATP7B	P35670	1465 aa		31.9	■■■□□ 2.7
PACRGL-221	ENST00000509469	ARHGEF10	O15013	1369 aa		31.89	■■■□□ 2.7
PACRGL-221	ENST00000509469	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.88	■■■□□ 2.69
PACRGL-221	ENST00000509469	GPRASP1	Q5JY77	1395 aa		31.87	■■■□□ 2.69
PACRGL-221	ENST00000509469	HAP1	P54257	671 aa	Predicted RBP	31.87	■■■□□ 2.69
PACRGL-221	ENST00000509469	NEUROD1	Q13562	356 aa		31.87	■■■□□ 2.69
PACRGL-221	ENST00000509469	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.86	■■■□□ 2.69
PACRGL-221	ENST00000509469	ALS2	Q96Q42	1657 aa		31.86	■■■□□ 2.69
PACRGL-221	ENST00000509469	NUDT16	Q96DE0	195 aa	Known RBP	31.85	■■■□□ 2.69
PACRGL-221	ENST00000509469	NGDN	Q8NEJ9	315 aa	Known RBP	31.84	■■■□□ 2.69
PACRGL-221	ENST00000509469	CDK19	Q9BWU1	502 aa		31.84	■■■□□ 2.69
PACRGL-221	ENST00000509469	SLIT2	O94813	1529 aa		31.84	■■■□□ 2.69
PACRGL-221	ENST00000509469	TOPAZ1	Q8N9V7	1692 aa		31.82	■■■□□ 2.68
PACRGL-221	ENST00000509469	PLCH1	Q4KWH8	1693 aa		31.81	■■■□□ 2.68
PACRGL-221	ENST00000509469	TRPM1	Q7Z4N2	1603 aa		31.81	■■■□□ 2.68
PACRGL-221	ENST00000509469	QRICH2	Q9H0J4	1663 aa		31.79	■■■□□ 2.68
PACRGL-221	ENST00000509469	UNC5CL	Q8IV45	518 aa		31.78	■■■□□ 2.68
PACRGL-221	ENST00000509469	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.77	■■■□□ 2.68
PACRGL-221	ENST00000509469	PAK3	O75914	559 aa	Predicted RBP	31.76	■■■□□ 2.67
PACRGL-221	ENST00000509469	GJD4	Q96KN9	370 aa	Predicted RBP	31.76	■■■□□ 2.67
PACRGL-221	ENST00000509469	NWD2	Q9ULI1	1742 aa		31.75	■■■□□ 2.67
PACRGL-221	ENST00000509469	GLI3	P10071	1580 aa		31.74	■■■□□ 2.67
PACRGL-221	ENST00000509469	CRYBG1	Q9Y4K1	1723 aa		31.74	■■■□□ 2.67
PACRGL-221	ENST00000509469	RALGAPB	Q86X10	1494 aa		31.72	■■■□□ 2.67

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