RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 KNDC1Q76NI1 1749 aa20.85■□□□□ 0.93
RNF4-213ENST00000509388 ST20-MTHFSA0A0A6YYL1 179 aa20.85■□□□□ 0.93
RNF4-213ENST00000509388 ATF3P18847 181 aa20.85■□□□□ 0.93
RNF4-213ENST00000509388 HIRIP3Q9BW71 556 aaPredicted RBP20.84■□□□□ 0.93
RNF4-213ENST00000509388 SLC24A1O60721 1099 aa20.83■□□□□ 0.93
RNF4-213ENST00000509388 CADPS2Q86UW7 1296 aa20.82■□□□□ 0.92
RNF4-213ENST00000509388 ADGRL3Q9HAR2 1447 aa20.81■□□□□ 0.92
RNF4-213ENST00000509388 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
RNF4-213ENST00000509388 ARHGEF28Q8N1W1 1705 aaKnown RBP20.78■□□□□ 0.92
RNF4-213ENST00000509388 TOM1O60784 492 aa20.78■□□□□ 0.92
RNF4-213ENST00000509388 EVC2Q86UK5 1308 aa20.78■□□□□ 0.92
RNF4-213ENST00000509388 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
RNF4-213ENST00000509388 WASLO00401 505 aaPredicted RBP20.77■□□□□ 0.92
RNF4-213ENST00000509388 UBAP1LF5GYI3 381 aa20.76■□□□□ 0.91
RNF4-213ENST00000509388 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
RNF4-213ENST00000509388 TMF1P82094 1093 aa20.76■□□□□ 0.91
RNF4-213ENST00000509388 CDK19Q9BWU1 502 aa20.76■□□□□ 0.91
RNF4-213ENST00000509388 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
RNF4-213ENST00000509388 DCCP43146 1447 aa20.74■□□□□ 0.91
RNF4-213ENST00000509388 SBNO2Q9Y2G9 1366 aa20.73■□□□□ 0.91
RNF4-213ENST00000509388 TESK2Q96S53 571 aa20.73■□□□□ 0.91
RNF4-213ENST00000509388 SLAIN2Q9P270 581 aa20.73■□□□□ 0.91
RNF4-213ENST00000509388 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.73■□□□□ 0.91
RNF4-213ENST00000509388 CDCA8Q53HL2 280 aa20.72■□□□□ 0.91
RNF4-213ENST00000509388 CABP2Q9NPB3 220 aa20.71■□□□□ 0.91
RNF4-213ENST00000509388 SCAF1Q9H7N4 1312 aaKnown RBP20.71■□□□□ 0.91
RNF4-213ENST00000509388 QRICH2Q9H0J4 1663 aa20.7■□□□□ 0.91
RNF4-213ENST00000509388 NALCNQ8IZF0 1738 aa20.7■□□□□ 0.9
RNF4-213ENST00000509388 CDC42BPGQ6DT37 1551 aa20.69■□□□□ 0.9
RNF4-213ENST00000509388 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
RNF4-213ENST00000509388 XIRP1Q702N8 1843 aaKnown RBP20.69■□□□□ 0.9
RNF4-213ENST00000509388 ESCO1Q5FWF5 840 aa20.68■□□□□ 0.9
RNF4-213ENST00000509388 NUDT16Q96DE0 195 aaKnown RBP20.68■□□□□ 0.9
RNF4-213ENST00000509388 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
RNF4-213ENST00000509388 ADGRB2O60241 1585 aa20.67■□□□□ 0.9
RNF4-213ENST00000509388 C1orf167Q5SNV9 1468 aa20.65■□□□□ 0.9
RNF4-213ENST00000509388 MST1RQ04912 1400 aa20.65■□□□□ 0.9
RNF4-213ENST00000509388 PUS7Q96PZ0 661 aaKnown RBP20.65■□□□□ 0.9
RNF4-213ENST00000509388 CCDC61Q9Y6R9 512 aa20.65■□□□□ 0.9
RNF4-213ENST00000509388 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
RNF4-213ENST00000509388 ATAD2Q6PL18 1390 aa20.63■□□□□ 0.89
RNF4-213ENST00000509388 DISP3Q9P2K9 1392 aa20.63■□□□□ 0.89
RNF4-213ENST00000509388 TMC1Q8TDI8 760 aa20.63■□□□□ 0.89
RNF4-213ENST00000509388 ORAI2Q96SN7 254 aa20.63■□□□□ 0.89
RNF4-213ENST00000509388 TULP4Q9NRJ4 1543 aa20.63■□□□□ 0.89
RNF4-213ENST00000509388 PRR36Q9H6K5 1346 aa20.62■□□□□ 0.89
RNF4-213ENST00000509388 PHF8Q9UPP1 1060 aa20.62■□□□□ 0.89
RNF4-213ENST00000509388 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
RNF4-213ENST00000509388 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
RNF4-213ENST00000509388 PMFBP1Q8TBY8 1022 aa20.6■□□□□ 0.89
RNF4-213ENST00000509388 CABP1Q9NZU7 370 aa20.6■□□□□ 0.89
RNF4-213ENST00000509388 FMN2Q9NZ56 1722 aa20.59■□□□□ 0.89
RNF4-213ENST00000509388 ATP7BP35670 1465 aa20.57■□□□□ 0.88
RNF4-213ENST00000509388 PPIP5K1Q6PFW1 1433 aa20.57■□□□□ 0.88
RNF4-213ENST00000509388 PLEKHG3A1L390 1219 aa20.56■□□□□ 0.88
RNF4-213ENST00000509388 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
RNF4-213ENST00000509388 FOXO3O43524 673 aa20.56■□□□□ 0.88
RNF4-213ENST00000509388 PSME1Q06323 249 aa20.56■□□□□ 0.88
RNF4-213ENST00000509388 FBXO41Q8TF61 875 aa20.55■□□□□ 0.88
RNF4-213ENST00000509388 SLC12A5Q9H2X9 1139 aa20.55■□□□□ 0.88
RNF4-213ENST00000509388 KIF7Q2M1P5 1343 aa20.53■□□□□ 0.88
RNF4-213ENST00000509388 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
RNF4-213ENST00000509388 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
RNF4-213ENST00000509388 TERF2IPQ9NYB0 399 aa20.53■□□□□ 0.88
RNF4-213ENST00000509388 NINLQ9Y2I6 1382 aa20.53■□□□□ 0.88
RNF4-213ENST00000509388 ACEP12821 1306 aa20.53■□□□□ 0.88
RNF4-213ENST00000509388 DDX17Q92841 729 aaKnown RBP20.51■□□□□ 0.87
RNF4-213ENST00000509388 ZNF692Q9BU19 519 aaPredicted RBP20.51■□□□□ 0.87
RNF4-213ENST00000509388 USP32Q8NFA0 1604 aa20.51■□□□□ 0.87
RNF4-213ENST00000509388 KRT28Q7Z3Y7 464 aa20.5■□□□□ 0.87
RNF4-213ENST00000509388 WASHC2AQ641Q2 1341 aa20.5■□□□□ 0.87
RNF4-213ENST00000509388 CCDC7Q96M83 1385 aa20.49■□□□□ 0.87
RNF4-213ENST00000509388 XPCQ01831 940 aaPredicted RBP20.49■□□□□ 0.87
RNF4-213ENST00000509388 ROBO1Q9Y6N7 1651 aa20.48■□□□□ 0.87
RNF4-213ENST00000509388 ZNF316A6NFI3 1004 aaPredicted RBP20.48■□□□□ 0.87
RNF4-213ENST00000509388 ITSN1Q15811 1721 aa20.47■□□□□ 0.87
RNF4-213ENST00000509388 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
RNF4-213ENST00000509388 KIF1AQ12756 1690 aa20.47■□□□□ 0.87
RNF4-213ENST00000509388 POLR3AO14802 1390 aaPredicted RBP20.46■□□□□ 0.87
RNF4-213ENST00000509388 KTN1Q86UP2 1357 aaKnown RBP20.46■□□□□ 0.87
RNF4-213ENST00000509388 RGPD8O14715 1765 aaPredicted RBP20.45■□□□□ 0.86
RNF4-213ENST00000509388 LRRC59Q96AG4 307 aaKnown RBP20.45■□□□□ 0.86
RNF4-213ENST00000509388 HSPA1LP34931 641 aa20.44■□□□□ 0.86
RNF4-213ENST00000509388 LMOD2Q6P5Q4 547 aa20.44■□□□□ 0.86
RNF4-213ENST00000509388 SOS2Q07890 1332 aaPredicted RBP20.44■□□□□ 0.86
RNF4-213ENST00000509388 TOPAZ1Q8N9V7 1692 aa20.43■□□□□ 0.86
RNF4-213ENST00000509388 PANK3Q9H999 370 aa20.43■□□□□ 0.86
RNF4-213ENST00000509388 ANKRD36BQ8N2N9 1353 aa20.43■□□□□ 0.86
RNF4-213ENST00000509388 A0A1W2PP64 1363 aa20.42■□□□□ 0.86
RNF4-213ENST00000509388 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
RNF4-213ENST00000509388 CPSF1Q10570 1443 aaKnown RBP20.41■□□□□ 0.86
RNF4-213ENST00000509388 USP6P35125 1406 aa20.4■□□□□ 0.86
RNF4-213ENST00000509388 AHDC1Q5TGY3 1603 aaPredicted RBP20.39■□□□□ 0.86
RNF4-213ENST00000509388 SBNO1A3KN83 1393 aa20.39■□□□□ 0.85
RNF4-213ENST00000509388 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.39■□□□□ 0.85
RNF4-213ENST00000509388 TTC21BQ7Z4L5 1316 aa20.38■□□□□ 0.85
RNF4-213ENST00000509388 ABTB2Q8N961 1025 aa20.38■□□□□ 0.85
RNF4-213ENST00000509388 PXDNQ92626 1479 aa20.37■□□□□ 0.85
RNF4-213ENST00000509388 CD163L1Q9NR16 1453 aa20.37■□□□□ 0.85
RNF4-213ENST00000509388 SPATA31A3Q5VYP0 1347 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms