RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ABCC11Q96J66 1382 aa12.66□□□□□ -0.38
PDLIM5-213ENST00000509357 NALCNQ8IZF0 1738 aa12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 NUTM2FA1L443 756 aa12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 NUTM2BA6NNL0 878 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 NUTM2EB1AL46 878 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 SOCS7O14512 581 aa12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 ESCO1Q5FWF5 840 aa12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 NUTM2AQ8IVF1 878 aaPredicted RBP12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 DDX17Q92841 729 aaKnown RBP12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 POGKQ9P215 609 aa12.65□□□□□ -0.38
PDLIM5-213ENST00000509357 YTHDC2Q9H6S0 1430 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 SAFB2Q14151 953 aaKnown RBP eCLIP12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 ORAI2Q96SN7 254 aa12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 ARHGEF28Q8N1W1 1705 aaKnown RBP12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 C1orf167Q5SNV9 1468 aa12.64□□□□□ -0.39
PDLIM5-213ENST00000509357 SPATA31A6Q5VVP1 1343 aa12.62□□□□□ -0.39
PDLIM5-213ENST00000509357 PLEKHH1Q9ULM0 1364 aa12.62□□□□□ -0.39
PDLIM5-213ENST00000509357 NBPF1Q3BBV0 1214 aa12.62□□□□□ -0.39
PDLIM5-213ENST00000509357 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
PDLIM5-213ENST00000509357 TRAK1Q9UPV9 953 aa12.62□□□□□ -0.39
PDLIM5-213ENST00000509357 TECPR2O15040 1411 aa12.62□□□□□ -0.39
PDLIM5-213ENST00000509357 SIRT1Q96EB6 747 aa12.61□□□□□ -0.39
PDLIM5-213ENST00000509357 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
PDLIM5-213ENST00000509357 COL16A1Q07092 1604 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-213ENST00000509357 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
PDLIM5-213ENST00000509357 CLSPNQ9HAW4 1339 aa12.6□□□□□ -0.39
PDLIM5-213ENST00000509357 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-213ENST00000509357 FOXO3O43524 673 aa12.58□□□□□ -0.4
PDLIM5-213ENST00000509357 NPHP3Q7Z494 1330 aa12.58□□□□□ -0.4
PDLIM5-213ENST00000509357 TONSLQ96HA7 1378 aa12.57□□□□□ -0.4
PDLIM5-213ENST00000509357 XPCQ01831 940 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-213ENST00000509357 POTEAQ6S8J7 498 aa12.57□□□□□ -0.4
PDLIM5-213ENST00000509357 RALGAPBQ86X10 1494 aa12.57□□□□□ -0.4
PDLIM5-213ENST00000509357 DLC1Q96QB1 1528 aa12.57□□□□□ -0.4
PDLIM5-213ENST00000509357 ZNF772Q68DY9 489 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-213ENST00000509357 HIRIP3Q9BW71 556 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-213ENST00000509357 MINK1Q8N4C8 1332 aaPredicted RBP12.56□□□□□ -0.4
PDLIM5-213ENST00000509357 CDC42BPGQ6DT37 1551 aa12.56□□□□□ -0.4
PDLIM5-213ENST00000509357 ADAMTS2O95450 1211 aa12.55□□□□□ -0.4
PDLIM5-213ENST00000509357 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
PDLIM5-213ENST00000509357 GPRASP1Q5JY77 1395 aa12.55□□□□□ -0.4
PDLIM5-213ENST00000509357 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
PDLIM5-213ENST00000509357 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
PDLIM5-213ENST00000509357 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
PDLIM5-213ENST00000509357 RGPD8O14715 1765 aaPredicted RBP12.53□□□□□ -0.4
PDLIM5-213ENST00000509357 LRP6O75581 1613 aa12.53□□□□□ -0.4
PDLIM5-213ENST00000509357 NHSL1Q5SYE7 1610 aa12.53□□□□□ -0.4
PDLIM5-213ENST00000509357 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
PDLIM5-213ENST00000509357 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
PDLIM5-213ENST00000509357 QRICH2Q9H0J4 1663 aa12.53□□□□□ -0.4
PDLIM5-213ENST00000509357 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
PDLIM5-213ENST00000509357 PSME1Q06323 249 aa12.52□□□□□ -0.41
PDLIM5-213ENST00000509357 LMOD2Q6P5Q4 547 aa12.52□□□□□ -0.41
PDLIM5-213ENST00000509357 KRT28Q7Z3Y7 464 aa12.52□□□□□ -0.41
PDLIM5-213ENST00000509357 AFF2P51816 1311 aa12.52□□□□□ -0.41
PDLIM5-213ENST00000509357 ADGRB2O60241 1585 aa12.52□□□□□ -0.41
PDLIM5-213ENST00000509357 SHPRHQ149N8 1683 aa12.51□□□□□ -0.41
PDLIM5-213ENST00000509357 PLEKHG5O94827 1062 aa12.51□□□□□ -0.41
PDLIM5-213ENST00000509357 PMFBP1Q8TBY8 1022 aa12.51□□□□□ -0.41
PDLIM5-213ENST00000509357 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-213ENST00000509357 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
PDLIM5-213ENST00000509357 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
PDLIM5-213ENST00000509357 RXRBP28702 533 aa12.49□□□□□ -0.41
PDLIM5-213ENST00000509357 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
PDLIM5-213ENST00000509357 ROCK2O75116 1388 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-213ENST00000509357 NGDNQ8NEJ9 315 aaKnown RBP12.48□□□□□ -0.41
PDLIM5-213ENST00000509357 SPATA31A3Q5VYP0 1347 aa12.47□□□□□ -0.41
PDLIM5-213ENST00000509357 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
PDLIM5-213ENST00000509357 PXDNQ92626 1479 aa12.46□□□□□ -0.41
PDLIM5-213ENST00000509357 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
PDLIM5-213ENST00000509357 CDK19Q9BWU1 502 aa12.46□□□□□ -0.41
PDLIM5-213ENST00000509357 USP21Q9UK80 565 aa12.46□□□□□ -0.41
PDLIM5-213ENST00000509357 TOPAZ1Q8N9V7 1692 aa12.45□□□□□ -0.42
PDLIM5-213ENST00000509357 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
PDLIM5-213ENST00000509357 SRPK2P78362 688 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-213ENST00000509357 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
PDLIM5-213ENST00000509357 TIMELESSQ9UNS1 1208 aa12.45□□□□□ -0.42
PDLIM5-213ENST00000509357 PRR36Q9H6K5 1346 aa12.44□□□□□ -0.42
PDLIM5-213ENST00000509357 CENPJQ9HC77 1338 aaPredicted RBP12.44□□□□□ -0.42
PDLIM5-213ENST00000509357 KIF1AQ12756 1690 aa12.44□□□□□ -0.42
PDLIM5-213ENST00000509357 RBM6P78332 1123 aaKnown RBP12.43□□□□□ -0.42
PDLIM5-213ENST00000509357 CABLES1Q8TDN4 633 aa12.43□□□□□ -0.42
PDLIM5-213ENST00000509357 SBNO1A3KN83 1393 aa12.43□□□□□ -0.42
PDLIM5-213ENST00000509357 ATP7BP35670 1465 aa12.42□□□□□ -0.42
PDLIM5-213ENST00000509357 TRPC5Q9UL62 973 aaPredicted RBP12.42□□□□□ -0.42
PDLIM5-213ENST00000509357 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
PDLIM5-213ENST00000509357 ARHGEF10O15013 1369 aa12.42□□□□□ -0.42
PDLIM5-213ENST00000509357 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-213ENST00000509357 CARD11Q9BXL7 1154 aa12.41□□□□□ -0.42
PDLIM5-213ENST00000509357 CCDC61Q9Y6R9 512 aa12.41□□□□□ -0.42
PDLIM5-213ENST00000509357 TESK2Q96S53 571 aa12.4□□□□□ -0.42
PDLIM5-213ENST00000509357 CABP2Q9NPB3 220 aa12.4□□□□□ -0.42
PDLIM5-213ENST00000509357 USP47Q96K76 1375 aa12.4□□□□□ -0.42
PDLIM5-213ENST00000509357 COL22A1Q8NFW1 1626 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-213ENST00000509357 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
PDLIM5-213ENST00000509357 ACEP12821 1306 aa12.37□□□□□ -0.43
PDLIM5-213ENST00000509357 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
PDLIM5-213ENST00000509357 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms