RNA–Protein interactions for RNA: ENST00000508502.5

SEC31A-227, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC31A, Length 3,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-227ENST00000508502 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
SEC31A-227ENST00000508502 ABCC3O15438 1527 aa12.7□□□□□ -0.38
SEC31A-227ENST00000508502 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
SEC31A-227ENST00000508502 RRP7AQ9Y3A4 280 aaKnown RBP12.68□□□□□ -0.38
SEC31A-227ENST00000508502 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
SEC31A-227ENST00000508502 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
SEC31A-227ENST00000508502 VGFO15240 615 aaPredicted RBP12.67□□□□□ -0.38
SEC31A-227ENST00000508502 MTHFSP49914 203 aa12.67□□□□□ -0.38
SEC31A-227ENST00000508502 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
SEC31A-227ENST00000508502 RGS3P49796 1198 aa12.67□□□□□ -0.38
SEC31A-227ENST00000508502 CANXP27824 592 aaKnown RBP12.67□□□□□ -0.38
SEC31A-227ENST00000508502 EVC2Q86UK5 1308 aa12.67□□□□□ -0.38
SEC31A-227ENST00000508502 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
SEC31A-227ENST00000508502 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
SEC31A-227ENST00000508502 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
SEC31A-227ENST00000508502 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
SEC31A-227ENST00000508502 FAM161AQ3B820 660 aa12.66□□□□□ -0.38
SEC31A-227ENST00000508502 CFAP53Q96M91 514 aa12.66□□□□□ -0.38
SEC31A-227ENST00000508502 SHPRHQ149N8 1683 aa12.66□□□□□ -0.38
SEC31A-227ENST00000508502 SAFB2Q14151 953 aaKnown RBP eCLIP12.65□□□□□ -0.38
SEC31A-227ENST00000508502 GLI2P10070 1586 aa12.65□□□□□ -0.38
SEC31A-227ENST00000508502 SIGLEC1Q9BZZ2 1709 aa12.65□□□□□ -0.38
SEC31A-227ENST00000508502 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
SEC31A-227ENST00000508502 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
SEC31A-227ENST00000508502 C8orf34Q49A92 452 aa12.64□□□□□ -0.39
SEC31A-227ENST00000508502 PANK1Q8TE04 598 aa12.64□□□□□ -0.39
SEC31A-227ENST00000508502 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
SEC31A-227ENST00000508502 IDI1Q13907 227 aa12.64□□□□□ -0.39
SEC31A-227ENST00000508502 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 NEO1Q92859 1461 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 IGHDP01880 384 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 STK26Q9P289 416 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 TULP4Q9NRJ4 1543 aa12.63□□□□□ -0.39
SEC31A-227ENST00000508502 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
SEC31A-227ENST00000508502 USP32Q8NFA0 1604 aa12.62□□□□□ -0.39
SEC31A-227ENST00000508502 NEFMP07197 916 aa12.62□□□□□ -0.39
SEC31A-227ENST00000508502 PIK3C2BO00750 1634 aa12.62□□□□□ -0.39
SEC31A-227ENST00000508502 IQSEC2Q5JU85 1478 aa12.62□□□□□ -0.39
SEC31A-227ENST00000508502 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
SEC31A-227ENST00000508502 DIP2CQ9Y2E4 1556 aa12.62□□□□□ -0.39
SEC31A-227ENST00000508502 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
SEC31A-227ENST00000508502 U2AF1L5P0DN76 240 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-227ENST00000508502 RARSP54136 660 aaKnown RBP12.61□□□□□ -0.39
SEC31A-227ENST00000508502 U2AF1Q01081 240 aaKnown RBP eCLIP12.61□□□□□ -0.392e-7■■□□□ 14.3
SEC31A-227ENST00000508502 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
SEC31A-227ENST00000508502 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
SEC31A-227ENST00000508502 PHF23Q9BUL5 403 aaPredicted RBP12.61□□□□□ -0.39
SEC31A-227ENST00000508502 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
SEC31A-227ENST00000508502 NSD2O96028 1365 aa12.6□□□□□ -0.39
SEC31A-227ENST00000508502 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
SEC31A-227ENST00000508502 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
SEC31A-227ENST00000508502 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
SEC31A-227ENST00000508502 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
SEC31A-227ENST00000508502 ARHGAP31Q2M1Z3 1444 aa12.59□□□□□ -0.39
SEC31A-227ENST00000508502 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
SEC31A-227ENST00000508502 CCDC27Q2M243 656 aa12.59□□□□□ -0.39
SEC31A-227ENST00000508502 YEATS2Q9ULM3 1422 aa12.58□□□□□ -0.4
SEC31A-227ENST00000508502 A0A1W2PP64 1363 aa12.57□□□□□ -0.4
SEC31A-227ENST00000508502 GGNBP2Q9H3C7 697 aa12.57□□□□□ -0.4
SEC31A-227ENST00000508502 USP35Q9P2H5 1018 aa12.57□□□□□ -0.4
SEC31A-227ENST00000508502 TNNQ9UQP3 1299 aa12.57□□□□□ -0.4
SEC31A-227ENST00000508502 MYH16Q9H6N6 1097 aa12.57□□□□□ -0.4
SEC31A-227ENST00000508502 MINK1Q8N4C8 1332 aaPredicted RBP12.57□□□□□ -0.4
SEC31A-227ENST00000508502 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
SEC31A-227ENST00000508502 RLBP1P12271 317 aa12.56□□□□□ -0.4
SEC31A-227ENST00000508502 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
SEC31A-227ENST00000508502 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
SEC31A-227ENST00000508502 POGKQ9P215 609 aa12.56□□□□□ -0.4
SEC31A-227ENST00000508502 ABCC11Q96J66 1382 aa12.56□□□□□ -0.4
SEC31A-227ENST00000508502 RICTORQ6R327 1708 aa12.55□□□□□ -0.4
SEC31A-227ENST00000508502 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
SEC31A-227ENST00000508502 PMFBP1Q8TBY8 1022 aa12.54□□□□□ -0.4
SEC31A-227ENST00000508502 TERF2IPQ9NYB0 399 aa12.54□□□□□ -0.4
SEC31A-227ENST00000508502 MYO5BQ9ULV0 1848 aa12.54□□□□□ -0.4
SEC31A-227ENST00000508502 FBXO31Q5XUX0 539 aaPredicted RBP12.54□□□□□ -0.4
SEC31A-227ENST00000508502 PCDHB15Q9Y5E8 787 aa12.54□□□□□ -0.4
SEC31A-227ENST00000508502 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
SEC31A-227ENST00000508502 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
SEC31A-227ENST00000508502 TSR2Q969E8 191 aaKnown RBP12.53□□□□□ -0.4
SEC31A-227ENST00000508502 PTPRMP28827 1452 aa12.53□□□□□ -0.4
SEC31A-227ENST00000508502 FYB1O15117 783 aa12.53□□□□□ -0.4
SEC31A-227ENST00000508502 AAMPQ13685 434 aa12.53□□□□□ -0.4
SEC31A-227ENST00000508502 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.4
SEC31A-227ENST00000508502 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.41
SEC31A-227ENST00000508502 PREX1Q8TCU6 1659 aa12.52□□□□□ -0.41
SEC31A-227ENST00000508502 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
SEC31A-227ENST00000508502 TMPOP42166 694 aaKnown RBP12.51□□□□□ -0.41
SEC31A-227ENST00000508502 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
SEC31A-227ENST00000508502 ADGRB2O60241 1585 aa12.51□□□□□ -0.41
SEC31A-227ENST00000508502 NFKBIBQ15653 356 aa12.5□□□□□ -0.41
SEC31A-227ENST00000508502 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
SEC31A-227ENST00000508502 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
SEC31A-227ENST00000508502 HDGFL2Q7Z4V5 671 aaPredicted RBP12.5□□□□□ -0.41
SEC31A-227ENST00000508502 FTSJ3Q8IY81 847 aaKnown RBP12.5□□□□□ -0.41
SEC31A-227ENST00000508502 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
SEC31A-227ENST00000508502 SEC24BO95487 1268 aa12.5□□□□□ -0.41
SEC31A-227ENST00000508502 MVPQ14764 893 aaKnown RBP12.49□□□□□ -0.41
SEC31A-227ENST00000508502 RWDD1Q9H446 243 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms