RNA–Protein interactions for RNA: ENST00000507653.1

AC008539.1-201, humanhuman

TSL 3 BASIC

Gene AC008539.1, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008539.1-201ENST00000507653 BMP1P13497 986 aa8.39□□□□□ -1.07
AC008539.1-201ENST00000507653 PUS10Q3MIT2 529 aaKnown RBP8.39□□□□□ -1.07
AC008539.1-201ENST00000507653 PAXIP1Q6ZW49 1069 aaPredicted RBP8.39□□□□□ -1.07
AC008539.1-201ENST00000507653 IGHA1P01876 353 aa8.37□□□□□ -1.07
AC008539.1-201ENST00000507653 RNF225M0QZC1 329 aaPredicted RBP8.36□□□□□ -1.07
AC008539.1-201ENST00000507653 FAM160A2Q8N612 972 aaPredicted RBP8.35□□□□□ -1.07
AC008539.1-201ENST00000507653 CFAP44Q96MT7 982 aa8.35□□□□□ -1.07
AC008539.1-201ENST00000507653 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
AC008539.1-201ENST00000507653 ZBTB24O43167 697 aaPredicted RBP8.34□□□□□ -1.07
AC008539.1-201ENST00000507653 THAP11Q96EK4 314 aa8.34□□□□□ -1.07
AC008539.1-201ENST00000507653 PRDM9Q9NQV7 894 aa8.34□□□□□ -1.07
AC008539.1-201ENST00000507653 TRIM32Q13049 653 aa8.33□□□□□ -1.08
AC008539.1-201ENST00000507653 ADAMTS8Q9UP79 889 aa8.32□□□□□ -1.08
AC008539.1-201ENST00000507653 ADAM23O75077 832 aa8.31□□□□□ -1.08
AC008539.1-201ENST00000507653 E2F4Q16254 413 aa8.29□□□□□ -1.08
AC008539.1-201ENST00000507653 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
AC008539.1-201ENST00000507653 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
AC008539.1-201ENST00000507653 ZFP42Q96MM3 310 aa8.27□□□□□ -1.09
AC008539.1-201ENST00000507653 CAPN5O15484 640 aaPredicted RBP8.26□□□□□ -1.09
AC008539.1-201ENST00000507653 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
AC008539.1-201ENST00000507653 FOXK2Q01167 660 aa8.25□□□□□ -1.09
AC008539.1-201ENST00000507653 MORN1Q5T089 497 aa8.25□□□□□ -1.09
AC008539.1-201ENST00000507653 LCE3BQ5TA77 95 aa8.24□□□□□ -1.09
AC008539.1-201ENST00000507653 ADGRG1Q9Y653 693 aa8.24□□□□□ -1.09
AC008539.1-201ENST00000507653 IRS1P35568 1242 aa8.23□□□□□ -1.09
AC008539.1-201ENST00000507653 SKOR1P84550 965 aa8.23□□□□□ -1.09
AC008539.1-201ENST00000507653 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
AC008539.1-201ENST00000507653 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
AC008539.1-201ENST00000507653 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
AC008539.1-201ENST00000507653 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
AC008539.1-201ENST00000507653 ALDH1A1P00352 501 aa8.22□□□□□ -1.09
AC008539.1-201ENST00000507653 KRT76Q01546 638 aa8.21□□□□□ -1.1
AC008539.1-201ENST00000507653 SOBPA7XYQ1 873 aa8.2□□□□□ -1.1
AC008539.1-201ENST00000507653 FAM161AQ3B820 660 aa8.19□□□□□ -1.1
AC008539.1-201ENST00000507653 MSS51Q4VC12 460 aa8.19□□□□□ -1.1
AC008539.1-201ENST00000507653 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
AC008539.1-201ENST00000507653 Q8N3U1 123 aa8.19□□□□□ -1.1
AC008539.1-201ENST00000507653 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
AC008539.1-201ENST00000507653 BRICD5Q6PL45 260 aa8.18□□□□□ -1.1
AC008539.1-201ENST00000507653 KRTAP4-12Q9BQ66 201 aa8.18□□□□□ -1.1
AC008539.1-201ENST00000507653 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
AC008539.1-201ENST00000507653 FECHP22830 423 aa8.16□□□□□ -1.1
AC008539.1-201ENST00000507653 ZNF385CQ66K41 422 aaPredicted RBP8.16□□□□□ -1.1
AC008539.1-201ENST00000507653 KRTAP9-9Q9BYP9 154 aa8.16□□□□□ -1.1
AC008539.1-201ENST00000507653 KRTAP9-4Q9BYQ2 154 aa8.16□□□□□ -1.1
AC008539.1-201ENST00000507653 SIAH2O43255 324 aa8.15□□□□□ -1.1
AC008539.1-201ENST00000507653 HAP1P54257 671 aaPredicted RBP8.15□□□□□ -1.1
AC008539.1-201ENST00000507653 WNT7BP56706 349 aa8.15□□□□□ -1.1
AC008539.1-201ENST00000507653 FUT2Q10981 343 aa8.15□□□□□ -1.1
AC008539.1-201ENST00000507653 KANK3Q6NY19 840 aa8.15□□□□□ -1.1
AC008539.1-201ENST00000507653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.14□□□□□ -1.11
AC008539.1-201ENST00000507653 RNF19BQ6ZMZ0 732 aa8.14□□□□□ -1.11
AC008539.1-201ENST00000507653 P3H3Q8IVL6 736 aa8.14□□□□□ -1.11
AC008539.1-201ENST00000507653 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
AC008539.1-201ENST00000507653 MMP16P51512 607 aa8.13□□□□□ -1.11
AC008539.1-201ENST00000507653 ARHGEF1Q92888 912 aaKnown RBP8.13□□□□□ -1.11
AC008539.1-201ENST00000507653 PTGDRQ13258 359 aa8.12□□□□□ -1.11
AC008539.1-201ENST00000507653 CNTNAP3BQ96NU0 1288 aa8.12□□□□□ -1.11
AC008539.1-201ENST00000507653 CNTNAP3Q9BZ76 1288 aa8.12□□□□□ -1.11
AC008539.1-201ENST00000507653 MSTNO14793 375 aa8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 ARHGEF15O94989 841 aa8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 ITGB2P05107 769 aa8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 ATP6V1AP38606 617 aa8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 MRPL14Q6P1L8 145 aaKnown RBP8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 GPR161Q8N6U8 529 aaKnown RBP8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 SPOCK3Q9BQ16 436 aa8.11□□□□□ -1.11
AC008539.1-201ENST00000507653 PURBQ96QR8 312 aaKnown RBP8.1□□□□□ -1.11
AC008539.1-201ENST00000507653 KRTAP4-8A0A0G2JLE6 195 aa8.09□□□□□ -1.11
AC008539.1-201ENST00000507653 SVOPQ8N4V2 548 aa8.09□□□□□ -1.11
AC008539.1-201ENST00000507653 WHAMMQ8TF30 809 aa8.09□□□□□ -1.11
AC008539.1-201ENST00000507653 WASF2Q9Y6W5 498 aa8.09□□□□□ -1.11
AC008539.1-201ENST00000507653 PLA2G4EQ3MJ16 856 aa8.08□□□□□ -1.12
AC008539.1-201ENST00000507653 RSPH4AQ5TD94 716 aa8.08□□□□□ -1.12
AC008539.1-201ENST00000507653 KDM2AQ9Y2K7 1162 aa8.08□□□□□ -1.12
AC008539.1-201ENST00000507653 PROCP04070 461 aa8.06□□□□□ -1.12
AC008539.1-201ENST00000507653 DXOO77932 396 aaKnown RBP8.05□□□□□ -1.12
AC008539.1-201ENST00000507653 SCARF1Q14162 830 aa8.05□□□□□ -1.12
AC008539.1-201ENST00000507653 PXYLP1Q8TE99 480 aa8.05□□□□□ -1.12
AC008539.1-201ENST00000507653 K7ELQ4 463 aaPredicted RBP8.03□□□□□ -1.12
AC008539.1-201ENST00000507653 SLC24A1O60721 1099 aa8.03□□□□□ -1.12
AC008539.1-201ENST00000507653 MARSP56192 900 aaKnown RBP8.03□□□□□ -1.12
AC008539.1-201ENST00000507653 KCNV2Q8TDN2 545 aa8.03□□□□□ -1.12
AC008539.1-201ENST00000507653 SCARF2Q96GP6 870 aaPredicted RBP8.03□□□□□ -1.12
AC008539.1-201ENST00000507653 EHBP1Q8NDI1 1231 aa8.02□□□□□ -1.13
AC008539.1-201ENST00000507653 COL25A1Q9BXS0 654 aaPredicted RBP8.02□□□□□ -1.13
AC008539.1-201ENST00000507653 MAN1A2O60476 641 aa8.01□□□□□ -1.13
AC008539.1-201ENST00000507653 SLURP2P0DP57 97 aa8.01□□□□□ -1.13
AC008539.1-201ENST00000507653 RNFT1Q5M7Z0 435 aa8.01□□□□□ -1.13
AC008539.1-201ENST00000507653 CCDC24Q8N4L8 307 aa8.01□□□□□ -1.13
AC008539.1-201ENST00000507653 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
AC008539.1-201ENST00000507653 BTBD11A6QL63 1104 aa8□□□□□ -1.13
AC008539.1-201ENST00000507653 SMYD5Q6GMV2 418 aa8□□□□□ -1.13
AC008539.1-201ENST00000507653 TIMP2P16035 220 aa7.99□□□□□ -1.13
AC008539.1-201ENST00000507653 GCGRP47871 477 aa7.99□□□□□ -1.13
AC008539.1-201ENST00000507653 DCAF5Q96JK2 942 aa7.98□□□□□ -1.13
AC008539.1-201ENST00000507653 NUTM2FA1L443 756 aa7.95□□□□□ -1.14
AC008539.1-201ENST00000507653 OATP04181 439 aa7.95□□□□□ -1.14
AC008539.1-201ENST00000507653 NNTQ13423 1086 aa7.95□□□□□ -1.14
AC008539.1-201ENST00000507653 METTL3Q86U44 580 aaKnown RBP7.95□□□□□ -1.14
AC008539.1-201ENST00000507653 GALNT6Q8NCL4 622 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms