RNA–Protein interactions for RNA: ENST00000507528.5

PDCD6-206, Transcript of programmed cell death 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDCD6, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-206ENST00000507528 CDC42BPGQ6DT37 1551 aa28.84■■■□□ 2.21
PDCD6-206ENST00000507528 TRPC5Q9UL62 973 aaPredicted RBP28.84■■■□□ 2.21
PDCD6-206ENST00000507528 ATAD2Q6PL18 1390 aa28.84■■■□□ 2.21
PDCD6-206ENST00000507528 EP400Q96L91 3159 aa28.84■■■□□ 2.21
PDCD6-206ENST00000507528 MARF1Q9Y4F3 1742 aaKnown RBP28.83■■■□□ 2.21
PDCD6-206ENST00000507528 ATRNO75882 1429 aa28.82■■■□□ 2.2
PDCD6-206ENST00000507528 MYOM2P54296 1465 aa28.82■■■□□ 2.2
PDCD6-206ENST00000507528 PXDNQ92626 1479 aa28.8■■■□□ 2.2
PDCD6-206ENST00000507528 NPHP3Q7Z494 1330 aa28.78■■■□□ 2.2
PDCD6-206ENST00000507528 SLC4A1APQ9BWU0 796 aaKnown RBP28.77■■■□□ 2.2
PDCD6-206ENST00000507528 BCL9LQ86UU0 1499 aa28.75■■■□□ 2.19
PDCD6-206ENST00000507528 ESCO1Q5FWF5 840 aa28.75■■■□□ 2.19
PDCD6-206ENST00000507528 TECPR2O15040 1411 aa28.73■■■□□ 2.19
PDCD6-206ENST00000507528 IFT172Q9UG01 1749 aa28.72■■■□□ 2.19
PDCD6-206ENST00000507528 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.71■■■□□ 2.19
PDCD6-206ENST00000507528 KNDC1Q76NI1 1749 aa28.7■■■□□ 2.19
PDCD6-206ENST00000507528 FOXO3O43524 673 aa28.7■■■□□ 2.18
PDCD6-206ENST00000507528 ADGRF5Q8IZF2 1346 aa28.69■■■□□ 2.18
PDCD6-206ENST00000507528 LRPPRCP42704 1394 aaKnown RBP28.68■■■□□ 2.18
PDCD6-206ENST00000507528 XPCQ01831 940 aaPredicted RBP28.66■■■□□ 2.18
PDCD6-206ENST00000507528 SPATA31E1Q6ZUB1 1445 aa28.66■■■□□ 2.18
PDCD6-206ENST00000507528 FMN2Q9NZ56 1722 aa28.66■■■□□ 2.18
PDCD6-206ENST00000507528 WAPLQ7Z5K2 1190 aa28.65■■■□□ 2.18
PDCD6-206ENST00000507528 ABCC11Q96J66 1382 aa28.64■■■□□ 2.18
PDCD6-206ENST00000507528 FOXD1Q16676 465 aa28.64■■■□□ 2.18
PDCD6-206ENST00000507528 CCDC125Q86Z20 511 aa28.64■■■□□ 2.18
PDCD6-206ENST00000507528 GJD4Q96KN9 370 aaPredicted RBP28.64■■■□□ 2.18
PDCD6-206ENST00000507528 CCDC144AA2RUR9 1427 aa28.63■■■□□ 2.17
PDCD6-206ENST00000507528 KIF1AQ12756 1690 aa28.63■■■□□ 2.17
PDCD6-206ENST00000507528 ANKRD30BQ9BXX2 1392 aa28.62■■■□□ 2.17
PDCD6-206ENST00000507528 STK26Q9P289 416 aa28.62■■■□□ 2.17
PDCD6-206ENST00000507528 ZRANB1Q9UGI0 708 aa28.62■■■□□ 2.17
PDCD6-206ENST00000507528 SLIT2O94813 1529 aa28.61■■■□□ 2.17
PDCD6-206ENST00000507528 NUTM2FA1L443 756 aa28.61■■■□□ 2.17
PDCD6-206ENST00000507528 PLEKHH1Q9ULM0 1364 aa28.61■■■□□ 2.17
PDCD6-206ENST00000507528 GLI3P10071 1580 aa28.6■■■□□ 2.17
PDCD6-206ENST00000507528 PIK3C2GO75747 1445 aa28.6■■■□□ 2.17
PDCD6-206ENST00000507528 RGL3Q3MIN7 710 aa28.59■■■□□ 2.17
PDCD6-206ENST00000507528 SPATA31A3Q5VYP0 1347 aa28.59■■■□□ 2.17
PDCD6-206ENST00000507528 TMEM132EQ6IEE7 984 aa28.57■■■□□ 2.16
PDCD6-206ENST00000507528 UNC5CLQ8IV45 518 aa28.57■■■□□ 2.16
PDCD6-206ENST00000507528 RALGAPBQ86X10 1494 aa28.57■■■□□ 2.16
PDCD6-206ENST00000507528 USP32Q8NFA0 1604 aa28.57■■■□□ 2.16
PDCD6-206ENST00000507528 RGPD8O14715 1765 aaPredicted RBP28.56■■■□□ 2.16
PDCD6-206ENST00000507528 BRWD3Q6RI45 1802 aa28.55■■■□□ 2.16
PDCD6-206ENST00000507528 YTHDC2Q9H6S0 1430 aaKnown RBP28.55■■■□□ 2.16
PDCD6-206ENST00000507528 KRT28Q7Z3Y7 464 aa28.51■■■□□ 2.15
PDCD6-206ENST00000507528 SIRT1Q96EB6 747 aa28.51■■■□□ 2.15
PDCD6-206ENST00000507528 MPHOSPH9Q99550 1183 aa28.5■■■□□ 2.15
PDCD6-206ENST00000507528 BLMP54132 1417 aaPredicted RBP28.5■■■□□ 2.15
PDCD6-206ENST00000507528 NWD2Q9ULI1 1742 aa28.49■■■□□ 2.15
PDCD6-206ENST00000507528 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
PDCD6-206ENST00000507528 PLCH1Q4KWH8 1693 aa28.48■■■□□ 2.15
PDCD6-206ENST00000507528 ABCA3Q99758 1704 aa28.47■■■□□ 2.15
PDCD6-206ENST00000507528 C14orf93Q9H972 538 aaKnown RBP28.45■■■□□ 2.14
PDCD6-206ENST00000507528 PHF8Q9UPP1 1060 aa28.45■■■□□ 2.14
PDCD6-206ENST00000507528 NRXN1Q9ULB1 1477 aa28.45■■■□□ 2.14
PDCD6-206ENST00000507528 PSME1Q06323 249 aa28.43■■■□□ 2.14
PDCD6-206ENST00000507528 VPS72Q15906 364 aa28.42■■■□□ 2.14
PDCD6-206ENST00000507528 SBNO1A3KN83 1393 aa28.41■■■□□ 2.14
PDCD6-206ENST00000507528 ONECUT3O60422 494 aaPredicted RBP28.4■■■□□ 2.14
PDCD6-206ENST00000507528 SEPT12Q8IYM1 358 aa28.4■■■□□ 2.14
PDCD6-206ENST00000507528 CABLES1Q8TDN4 633 aa28.4■■■□□ 2.14
PDCD6-206ENST00000507528 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
PDCD6-206ENST00000507528 HAP1P54257 671 aaPredicted RBP28.39■■■□□ 2.14
PDCD6-206ENST00000507528 DEFB132Q7Z7B7 95 aa28.38■■■□□ 2.13
PDCD6-206ENST00000507528 ARHGEF10O15013 1369 aa28.37■■■□□ 2.13
PDCD6-206ENST00000507528 CFAP70Q5T0N1 1121 aa28.37■■■□□ 2.13
PDCD6-206ENST00000507528 DLC1Q96QB1 1528 aa28.35■■■□□ 2.13
PDCD6-206ENST00000507528 ADGRB2O60241 1585 aa28.34■■■□□ 2.13
PDCD6-206ENST00000507528 PRAM1Q96QH2 718 aa28.34■■■□□ 2.13
PDCD6-206ENST00000507528 NRAPQ86VF7 1730 aa28.34■■■□□ 2.13
PDCD6-206ENST00000507528 ANKARQ7Z5J8 1434 aa28.34■■■□□ 2.13
PDCD6-206ENST00000507528 TRPM3Q9HCF6 1732 aaPredicted RBP28.33■■■□□ 2.13
PDCD6-206ENST00000507528 SF3B2Q13435 895 aaKnown RBP28.33■■■□□ 2.13
PDCD6-206ENST00000507528 KRT27Q7Z3Y8 459 aa28.31■■■□□ 2.12
PDCD6-206ENST00000507528 ALS2Q96Q42 1657 aa28.3■■■□□ 2.12
PDCD6-206ENST00000507528 LRP5O75197 1615 aa28.3■■■□□ 2.12
PDCD6-206ENST00000507528 FAM83GA6ND36 823 aa28.3■■■□□ 2.12
PDCD6-206ENST00000507528 PLEKHG5O94827 1062 aa28.3■■■□□ 2.12
PDCD6-206ENST00000507528 SAFB2Q14151 953 aaKnown RBP eCLIP28.3■■■□□ 2.123e-8■■□□□ 13.6
PDCD6-206ENST00000507528 LMOD2Q6P5Q4 547 aa28.3■■■□□ 2.12
PDCD6-206ENST00000507528 CCDC9Q9Y3X0 531 aaKnown RBP28.3■■■□□ 2.12
PDCD6-206ENST00000507528 ACIN1Q9UKV3 1341 aaKnown RBP28.29■■■□□ 2.12
PDCD6-206ENST00000507528 PMFBP1Q8TBY8 1022 aa28.28■■■□□ 2.12
PDCD6-206ENST00000507528 ADGRB1O14514 1584 aa28.27■■■□□ 2.12
PDCD6-206ENST00000507528 COL14A1Q05707 1796 aaKnown RBP28.26■■■□□ 2.11
PDCD6-206ENST00000507528 POGKQ9P215 609 aa28.25■■■□□ 2.11
PDCD6-206ENST00000507528 CRYBG1Q9Y4K1 1723 aa28.23■■■□□ 2.11
PDCD6-206ENST00000507528 BTG4Q9NY30 223 aa28.21■■■□□ 2.11
PDCD6-206ENST00000507528 TULP4Q9NRJ4 1543 aa28.2■■■□□ 2.1
PDCD6-206ENST00000507528 FAM98CQ17RN3 349 aaKnown RBP28.2■■■□□ 2.1
PDCD6-206ENST00000507528 RGPD1P0DJD0 1748 aa28.19■■■□□ 2.1
PDCD6-206ENST00000507528 BAG6P46379 1132 aa28.19■■■□□ 2.1
PDCD6-206ENST00000507528 GPRASP1Q5JY77 1395 aa28.19■■■□□ 2.1
PDCD6-206ENST00000507528 PRR36Q9H6K5 1346 aa28.18■■■□□ 2.1
PDCD6-206ENST00000507528 EIF3AQ14152 1382 aaKnown RBP28.18■■■□□ 2.1
PDCD6-206ENST00000507528 A0A0G2JS52 829 aa28.17■■■□□ 2.1
PDCD6-206ENST00000507528 MYT1Q01538 1121 aa28.17■■■□□ 2.1
PDCD6-206ENST00000507528 HIRIP3Q9BW71 556 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms