RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 CABP4P57796 275 aa12.04□□□□□ -0.48
NEK1-203ENST00000507142 LRRC59Q96AG4 307 aaKnown RBP12.04□□□□□ -0.48
NEK1-203ENST00000507142 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
NEK1-203ENST00000507142 ISY1Q9ULR0 285 aaKnown RBP12.03□□□□□ -0.48
NEK1-203ENST00000507142 CFAP74Q9C0B2 1584 aa12.03□□□□□ -0.48
NEK1-203ENST00000507142 NBPF8Q3BBV2 869 aa12.03□□□□□ -0.48
NEK1-203ENST00000507142 APBB1O00213 710 aa12.03□□□□□ -0.48
NEK1-203ENST00000507142 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
NEK1-203ENST00000507142 HDAC5Q9UQL6 1122 aa12.03□□□□□ -0.48
NEK1-203ENST00000507142 RIPK4P57078 832 aa12.03□□□□□ -0.48
NEK1-203ENST00000507142 SMC4Q9NTJ3 1288 aa12.03□□□□□ -0.48
NEK1-203ENST00000507142 MTHFSP49914 203 aa12.02□□□□□ -0.48
NEK1-203ENST00000507142 GTF3C3Q9Y5Q9 886 aa12.02□□□□□ -0.48
NEK1-203ENST00000507142 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
NEK1-203ENST00000507142 CHRNA2Q15822 529 aa12.02□□□□□ -0.49
NEK1-203ENST00000507142 NEXNQ0ZGT2 675 aa12.01□□□□□ -0.49
NEK1-203ENST00000507142 ZNF530Q6P9A1 599 aaPredicted RBP12.01□□□□□ -0.49
NEK1-203ENST00000507142 ABCA8O94911 1581 aa12.01□□□□□ -0.49
NEK1-203ENST00000507142 TSPYL4Q9UJ04 414 aa12.01□□□□□ -0.49
NEK1-203ENST00000507142 TBX22Q9Y458 520 aa12.01□□□□□ -0.49
NEK1-203ENST00000507142 ZCCHC11Q5TAX3 1644 aaKnown RBP12.01□□□□□ -0.49
NEK1-203ENST00000507142 GAS2L2Q8NHY3 880 aa12□□□□□ -0.49
NEK1-203ENST00000507142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12□□□□□ -0.49
NEK1-203ENST00000507142 CASC1Q6TDU7 716 aa12□□□□□ -0.49
NEK1-203ENST00000507142 FAM177BA6PVY3 158 aa12□□□□□ -0.49
NEK1-203ENST00000507142 EXOC5O00471 708 aa12□□□□□ -0.49
NEK1-203ENST00000507142 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
NEK1-203ENST00000507142 ITPRIPQ8IWB1 547 aa12□□□□□ -0.49
NEK1-203ENST00000507142 SULT6B1Q6IMI4 303 aa11.99□□□□□ -0.49
NEK1-203ENST00000507142 WASHC2AQ641Q2 1341 aa11.99□□□□□ -0.49
NEK1-203ENST00000507142 SAMD9Q5K651 1589 aa11.98□□□□□ -0.49
NEK1-203ENST00000507142 CCER2I3L3R5 266 aa11.98□□□□□ -0.49
NEK1-203ENST00000507142 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
NEK1-203ENST00000507142 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
NEK1-203ENST00000507142 NME9Q86XW9 330 aa11.98□□□□□ -0.49
NEK1-203ENST00000507142 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
NEK1-203ENST00000507142 DDX58O95786 925 aaKnown RBP11.97□□□□□ -0.49
NEK1-203ENST00000507142 TAOK2Q9UL54 1235 aa11.97□□□□□ -0.49
NEK1-203ENST00000507142 ACEP12821 1306 aa11.97□□□□□ -0.49
NEK1-203ENST00000507142 HSP90AB1P08238 724 aaKnown RBP11.97□□□□□ -0.49
NEK1-203ENST00000507142 CABLES1Q8TDN4 633 aa11.97□□□□□ -0.49
NEK1-203ENST00000507142 KCNJ4P48050 445 aa11.97□□□□□ -0.49
NEK1-203ENST00000507142 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
NEK1-203ENST00000507142 BCL11BQ9C0K0 894 aaPredicted RBP11.96□□□□□ -0.49
NEK1-203ENST00000507142 SLAIN2Q9P270 581 aa11.96□□□□□ -0.49
NEK1-203ENST00000507142 MAGI2Q86UL8 1455 aa11.96□□□□□ -0.49
NEK1-203ENST00000507142 MAPKBP1O60336 1514 aa11.96□□□□□ -0.49
NEK1-203ENST00000507142 APAF1O14727 1248 aa11.96□□□□□ -0.5
NEK1-203ENST00000507142 PRKAR2BP31323 418 aa11.95□□□□□ -0.5
NEK1-203ENST00000507142 KIF6Q6ZMV9 814 aa11.95□□□□□ -0.5
NEK1-203ENST00000507142 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
NEK1-203ENST00000507142 USHBP1Q8N6Y0 703 aa11.94□□□□□ -0.5
NEK1-203ENST00000507142 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
NEK1-203ENST00000507142 TCERG1O14776 1098 aaKnown RBP11.94□□□□□ -0.5
NEK1-203ENST00000507142 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
NEK1-203ENST00000507142 C9orf78Q9NZ63 289 aaPredicted RBP11.94□□□□□ -0.5
NEK1-203ENST00000507142 SUPT16HQ9Y5B9 1047 aaKnown RBP11.94□□□□□ -0.5
NEK1-203ENST00000507142 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
NEK1-203ENST00000507142 TMOD3Q9NYL9 352 aa11.93□□□□□ -0.5
NEK1-203ENST00000507142 CLUAP1Q96AJ1 413 aa11.93□□□□□ -0.5
NEK1-203ENST00000507142 FGD1P98174 961 aa11.93□□□□□ -0.5
NEK1-203ENST00000507142 LTKP29376 864 aa11.93□□□□□ -0.5
NEK1-203ENST00000507142 SHANK2Q9UPX8 1470 aa11.93□□□□□ -0.5
NEK1-203ENST00000507142 MPRIPQ6WCQ1 1025 aa11.92□□□□□ -0.5
NEK1-203ENST00000507142 TMEM2Q9UHN6 1383 aa11.92□□□□□ -0.5
NEK1-203ENST00000507142 PTPRKQ15262 1439 aa11.92□□□□□ -0.5
NEK1-203ENST00000507142 NAP1L2Q9ULW6 460 aaPredicted RBP11.92□□□□□ -0.5
NEK1-203ENST00000507142 MAGI3Q5TCQ9 1506 aa11.91□□□□□ -0.5
NEK1-203ENST00000507142 MYO5CQ9NQX4 1742 aa11.91□□□□□ -0.5
NEK1-203ENST00000507142 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
NEK1-203ENST00000507142 GNAI1P63096 354 aa11.91□□□□□ -0.5
NEK1-203ENST00000507142 FKBP5Q13451 457 aaPredicted RBP11.91□□□□□ -0.5
NEK1-203ENST00000507142 ZNF335Q9H4Z2 1342 aaPredicted RBP11.91□□□□□ -0.5
NEK1-203ENST00000507142 NSD3Q9BZ95 1437 aa11.91□□□□□ -0.5
NEK1-203ENST00000507142 VPS37DQ86XT2 251 aa11.9□□□□□ -0.5
NEK1-203ENST00000507142 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
NEK1-203ENST00000507142 BICDL1Q6ZP65 573 aa11.9□□□□□ -0.5
NEK1-203ENST00000507142 ANP32AP39687 249 aaKnown RBP11.9□□□□□ -0.5
NEK1-203ENST00000507142 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
NEK1-203ENST00000507142 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.51
NEK1-203ENST00000507142 HMMRO75330 724 aa11.89□□□□□ -0.51
NEK1-203ENST00000507142 NPHP4O75161 1426 aaPredicted RBP11.89□□□□□ -0.51
NEK1-203ENST00000507142 ANKRD24Q8TF21 1146 aa11.89□□□□□ -0.51
NEK1-203ENST00000507142 PTCD1O75127 700 aaKnown RBP11.89□□□□□ -0.51
NEK1-203ENST00000507142 DDX17Q92841 729 aaKnown RBP11.89□□□□□ -0.51
NEK1-203ENST00000507142 RGS3P49796 1198 aa11.89□□□□□ -0.51
NEK1-203ENST00000507142 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
NEK1-203ENST00000507142 DDB1Q16531 1140 aa11.88□□□□□ -0.51
NEK1-203ENST00000507142 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
NEK1-203ENST00000507142 BTG4Q9NY30 223 aa11.88□□□□□ -0.51
NEK1-203ENST00000507142 USP21Q9UK80 565 aa11.88□□□□□ -0.51
NEK1-203ENST00000507142 GPATCH3Q96I76 525 aa11.87□□□□□ -0.51
NEK1-203ENST00000507142 ACSBG1Q96GR2 724 aa11.87□□□□□ -0.51
NEK1-203ENST00000507142 RCAN3Q9UKA8 241 aa11.87□□□□□ -0.51
NEK1-203ENST00000507142 MLH3Q9UHC1 1453 aa11.87□□□□□ -0.51
NEK1-203ENST00000507142 TMEM94Q12767 1356 aa11.87□□□□□ -0.51
NEK1-203ENST00000507142 SCAF11Q99590 1463 aaKnown RBP11.87□□□□□ -0.51
NEK1-203ENST00000507142 NBPF14Q5TI25 921 aa11.86□□□□□ -0.51
NEK1-203ENST00000507142 ZPR1O75312 459 aa11.86□□□□□ -0.51
NEK1-203ENST00000507142 CFAP43Q8NDM7 1665 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms