RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
PHF3-208ENST00000506783 MYH16Q9H6N6 1097 aa12.11□□□□□ -0.47
PHF3-208ENST00000506783 CCDC141Q6ZP82 1450 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 PANK2Q9BZ23 570 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 CGNL1Q0VF96 1302 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 PLCH2O75038 1416 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 NSD3Q9BZ95 1437 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
PHF3-208ENST00000506783 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 C22orf23Q9BZE7 217 aa12.1□□□□□ -0.47
PHF3-208ENST00000506783 ABCC2Q92887 1545 aa12.09□□□□□ -0.47
PHF3-208ENST00000506783 SYCP2Q9BX26 1530 aa12.09□□□□□ -0.47
PHF3-208ENST00000506783 WDR7Q9Y4E6 1490 aa12.09□□□□□ -0.47
PHF3-208ENST00000506783 KRT24Q2M2I5 525 aa12.09□□□□□ -0.47
PHF3-208ENST00000506783 PMFBP1Q8TBY8 1022 aa12.09□□□□□ -0.47
PHF3-208ENST00000506783 SLC26A8Q96RN1 970 aa12.09□□□□□ -0.47
PHF3-208ENST00000506783 A2MP01023 1474 aa12.08□□□□□ -0.48
PHF3-208ENST00000506783 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
PHF3-208ENST00000506783 RALGAPBQ86X10 1494 aa12.08□□□□□ -0.48
PHF3-208ENST00000506783 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
PHF3-208ENST00000506783 IDI1Q13907 227 aa12.07□□□□□ -0.48
PHF3-208ENST00000506783 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
PHF3-208ENST00000506783 TRIM27P14373 513 aa12.07□□□□□ -0.48
PHF3-208ENST00000506783 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
PHF3-208ENST00000506783 BCL11BQ9C0K0 894 aaPredicted RBP12.07□□□□□ -0.48
PHF3-208ENST00000506783 MAGI2Q86UL8 1455 aa12.06□□□□□ -0.48
PHF3-208ENST00000506783 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
PHF3-208ENST00000506783 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
PHF3-208ENST00000506783 USP35Q9P2H5 1018 aa12.06□□□□□ -0.48
PHF3-208ENST00000506783 EMILIN1Q9Y6C2 1016 aa12.06□□□□□ -0.48
PHF3-208ENST00000506783 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.06□□□□□ -0.48
PHF3-208ENST00000506783 VGFO15240 615 aaPredicted RBP12.06□□□□□ -0.48
PHF3-208ENST00000506783 DIAPH1O60610 1272 aaKnown RBP12.06□□□□□ -0.48
PHF3-208ENST00000506783 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
PHF3-208ENST00000506783 DNMT1P26358 1616 aaKnown RBP12.05□□□□□ -0.48
PHF3-208ENST00000506783 SMARCA5O60264 1052 aaPredicted RBP12.05□□□□□ -0.48
PHF3-208ENST00000506783 CHAMP1Q96JM3 812 aa12.04□□□□□ -0.48
PHF3-208ENST00000506783 EID1Q9Y6B2 187 aa12.04□□□□□ -0.48
PHF3-208ENST00000506783 GOLGA6L3A6NEY3 463 aa12.04□□□□□ -0.48
PHF3-208ENST00000506783 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
PHF3-208ENST00000506783 EVC2Q86UK5 1308 aa12.04□□□□□ -0.48
PHF3-208ENST00000506783 TSPYL6Q8N831 410 aa12.04□□□□□ -0.48
PHF3-208ENST00000506783 KDM2BQ8NHM5 1336 aa12.04□□□□□ -0.48
PHF3-208ENST00000506783 CCDC9Q9Y3X0 531 aaKnown RBP12.03□□□□□ -0.48
PHF3-208ENST00000506783 TMPOP42166 694 aaKnown RBP12.03□□□□□ -0.48
PHF3-208ENST00000506783 HDGFP51858 240 aaKnown RBP12.03□□□□□ -0.48
PHF3-208ENST00000506783 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
PHF3-208ENST00000506783 C16orf71Q8IYS4 520 aaPredicted RBP12.02□□□□□ -0.48
PHF3-208ENST00000506783 PLA2R1Q13018 1463 aa12.02□□□□□ -0.48
PHF3-208ENST00000506783 MVPQ14764 893 aaKnown RBP12.02□□□□□ -0.49
PHF3-208ENST00000506783 NOS1P29475 1434 aa12.02□□□□□ -0.49
PHF3-208ENST00000506783 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
PHF3-208ENST00000506783 CDK19Q9BWU1 502 aa12.01□□□□□ -0.49
PHF3-208ENST00000506783 MCM10Q7L590 875 aa12.01□□□□□ -0.49
PHF3-208ENST00000506783 NME9Q86XW9 330 aa12.01□□□□□ -0.49
PHF3-208ENST00000506783 TERF2IPQ9NYB0 399 aa12.01□□□□□ -0.49
PHF3-208ENST00000506783 TRAK2O60296 914 aa12□□□□□ -0.49
PHF3-208ENST00000506783 PDE3AQ14432 1141 aa12□□□□□ -0.49
PHF3-208ENST00000506783 ATF7IPQ6VMQ6 1270 aa12□□□□□ -0.49
PHF3-208ENST00000506783 UGGT1Q9NYU2 1555 aa12□□□□□ -0.49
PHF3-208ENST00000506783 TRIM6-TRIM34B2RNG4 842 aa12□□□□□ -0.49
PHF3-208ENST00000506783 MAP4K4O95819 1239 aaPredicted RBP12□□□□□ -0.49
PHF3-208ENST00000506783 RILPL2Q969X0 211 aa12□□□□□ -0.49
PHF3-208ENST00000506783 KDM5CP41229 1560 aa11.99□□□□□ -0.49
PHF3-208ENST00000506783 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
PHF3-208ENST00000506783 GCC2Q8IWJ2 1684 aa11.99□□□□□ -0.49
PHF3-208ENST00000506783 F6X3S4 739 aa11.99□□□□□ -0.49
PHF3-208ENST00000506783 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
PHF3-208ENST00000506783 IPO8O15397 1037 aaKnown RBP11.99□□□□□ -0.49
PHF3-208ENST00000506783 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
PHF3-208ENST00000506783 ABCA8O94911 1581 aa11.98□□□□□ -0.49
PHF3-208ENST00000506783 RNF214Q8ND24 703 aa11.98□□□□□ -0.49
PHF3-208ENST00000506783 A0A0G2JS52 829 aa11.98□□□□□ -0.49
PHF3-208ENST00000506783 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
PHF3-208ENST00000506783 PNNQ9H307 717 aaKnown RBP11.98□□□□□ -0.49
PHF3-208ENST00000506783 DDX19BQ9UMR2 479 aa11.97□□□□□ -0.49
PHF3-208ENST00000506783 CHMP3Q9Y3E7 222 aa11.97□□□□□ -0.49
PHF3-208ENST00000506783 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
PHF3-208ENST00000506783 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.97□□□□□ -0.49
PHF3-208ENST00000506783 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
PHF3-208ENST00000506783 ANP32BQ92688 251 aaKnown RBP11.97□□□□□ -0.49
PHF3-208ENST00000506783 MBD5Q9P267 1494 aa11.97□□□□□ -0.49
PHF3-208ENST00000506783 FYB1O15117 783 aa11.96□□□□□ -0.49
PHF3-208ENST00000506783 MCTP1Q6DN14 999 aa11.96□□□□□ -0.49
PHF3-208ENST00000506783 AEBP1Q8IUX7 1158 aa11.96□□□□□ -0.49
PHF3-208ENST00000506783 OTUD7AQ8TE49 926 aaPredicted RBP11.96□□□□□ -0.49
PHF3-208ENST00000506783 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
PHF3-208ENST00000506783 MCM4P33991 863 aa11.95□□□□□ -0.5
PHF3-208ENST00000506783 NGEFQ8N5V2 710 aa11.95□□□□□ -0.5
PHF3-208ENST00000506783 UHRF1BP1Q6BDS2 1440 aa11.95□□□□□ -0.5
PHF3-208ENST00000506783 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
PHF3-208ENST00000506783 COL17A1Q9UMD9 1497 aaPredicted RBP11.94□□□□□ -0.5
PHF3-208ENST00000506783 HAP1P54257 671 aaPredicted RBP11.94□□□□□ -0.5
PHF3-208ENST00000506783 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
PHF3-208ENST00000506783 EXOC6BQ9Y2D4 811 aa11.94□□□□□ -0.5
PHF3-208ENST00000506783 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
PHF3-208ENST00000506783 TSPOAP1O95153 1857 aa11.93□□□□□ -0.5
PHF3-208ENST00000506783 C8orf58Q8NAV2 365 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms