RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 PLEKHH1Q9ULM0 1364 aa13.34□□□□□ -0.27
PDLIM5-209ENST00000506632 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
PDLIM5-209ENST00000506632 SIRT1Q96EB6 747 aa13.34□□□□□ -0.27
PDLIM5-209ENST00000506632 ADGRB1O14514 1584 aa13.33□□□□□ -0.28
PDLIM5-209ENST00000506632 WAPLQ7Z5K2 1190 aa13.33□□□□□ -0.28
PDLIM5-209ENST00000506632 STK26Q9P289 416 aa13.33□□□□□ -0.28
PDLIM5-209ENST00000506632 DDX17Q92841 729 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-209ENST00000506632 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
PDLIM5-209ENST00000506632 ORAI2Q96SN7 254 aa13.32□□□□□ -0.28
PDLIM5-209ENST00000506632 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
PDLIM5-209ENST00000506632 DLC1Q96QB1 1528 aa13.31□□□□□ -0.28
PDLIM5-209ENST00000506632 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
PDLIM5-209ENST00000506632 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
PDLIM5-209ENST00000506632 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
PDLIM5-209ENST00000506632 PNPLA6Q8IY17 1366 aa13.3□□□□□ -0.28
PDLIM5-209ENST00000506632 FMN2Q9NZ56 1722 aa13.3□□□□□ -0.28
PDLIM5-209ENST00000506632 DCAF11Q8TEB1 546 aa13.29□□□□□ -0.28
PDLIM5-209ENST00000506632 PPP4R3CPQ6ZMV5 832 aa13.27□□□□□ -0.29
PDLIM5-209ENST00000506632 PXDNQ92626 1479 aa13.27□□□□□ -0.29
PDLIM5-209ENST00000506632 ADGRB2O60241 1585 aa13.26□□□□□ -0.29
PDLIM5-209ENST00000506632 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
PDLIM5-209ENST00000506632 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
PDLIM5-209ENST00000506632 NPHP3Q7Z494 1330 aa13.25□□□□□ -0.29
PDLIM5-209ENST00000506632 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
PDLIM5-209ENST00000506632 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
PDLIM5-209ENST00000506632 KIF1AQ12756 1690 aa13.24□□□□□ -0.29
PDLIM5-209ENST00000506632 MEX3CQ5U5Q3 659 aaKnown RBP13.24□□□□□ -0.29
PDLIM5-209ENST00000506632 NUTM2FA1L443 756 aa13.23□□□□□ -0.29
PDLIM5-209ENST00000506632 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-209ENST00000506632 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-209ENST00000506632 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
PDLIM5-209ENST00000506632 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 USP32Q8NFA0 1604 aa13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 FOXO3O43524 673 aa13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 ZNF772Q68DY9 489 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 ANKARQ7Z5J8 1434 aa13.22□□□□□ -0.29
PDLIM5-209ENST00000506632 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDLIM5-209ENST00000506632 POGKQ9P215 609 aa13.21□□□□□ -0.29
PDLIM5-209ENST00000506632 AFF2P51816 1311 aa13.19□□□□□ -0.3
PDLIM5-209ENST00000506632 XPCQ01831 940 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-209ENST00000506632 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
PDLIM5-209ENST00000506632 TULP4Q9NRJ4 1543 aa13.18□□□□□ -0.3
PDLIM5-209ENST00000506632 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
PDLIM5-209ENST00000506632 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-209ENST00000506632 C8orf37Q96NL8 207 aa13.17□□□□□ -0.3
PDLIM5-209ENST00000506632 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 PRR36Q9H6K5 1346 aa13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 WASLO00401 505 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 KRT28Q7Z3Y7 464 aa13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 HIRIP3Q9BW71 556 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-209ENST00000506632 TNS3Q68CZ2 1445 aa13.15□□□□□ -0.3
PDLIM5-209ENST00000506632 ADAMTS2O95450 1211 aa13.15□□□□□ -0.3
PDLIM5-209ENST00000506632 NBPF1Q3BBV0 1214 aa13.15□□□□□ -0.3
PDLIM5-209ENST00000506632 L3MBTL2Q969R5 705 aa13.15□□□□□ -0.3
PDLIM5-209ENST00000506632 MARF1Q9Y4F3 1742 aaKnown RBP13.15□□□□□ -0.3
PDLIM5-209ENST00000506632 SBNO1A3KN83 1393 aa13.15□□□□□ -0.3
PDLIM5-209ENST00000506632 RXRBP28702 533 aa13.14□□□□□ -0.31
PDLIM5-209ENST00000506632 FNBP4Q8N3X1 1017 aaPredicted RBP13.14□□□□□ -0.31
PDLIM5-209ENST00000506632 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
PDLIM5-209ENST00000506632 SIN3AQ96ST3 1273 aa13.14□□□□□ -0.31
PDLIM5-209ENST00000506632 ATP7BP35670 1465 aa13.14□□□□□ -0.31
PDLIM5-209ENST00000506632 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
PDLIM5-209ENST00000506632 PSME1Q06323 249 aa13.12□□□□□ -0.31
PDLIM5-209ENST00000506632 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
PDLIM5-209ENST00000506632 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
PDLIM5-209ENST00000506632 BCL9LQ86UU0 1499 aa13.11□□□□□ -0.31
PDLIM5-209ENST00000506632 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
PDLIM5-209ENST00000506632 ATRNO75882 1429 aa13.11□□□□□ -0.31
PDLIM5-209ENST00000506632 TOPAZ1Q8N9V7 1692 aa13.11□□□□□ -0.31
PDLIM5-209ENST00000506632 ALS2Q96Q42 1657 aa13.11□□□□□ -0.31
PDLIM5-209ENST00000506632 ITSN1Q15811 1721 aa13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 RBM6P78332 1123 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 USP21Q9UK80 565 aa13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 RGS12O14924 1447 aa13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
PDLIM5-209ENST00000506632 SLIT2O94813 1529 aa13.09□□□□□ -0.31
PDLIM5-209ENST00000506632 GPRASP1Q5JY77 1395 aa13.08□□□□□ -0.31
PDLIM5-209ENST00000506632 TRIM26Q12899 539 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-209ENST00000506632 NEUROD1Q13562 356 aa13.08□□□□□ -0.32
PDLIM5-209ENST00000506632 NUDT16Q96DE0 195 aaKnown RBP13.08□□□□□ -0.32
PDLIM5-209ENST00000506632 CDK19Q9BWU1 502 aa13.08□□□□□ -0.32
PDLIM5-209ENST00000506632 TRPC5Q9UL62 973 aaPredicted RBP13.08□□□□□ -0.32
PDLIM5-209ENST00000506632 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-209ENST00000506632 POLR3AO14802 1390 aaPredicted RBP13.07□□□□□ -0.32
PDLIM5-209ENST00000506632 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
PDLIM5-209ENST00000506632 CRYBG1Q9Y4K1 1723 aa13.06□□□□□ -0.32
PDLIM5-209ENST00000506632 CABLES1Q8TDN4 633 aa13.06□□□□□ -0.32
PDLIM5-209ENST00000506632 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
PDLIM5-209ENST00000506632 NGDNQ8NEJ9 315 aaKnown RBP13.05□□□□□ -0.32
PDLIM5-209ENST00000506632 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
PDLIM5-209ENST00000506632 NBPF8Q3BBV2 869 aa13.04□□□□□ -0.32
PDLIM5-209ENST00000506632 LMOD2Q6P5Q4 547 aa13.04□□□□□ -0.32
PDLIM5-209ENST00000506632 UPF1Q92900 1129 aaKnown RBP eCLIP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms