RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 TRPM2O94759 1503 aa14.21□□□□□ -0.14
PTPN20-216ENST00000506080 AFF2P51816 1311 aa14.2□□□□□ -0.14
PTPN20-216ENST00000506080 HAX1O00165 279 aa14.19□□□□□ -0.14
PTPN20-216ENST00000506080 ASXL1Q8IXJ9 1541 aa14.18□□□□□ -0.14
PTPN20-216ENST00000506080 DDX17Q92841 729 aaKnown RBP14.17□□□□□ -0.14
PTPN20-216ENST00000506080 C8orf37Q96NL8 207 aa14.16□□□□□ -0.14
PTPN20-216ENST00000506080 NUP155O75694 1391 aa14.16□□□□□ -0.14
PTPN20-216ENST00000506080 DCCP43146 1447 aa14.16□□□□□ -0.14
PTPN20-216ENST00000506080 MST1RQ04912 1400 aa14.16□□□□□ -0.14
PTPN20-216ENST00000506080 CDK12Q9NYV4 1490 aaPredicted RBP14.16□□□□□ -0.14
PTPN20-216ENST00000506080 IQGAP3Q86VI3 1631 aa14.16□□□□□ -0.14
PTPN20-216ENST00000506080 SETD5Q9C0A6 1442 aa14.15□□□□□ -0.14
PTPN20-216ENST00000506080 ZNF326Q5BKZ1 582 aaKnown RBP14.15□□□□□ -0.14
PTPN20-216ENST00000506080 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
PTPN20-216ENST00000506080 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
PTPN20-216ENST00000506080 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
PTPN20-216ENST00000506080 XRN1Q8IZH2 1706 aaKnown RBP14.14□□□□□ -0.15
PTPN20-216ENST00000506080 NRXN3Q9Y4C0 1643 aa14.14□□□□□ -0.15
PTPN20-216ENST00000506080 METP08581 1390 aa14.14□□□□□ -0.15
PTPN20-216ENST00000506080 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
PTPN20-216ENST00000506080 ITGAEP38570 1179 aa14.13□□□□□ -0.15
PTPN20-216ENST00000506080 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
PTPN20-216ENST00000506080 RGS12O14924 1447 aa14.12□□□□□ -0.15
PTPN20-216ENST00000506080 ROCK1Q13464 1354 aa14.12□□□□□ -0.15
PTPN20-216ENST00000506080 PNPLA6Q8IY17 1366 aa14.12□□□□□ -0.15
PTPN20-216ENST00000506080 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
PTPN20-216ENST00000506080 SETBP1Q9Y6X0 1596 aa14.12□□□□□ -0.15
PTPN20-216ENST00000506080 SPDYE4A6NLX3 237 aa14.11□□□□□ -0.15
PTPN20-216ENST00000506080 RBM6P78332 1123 aaKnown RBP14.11□□□□□ -0.15
PTPN20-216ENST00000506080 ADAMTS2O95450 1211 aa14.1□□□□□ -0.15
PTPN20-216ENST00000506080 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
PTPN20-216ENST00000506080 EVX2Q03828 476 aa14.09□□□□□ -0.15
PTPN20-216ENST00000506080 NGLY1Q96IV0 654 aa14.09□□□□□ -0.15
PTPN20-216ENST00000506080 NALCNQ8IZF0 1738 aa14.07□□□□□ -0.16
PTPN20-216ENST00000506080 C1orf167Q5SNV9 1468 aa14.07□□□□□ -0.16
PTPN20-216ENST00000506080 SPHKAPQ2M3C7 1700 aa14.07□□□□□ -0.16
PTPN20-216ENST00000506080 ORAI2Q96SN7 254 aa14.05□□□□□ -0.16
PTPN20-216ENST00000506080 USP21Q9UK80 565 aa14.05□□□□□ -0.16
PTPN20-216ENST00000506080 NEXMIFQ5QGS0 1516 aa14.04□□□□□ -0.16
PTPN20-216ENST00000506080 CLTCL1P53675 1640 aa14.03□□□□□ -0.16
PTPN20-216ENST00000506080 ATAD2Q6PL18 1390 aa14.03□□□□□ -0.16
PTPN20-216ENST00000506080 PPARGC1BQ86YN6 1023 aaKnown RBP14.02□□□□□ -0.16
PTPN20-216ENST00000506080 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.16
PTPN20-216ENST00000506080 SOS2Q07890 1332 aaPredicted RBP14.02□□□□□ -0.17
PTPN20-216ENST00000506080 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
PTPN20-216ENST00000506080 PTCH1Q13635 1447 aa13.99□□□□□ -0.17
PTPN20-216ENST00000506080 FNBP4Q8N3X1 1017 aaPredicted RBP13.98□□□□□ -0.17
PTPN20-216ENST00000506080 LAMC1P11047 1609 aa13.98□□□□□ -0.17
PTPN20-216ENST00000506080 KIF1BO60333 1816 aa13.98□□□□□ -0.17
PTPN20-216ENST00000506080 ATRNO75882 1429 aa13.97□□□□□ -0.17
PTPN20-216ENST00000506080 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
PTPN20-216ENST00000506080 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
PTPN20-216ENST00000506080 SRCAPQ6ZRS2 3230 aa13.95□□□□□ -0.18
PTPN20-216ENST00000506080 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
PTPN20-216ENST00000506080 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-216ENST00000506080 ESCO1Q5FWF5 840 aa13.95□□□□□ -0.18
PTPN20-216ENST00000506080 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-216ENST00000506080 NPHP3Q7Z494 1330 aa13.94□□□□□ -0.18
PTPN20-216ENST00000506080 HFM1A2PYH4 1435 aa13.94□□□□□ -0.18
PTPN20-216ENST00000506080 MYOM2P54296 1465 aa13.94□□□□□ -0.18
PTPN20-216ENST00000506080 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
PTPN20-216ENST00000506080 NUTM2FA1L443 756 aa13.92□□□□□ -0.18
PTPN20-216ENST00000506080 FOXO3O43524 673 aa13.92□□□□□ -0.18
PTPN20-216ENST00000506080 PXDNQ92626 1479 aa13.91□□□□□ -0.18
PTPN20-216ENST00000506080 PRAG1Q86YV5 1406 aa13.91□□□□□ -0.18
PTPN20-216ENST00000506080 RPGRIP1LQ68CZ1 1315 aa13.91□□□□□ -0.18
PTPN20-216ENST00000506080 GJD4Q96KN9 370 aaPredicted RBP13.91□□□□□ -0.18
PTPN20-216ENST00000506080 CCDC125Q86Z20 511 aa13.9□□□□□ -0.18
PTPN20-216ENST00000506080 NAIPQ13075 1403 aa13.9□□□□□ -0.18
PTPN20-216ENST00000506080 CDC42BPGQ6DT37 1551 aa13.89□□□□□ -0.19
PTPN20-216ENST00000506080 STK26Q9P289 416 aa13.89□□□□□ -0.19
PTPN20-216ENST00000506080 MARF1Q9Y4F3 1742 aaKnown RBP13.88□□□□□ -0.19
PTPN20-216ENST00000506080 EP400Q96L91 3159 aa13.88□□□□□ -0.19
PTPN20-216ENST00000506080 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
PTPN20-216ENST00000506080 FARP1Q9Y4F1 1045 aaPredicted RBP13.88□□□□□ -0.19
PTPN20-216ENST00000506080 PPLO60437 1756 aa13.88□□□□□ -0.19
PTPN20-216ENST00000506080 LRPPRCP42704 1394 aaKnown RBP13.86□□□□□ -0.19
PTPN20-216ENST00000506080 ADGRF5Q8IZF2 1346 aa13.86□□□□□ -0.19
PTPN20-216ENST00000506080 RALGAPBQ86X10 1494 aa13.86□□□□□ -0.19
PTPN20-216ENST00000506080 UNC5CLQ8IV45 518 aa13.86□□□□□ -0.19
PTPN20-216ENST00000506080 DEFB132Q7Z7B7 95 aa13.85□□□□□ -0.19
PTPN20-216ENST00000506080 GLI3P10071 1580 aa13.85□□□□□ -0.19
PTPN20-216ENST00000506080 PLEKHH1Q9ULM0 1364 aa13.85□□□□□ -0.19
PTPN20-216ENST00000506080 PLEKHG5O94827 1062 aa13.84□□□□□ -0.19
PTPN20-216ENST00000506080 BLMP54132 1417 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-216ENST00000506080 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
PTPN20-216ENST00000506080 CREBZFQ9NS37 354 aa13.84□□□□□ -0.19
PTPN20-216ENST00000506080 SLIT2O94813 1529 aa13.84□□□□□ -0.19
PTPN20-216ENST00000506080 SPATA31A3Q5VYP0 1347 aa13.84□□□□□ -0.19
PTPN20-216ENST00000506080 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
PTPN20-216ENST00000506080 RRBP1Q9P2E9 1410 aaKnown RBP13.83□□□□□ -0.19
PTPN20-216ENST00000506080 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
PTPN20-216ENST00000506080 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
PTPN20-216ENST00000506080 KRT28Q7Z3Y7 464 aa13.82□□□□□ -0.2
PTPN20-216ENST00000506080 TECPR2O15040 1411 aa13.82□□□□□ -0.2
PTPN20-216ENST00000506080 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
PTPN20-216ENST00000506080 SEPT12Q8IYM1 358 aa13.81□□□□□ -0.2
PTPN20-216ENST00000506080 CABLES1Q8TDN4 633 aa13.81□□□□□ -0.2
PTPN20-216ENST00000506080 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
PTPN20-216ENST00000506080 BRWD3Q6RI45 1802 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms