RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 TECPR2O15040 1411 aa15.28■□□□□ 0.04
NR1I3-222ENST00000506018 STK26Q9P289 416 aa15.28■□□□□ 0.04
NR1I3-222ENST00000506018 RGS17Q9UGC6 210 aaPredicted RBP15.28■□□□□ 0.04
NR1I3-222ENST00000506018 ABCC11Q96J66 1382 aa15.27■□□□□ 0.04
NR1I3-222ENST00000506018 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
NR1I3-222ENST00000506018 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
NR1I3-222ENST00000506018 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
NR1I3-222ENST00000506018 NRXN1Q9ULB1 1477 aa15.25■□□□□ 0.03
NR1I3-222ENST00000506018 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
NR1I3-222ENST00000506018 C14orf93Q9H972 538 aaKnown RBP15.24■□□□□ 0.03
NR1I3-222ENST00000506018 LRP6O75581 1613 aa15.24■□□□□ 0.03
NR1I3-222ENST00000506018 NUTM2BA6NNL0 878 aaPredicted RBP15.24■□□□□ 0.03
NR1I3-222ENST00000506018 NUTM2EB1AL46 878 aaPredicted RBP15.24■□□□□ 0.03
NR1I3-222ENST00000506018 NUTM2AQ8IVF1 878 aaPredicted RBP15.24■□□□□ 0.03
NR1I3-222ENST00000506018 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
NR1I3-222ENST00000506018 ESCO1Q5FWF5 840 aa15.23■□□□□ 0.03
NR1I3-222ENST00000506018 POTEAQ6S8J7 498 aa15.23■□□□□ 0.03
NR1I3-222ENST00000506018 WAPLQ7Z5K2 1190 aa15.23■□□□□ 0.03
NR1I3-222ENST00000506018 SIRT1Q96EB6 747 aa15.23■□□□□ 0.03
NR1I3-222ENST00000506018 ORAI2Q96SN7 254 aa15.22■□□□□ 0.03
NR1I3-222ENST00000506018 NPHP3Q7Z494 1330 aa15.21■□□□□ 0.03
NR1I3-222ENST00000506018 CFAP70Q5T0N1 1121 aa15.21■□□□□ 0.02
NR1I3-222ENST00000506018 DDX17Q92841 729 aaKnown RBP15.21■□□□□ 0.02
NR1I3-222ENST00000506018 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
NR1I3-222ENST00000506018 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
NR1I3-222ENST00000506018 NPM3O75607 178 aaKnown RBP15.2■□□□□ 0.02
NR1I3-222ENST00000506018 SOS2Q07890 1332 aaPredicted RBP15.2■□□□□ 0.02
NR1I3-222ENST00000506018 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
NR1I3-222ENST00000506018 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
NR1I3-222ENST00000506018 POGKQ9P215 609 aa15.18■□□□□ 0.02
NR1I3-222ENST00000506018 KDM2AQ9Y2K7 1162 aa15.18■□□□□ 0.02
NR1I3-222ENST00000506018 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
NR1I3-222ENST00000506018 DLC1Q96QB1 1528 aa15.17■□□□□ 0.02
NR1I3-222ENST00000506018 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
NR1I3-222ENST00000506018 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
NR1I3-222ENST00000506018 PRAM1Q96QH2 718 aa15.15■□□□□ 0.02
NR1I3-222ENST00000506018 AFF2P51816 1311 aa15.15■□□□□ 0.02
NR1I3-222ENST00000506018 COL22A1Q8NFW1 1626 aaPredicted RBP15.15■□□□□ 0.02
NR1I3-222ENST00000506018 RGPD8O14715 1765 aaPredicted RBP15.15■□□□□ 0.02
NR1I3-222ENST00000506018 FOXO3O43524 673 aa15.14■□□□□ 0.01
NR1I3-222ENST00000506018 RXRBP28702 533 aa15.14■□□□□ 0.01
NR1I3-222ENST00000506018 NGLY1Q96IV0 654 aa15.13■□□□□ 0.01
NR1I3-222ENST00000506018 ADGRB1O14514 1584 aa15.13■□□□□ 0.01
NR1I3-222ENST00000506018 PXDNQ92626 1479 aa15.13■□□□□ 0.01
NR1I3-222ENST00000506018 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
NR1I3-222ENST00000506018 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
NR1I3-222ENST00000506018 SAFB2Q14151 953 aaKnown RBP eCLIP15.12■□□□□ 0.01
NR1I3-222ENST00000506018 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
NR1I3-222ENST00000506018 TRAK1Q9UPV9 953 aa15.11■□□□□ 0.01
NR1I3-222ENST00000506018 MARF1Q9Y4F3 1742 aaKnown RBP15.11■□□□□ 0.01
NR1I3-222ENST00000506018 ADGRB2O60241 1585 aa15.11■□□□□ 0.01
NR1I3-222ENST00000506018 PSME1Q06323 249 aa15.11■□□□□ 0.01
NR1I3-222ENST00000506018 ANKARQ7Z5J8 1434 aa15.1■□□□□ 0.01
NR1I3-222ENST00000506018 KIAA1210Q9ULL0 1709 aa15.1■□□□□ 0.01
NR1I3-222ENST00000506018 XPCQ01831 940 aaPredicted RBP15.1■□□□□ 0.01
NR1I3-222ENST00000506018 PHF8Q9UPP1 1060 aa15.1■□□□□ 0.01
NR1I3-222ENST00000506018 CDK12Q9NYV4 1490 aaPredicted RBP15.09■□□□□ 0.01
NR1I3-222ENST00000506018 QTRT2Q9H974 415 aaKnown RBP15.09■□□□□ 0.01
NR1I3-222ENST00000506018 ARHGEF28Q8N1W1 1705 aaKnown RBP15.08■□□□□ 0
NR1I3-222ENST00000506018 RBM6P78332 1123 aaKnown RBP15.08■□□□□ 0
NR1I3-222ENST00000506018 KRT28Q7Z3Y7 464 aa15.08■□□□□ 0
NR1I3-222ENST00000506018 USP21Q9UK80 565 aa15.07■□□□□ 0
NR1I3-222ENST00000506018 SPATA31A3Q5VYP0 1347 aa15.06■□□□□ 0
NR1I3-222ENST00000506018 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
NR1I3-222ENST00000506018 HAP1P54257 671 aaPredicted RBP15.06■□□□□ 0
NR1I3-222ENST00000506018 TRPC5Q9UL62 973 aaPredicted RBP15.06■□□□□ 0
NR1I3-222ENST00000506018 ITSN1Q15811 1721 aa15.06■□□□□ 0
NR1I3-222ENST00000506018 HIRIP3Q9BW71 556 aaPredicted RBP15.05■□□□□ -0
NR1I3-222ENST00000506018 USP32Q8NFA0 1604 aa15.05■□□□□ -0
NR1I3-222ENST00000506018 TNS3Q68CZ2 1445 aa15.04■□□□□ -0
NR1I3-222ENST00000506018 WASLO00401 505 aaPredicted RBP15.04■□□□□ -0
NR1I3-222ENST00000506018 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
NR1I3-222ENST00000506018 FNBP4Q8N3X1 1017 aaPredicted RBP15.04■□□□□ -0
NR1I3-222ENST00000506018 TULP4Q9NRJ4 1543 aa15.04■□□□□ -0
NR1I3-222ENST00000506018 ARHGEF10O15013 1369 aa15.04■□□□□ -0
NR1I3-222ENST00000506018 SBNO1A3KN83 1393 aa15.03■□□□□ -0
NR1I3-222ENST00000506018 GPRASP1Q5JY77 1395 aa15.03■□□□□ -0
NR1I3-222ENST00000506018 LMOD2Q6P5Q4 547 aa15.02■□□□□ -0
NR1I3-222ENST00000506018 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
NR1I3-222ENST00000506018 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.01□□□□□ -0.01
NR1I3-222ENST00000506018 POTEDQ86YR6 584 aa14.99□□□□□ -0.01
NR1I3-222ENST00000506018 NGDNQ8NEJ9 315 aaKnown RBP14.99□□□□□ -0.01
NR1I3-222ENST00000506018 RGS12O14924 1447 aa14.99□□□□□ -0.01
NR1I3-222ENST00000506018 ATRNO75882 1429 aa14.98□□□□□ -0.01
NR1I3-222ENST00000506018 ABCA3Q99758 1704 aa14.98□□□□□ -0.01
NR1I3-222ENST00000506018 TRPM3Q9HCF6 1732 aaPredicted RBP14.98□□□□□ -0.01
NR1I3-222ENST00000506018 NWD2Q9ULI1 1742 aa14.97□□□□□ -0.01
NR1I3-222ENST00000506018 UPF1Q92900 1129 aaKnown RBP eCLIP14.97□□□□□ -0.01
NR1I3-222ENST00000506018 PRR36Q9H6K5 1346 aa14.96□□□□□ -0.01
NR1I3-222ENST00000506018 UNC5CLQ8IV45 518 aa14.96□□□□□ -0.02
NR1I3-222ENST00000506018 NUDT16Q96DE0 195 aaKnown RBP14.96□□□□□ -0.02
NR1I3-222ENST00000506018 BCL9LQ86UU0 1499 aa14.96□□□□□ -0.02
NR1I3-222ENST00000506018 ALS2Q96Q42 1657 aa14.96□□□□□ -0.02
NR1I3-222ENST00000506018 ATAD2Q6PL18 1390 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 PLCH1Q4KWH8 1693 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 ATP7BP35670 1465 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 PAK3O75914 559 aaPredicted RBP14.95□□□□□ -0.02
NR1I3-222ENST00000506018 PLEKHG5O94827 1062 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
NR1I3-222ENST00000506018 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms