RNA–Protein interactions for RNA: ENST00000504789.5

SUB1-205, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 4

Gene SUB1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-205ENST00000504789 LAMC1P11047 1609 aa28.68■■■□□ 2.18
SUB1-205ENST00000504789 CDC42BPGQ6DT37 1551 aa28.67■■■□□ 2.18
SUB1-205ENST00000504789 ORAI2Q96SN7 254 aa28.67■■■□□ 2.18
SUB1-205ENST00000504789 LRP6O75581 1613 aa28.67■■■□□ 2.18
SUB1-205ENST00000504789 SIRT1Q96EB6 747 aa28.66■■■□□ 2.18
SUB1-205ENST00000504789 DHX57Q6P158 1386 aaKnown RBP28.65■■■□□ 2.18
SUB1-205ENST00000504789 PLEKHH1Q9ULM0 1364 aa28.65■■■□□ 2.18
SUB1-205ENST00000504789 POTEAQ6S8J7 498 aa28.64■■■□□ 2.18
SUB1-205ENST00000504789 MEX3CQ5U5Q3 659 aaKnown RBP28.61■■■□□ 2.17
SUB1-205ENST00000504789 DCAF11Q8TEB1 546 aa28.61■■■□□ 2.17
SUB1-205ENST00000504789 STAC3Q96MF2 364 aa28.61■■■□□ 2.17
SUB1-205ENST00000504789 SOS2Q07890 1332 aaPredicted RBP28.6■■■□□ 2.17
SUB1-205ENST00000504789 KDM2AQ9Y2K7 1162 aa28.59■■■□□ 2.17
SUB1-205ENST00000504789 NUTM2BA6NNL0 878 aaPredicted RBP28.58■■■□□ 2.17
SUB1-205ENST00000504789 NUTM2EB1AL46 878 aaPredicted RBP28.58■■■□□ 2.17
SUB1-205ENST00000504789 ESCO1Q5FWF5 840 aa28.58■■■□□ 2.17
SUB1-205ENST00000504789 NUTM2AQ8IVF1 878 aaPredicted RBP28.58■■■□□ 2.17
SUB1-205ENST00000504789 PNPLA6Q8IY17 1366 aa28.58■■■□□ 2.17
SUB1-205ENST00000504789 ADGRB1O14514 1584 aa28.54■■■□□ 2.16
SUB1-205ENST00000504789 NUTM2FA1L443 756 aa28.54■■■□□ 2.16
SUB1-205ENST00000504789 NPHP3Q7Z494 1330 aa28.53■■■□□ 2.16
SUB1-205ENST00000504789 PRAM1Q96QH2 718 aa28.53■■■□□ 2.16
SUB1-205ENST00000504789 DLC1Q96QB1 1528 aa28.53■■■□□ 2.16
SUB1-205ENST00000504789 ZNF772Q68DY9 489 aaPredicted RBP28.52■■■□□ 2.16
SUB1-205ENST00000504789 FMN2Q9NZ56 1722 aa28.52■■■□□ 2.16
SUB1-205ENST00000504789 FOXO3O43524 673 aa28.49■■■□□ 2.15
SUB1-205ENST00000504789 POGKQ9P215 609 aa28.49■■■□□ 2.15
SUB1-205ENST00000504789 SAFB2Q14151 953 aaKnown RBP eCLIP28.48■■■□□ 2.15
SUB1-205ENST00000504789 TRAK1Q9UPV9 953 aa28.47■■■□□ 2.15
SUB1-205ENST00000504789 PXDNQ92626 1479 aa28.46■■■□□ 2.15
SUB1-205ENST00000504789 AFF2P51816 1311 aa28.43■■■□□ 2.14
SUB1-205ENST00000504789 XPCQ01831 940 aaPredicted RBP28.42■■■□□ 2.14
SUB1-205ENST00000504789 C8orf37Q96NL8 207 aa28.42■■■□□ 2.14
SUB1-205ENST00000504789 KIF1AQ12756 1690 aa28.42■■■□□ 2.14
SUB1-205ENST00000504789 COL22A1Q8NFW1 1626 aaPredicted RBP28.4■■■□□ 2.14
SUB1-205ENST00000504789 ADAMTS2O95450 1211 aa28.4■■■□□ 2.14
SUB1-205ENST00000504789 ADGRB2O60241 1585 aa28.4■■■□□ 2.14
SUB1-205ENST00000504789 PHF8Q9UPP1 1060 aa28.39■■■□□ 2.14
SUB1-205ENST00000504789 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
SUB1-205ENST00000504789 ANKARQ7Z5J8 1434 aa28.36■■■□□ 2.13
SUB1-205ENST00000504789 KRT28Q7Z3Y7 464 aa28.35■■■□□ 2.13
SUB1-205ENST00000504789 NGLY1Q96IV0 654 aa28.35■■■□□ 2.13
SUB1-205ENST00000504789 HIRIP3Q9BW71 556 aaPredicted RBP28.35■■■□□ 2.13
SUB1-205ENST00000504789 MINK1Q8N4C8 1332 aaPredicted RBP28.35■■■□□ 2.13
SUB1-205ENST00000504789 RXRBP28702 533 aa28.34■■■□□ 2.13
SUB1-205ENST00000504789 SPATA31A3Q5VYP0 1347 aa28.33■■■□□ 2.13
SUB1-205ENST00000504789 KIAA1210Q9ULL0 1709 aa28.32■■■□□ 2.12
SUB1-205ENST00000504789 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
SUB1-205ENST00000504789 EIF3AQ14152 1382 aaKnown RBP28.31■■■□□ 2.12
SUB1-205ENST00000504789 ARHGEF28Q8N1W1 1705 aaKnown RBP28.3■■■□□ 2.12
SUB1-205ENST00000504789 WASLO00401 505 aaPredicted RBP28.3■■■□□ 2.12
SUB1-205ENST00000504789 PSME1Q06323 249 aa28.3■■■□□ 2.12
SUB1-205ENST00000504789 QTRT2Q9H974 415 aaKnown RBP28.29■■■□□ 2.12
SUB1-205ENST00000504789 FNBP4Q8N3X1 1017 aaPredicted RBP28.28■■■□□ 2.12
SUB1-205ENST00000504789 PMFBP1Q8TBY8 1022 aa28.27■■■□□ 2.12
SUB1-205ENST00000504789 TULP4Q9NRJ4 1543 aa28.27■■■□□ 2.12
SUB1-205ENST00000504789 CDK12Q9NYV4 1490 aaPredicted RBP28.27■■■□□ 2.12
SUB1-205ENST00000504789 NBPF1Q3BBV0 1214 aa28.26■■■□□ 2.11
SUB1-205ENST00000504789 SIN3AQ96ST3 1273 aa28.26■■■□□ 2.11
SUB1-205ENST00000504789 USP21Q9UK80 565 aa28.26■■■□□ 2.11
SUB1-205ENST00000504789 SBNO1A3KN83 1393 aa28.25■■■□□ 2.11
SUB1-205ENST00000504789 PRR36Q9H6K5 1346 aa28.25■■■□□ 2.11
SUB1-205ENST00000504789 RBM6P78332 1123 aaKnown RBP28.25■■■□□ 2.11
SUB1-205ENST00000504789 L3MBTL2Q969R5 705 aa28.25■■■□□ 2.11
SUB1-205ENST00000504789 TNS3Q68CZ2 1445 aa28.25■■■□□ 2.11
SUB1-205ENST00000504789 MARF1Q9Y4F3 1742 aaKnown RBP28.21■■■□□ 2.11
SUB1-205ENST00000504789 TRPC5Q9UL62 973 aaPredicted RBP28.2■■■□□ 2.1
SUB1-205ENST00000504789 NEUROD1Q13562 356 aa28.19■■■□□ 2.1
SUB1-205ENST00000504789 ARHGEF10O15013 1369 aa28.19■■■□□ 2.1
SUB1-205ENST00000504789 GPRASP1Q5JY77 1395 aa28.17■■■□□ 2.1
SUB1-205ENST00000504789 LMOD2Q6P5Q4 547 aa28.17■■■□□ 2.1
SUB1-205ENST00000504789 ATP7BP35670 1465 aa28.16■■■□□ 2.1
SUB1-205ENST00000504789 BCL9LQ86UU0 1499 aa28.16■■■□□ 2.1
SUB1-205ENST00000504789 NUDT16Q96DE0 195 aaKnown RBP28.16■■■□□ 2.1
SUB1-205ENST00000504789 CDK19Q9BWU1 502 aa28.16■■■□□ 2.1
SUB1-205ENST00000504789 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
SUB1-205ENST00000504789 RGS12O14924 1447 aa28.15■■■□□ 2.1
SUB1-205ENST00000504789 ATRNO75882 1429 aa28.15■■■□□ 2.1
SUB1-205ENST00000504789 HAP1P54257 671 aaPredicted RBP28.14■■■□□ 2.1
SUB1-205ENST00000504789 CABLES1Q8TDN4 633 aa28.14■■■□□ 2.1
SUB1-205ENST00000504789 TRPM3Q9HCF6 1732 aaPredicted RBP28.13■■■□□ 2.09
SUB1-205ENST00000504789 ITSN1Q15811 1721 aa28.12■■■□□ 2.09
SUB1-205ENST00000504789 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
SUB1-205ENST00000504789 CENPJQ9HC77 1338 aaPredicted RBP28.11■■■□□ 2.09
SUB1-205ENST00000504789 SLIT2O94813 1529 aa28.1■■■□□ 2.09
SUB1-205ENST00000504789 PLEKHG5O94827 1062 aa28.09■■■□□ 2.09
SUB1-205ENST00000504789 UPF1Q92900 1129 aaKnown RBP eCLIP28.09■■■□□ 2.09
SUB1-205ENST00000504789 CCDC61Q9Y6R9 512 aa28.09■■■□□ 2.09
SUB1-205ENST00000504789 TRPM1Q7Z4N2 1603 aa28.08■■■□□ 2.09
SUB1-205ENST00000504789 ALS2Q96Q42 1657 aa28.08■■■□□ 2.09
SUB1-205ENST00000504789 UNC5CLQ8IV45 518 aa28.08■■■□□ 2.09
SUB1-205ENST00000504789 ABCA3Q99758 1704 aa28.07■■■□□ 2.08
SUB1-205ENST00000504789 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.06■■■□□ 2.08
SUB1-205ENST00000504789 GJD4Q96KN9 370 aaPredicted RBP28.05■■■□□ 2.08
SUB1-205ENST00000504789 TOPAZ1Q8N9V7 1692 aa28.04■■■□□ 2.08
SUB1-205ENST00000504789 PAK3O75914 559 aaPredicted RBP28.04■■■□□ 2.08
SUB1-205ENST00000504789 POLR3AO14802 1390 aaPredicted RBP28.03■■■□□ 2.08
SUB1-205ENST00000504789 PLEKHG3A1L390 1219 aa28.03■■■□□ 2.08
SUB1-205ENST00000504789 ROCK2O75116 1388 aaKnown RBP28.02■■■□□ 2.08
SUB1-205ENST00000504789 ACEP12821 1306 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms