RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 DHX57Q6P158 1386 aaKnown RBP37.08■■■■□ 3.53
PVT1-201ENST00000504719 PLEKHH1Q9ULM0 1364 aa37.08■■■■□ 3.53
PVT1-201ENST00000504719 SIRT1Q96EB6 747 aa37.07■■■■□ 3.52
PVT1-201ENST00000504719 DCAF11Q8TEB1 546 aa37.06■■■■□ 3.52
PVT1-201ENST00000504719 DDX17Q92841 729 aaKnown RBP37.06■■■■□ 3.52
PVT1-201ENST00000504719 ORAI2Q96SN7 254 aa37.06■■■■□ 3.52
PVT1-201ENST00000504719 KDM2AQ9Y2K7 1162 aa37.05■■■■□ 3.52
PVT1-201ENST00000504719 STAC3Q96MF2 364 aa37.03■■■■□ 3.52
PVT1-201ENST00000504719 TRIM26Q12899 539 aaPredicted RBP37.02■■■■□ 3.52
PVT1-201ENST00000504719 LRP6O75581 1613 aa37.02■■■■□ 3.52
PVT1-201ENST00000504719 LRRC59Q96AG4 307 aaKnown RBP37.01■■■■□ 3.52
PVT1-201ENST00000504719 ADGRB1O14514 1584 aa36.99■■■■□ 3.51
PVT1-201ENST00000504719 DLC1Q96QB1 1528 aa36.95■■■■□ 3.51
PVT1-201ENST00000504719 FMN2Q9NZ56 1722 aa36.95■■■■□ 3.51
PVT1-201ENST00000504719 SOS2Q07890 1332 aaPredicted RBP36.94■■■■□ 3.5
PVT1-201ENST00000504719 ESCO1Q5FWF5 840 aa36.93■■■■□ 3.5
PVT1-201ENST00000504719 POTEAQ6S8J7 498 aa36.93■■■■□ 3.5
PVT1-201ENST00000504719 MEX3CQ5U5Q3 659 aaKnown RBP36.91■■■■□ 3.5
PVT1-201ENST00000504719 PRAM1Q96QH2 718 aa36.91■■■■□ 3.5
PVT1-201ENST00000504719 PNPLA6Q8IY17 1366 aa36.91■■■■□ 3.5
PVT1-201ENST00000504719 NUTM2FA1L443 756 aa36.9■■■■□ 3.5
PVT1-201ENST00000504719 NUTM2BA6NNL0 878 aaPredicted RBP36.88■■■■□ 3.49
PVT1-201ENST00000504719 NUTM2EB1AL46 878 aaPredicted RBP36.88■■■■□ 3.49
PVT1-201ENST00000504719 NUTM2AQ8IVF1 878 aaPredicted RBP36.88■■■■□ 3.49
PVT1-201ENST00000504719 SAFB2Q14151 953 aaKnown RBP eCLIP36.85■■■■□ 3.49
PVT1-201ENST00000504719 POGKQ9P215 609 aa36.85■■■■□ 3.49
PVT1-201ENST00000504719 TRAK1Q9UPV9 953 aa36.85■■■■□ 3.49
PVT1-201ENST00000504719 NPHP3Q7Z494 1330 aa36.85■■■■□ 3.49
PVT1-201ENST00000504719 RGPD8O14715 1765 aaPredicted RBP36.83■■■■□ 3.49
PVT1-201ENST00000504719 FOXO3O43524 673 aa36.8■■■■□ 3.48
PVT1-201ENST00000504719 PXDNQ92626 1479 aa36.8■■■■□ 3.48
PVT1-201ENST00000504719 KIF1AQ12756 1690 aa36.79■■■■□ 3.48
PVT1-201ENST00000504719 ADGRB2O60241 1585 aa36.78■■■■□ 3.48
PVT1-201ENST00000504719 KIAA1210Q9ULL0 1709 aa36.77■■■■□ 3.48
PVT1-201ENST00000504719 ZNF772Q68DY9 489 aaPredicted RBP36.76■■■■□ 3.48
PVT1-201ENST00000504719 COL22A1Q8NFW1 1626 aaPredicted RBP36.74■■■■□ 3.47
PVT1-201ENST00000504719 ARHGEF28Q8N1W1 1705 aaKnown RBP36.73■■■■□ 3.47
PVT1-201ENST00000504719 XPCQ01831 940 aaPredicted RBP36.73■■■■□ 3.47
PVT1-201ENST00000504719 USP32Q8NFA0 1604 aa36.7■■■■□ 3.47
PVT1-201ENST00000504719 PHF8Q9UPP1 1060 aa36.69■■■■□ 3.46
PVT1-201ENST00000504719 ANKARQ7Z5J8 1434 aa36.68■■■■□ 3.46
PVT1-201ENST00000504719 AFF2P51816 1311 aa36.68■■■■□ 3.46
PVT1-201ENST00000504719 MINK1Q8N4C8 1332 aaPredicted RBP36.68■■■■□ 3.46
PVT1-201ENST00000504719 HIRIP3Q9BW71 556 aaPredicted RBP36.68■■■■□ 3.46
PVT1-201ENST00000504719 SIN3AQ96ST3 1273 aa36.67■■■■□ 3.46
PVT1-201ENST00000504719 C8orf37Q96NL8 207 aa36.66■■■■□ 3.46
PVT1-201ENST00000504719 ADAMTS2O95450 1211 aa36.64■■■■□ 3.46
PVT1-201ENST00000504719 KRT28Q7Z3Y7 464 aa36.64■■■■□ 3.46
PVT1-201ENST00000504719 L3MBTL2Q969R5 705 aa36.63■■■■□ 3.45
PVT1-201ENST00000504719 NBPF1Q3BBV0 1214 aa36.62■■■■□ 3.45
PVT1-201ENST00000504719 WASLO00401 505 aaPredicted RBP36.61■■■■□ 3.45
PVT1-201ENST00000504719 SPATA31A3Q5VYP0 1347 aa36.6■■■■□ 3.45
PVT1-201ENST00000504719 EIF3AQ14152 1382 aaKnown RBP36.6■■■■□ 3.45
PVT1-201ENST00000504719 TULP4Q9NRJ4 1543 aa36.59■■■■□ 3.45
PVT1-201ENST00000504719 NEUROD1Q13562 356 aa36.57■■■■□ 3.44
PVT1-201ENST00000504719 NGLY1Q96IV0 654 aa36.57■■■■□ 3.44
PVT1-201ENST00000504719 PRR36Q9H6K5 1346 aa36.57■■■■□ 3.44
PVT1-201ENST00000504719 PSME1Q06323 249 aa36.56■■■■□ 3.44
PVT1-201ENST00000504719 PMFBP1Q8TBY8 1022 aa36.56■■■■□ 3.44
PVT1-201ENST00000504719 MARF1Q9Y4F3 1742 aaKnown RBP36.56■■■■□ 3.44
PVT1-201ENST00000504719 RXRBP28702 533 aa36.55■■■■□ 3.44
PVT1-201ENST00000504719 TNS3Q68CZ2 1445 aa36.52■■■■□ 3.44
PVT1-201ENST00000504719 SBNO1A3KN83 1393 aa36.52■■■■□ 3.44
PVT1-201ENST00000504719 QTRT2Q9H974 415 aaKnown RBP36.5■■■■□ 3.43
PVT1-201ENST00000504719 PCGF6Q9BYE7 350 aa36.49■■■■□ 3.43
PVT1-201ENST00000504719 FNBP4Q8N3X1 1017 aaPredicted RBP36.48■■■■□ 3.43
PVT1-201ENST00000504719 TRPM1Q7Z4N2 1603 aa36.47■■■■□ 3.43
PVT1-201ENST00000504719 ITSN1Q15811 1721 aa36.47■■■■□ 3.43
PVT1-201ENST00000504719 TRPM3Q9HCF6 1732 aaPredicted RBP36.45■■■■□ 3.43
PVT1-201ENST00000504719 ATP7BP35670 1465 aa36.45■■■■□ 3.43
PVT1-201ENST00000504719 CDK12Q9NYV4 1490 aaPredicted RBP36.45■■■■□ 3.43
PVT1-201ENST00000504719 CDK19Q9BWU1 502 aa36.45■■■■□ 3.43
PVT1-201ENST00000504719 USP21Q9UK80 565 aa36.45■■■■□ 3.43
PVT1-201ENST00000504719 NUDT16Q96DE0 195 aaKnown RBP36.44■■■■□ 3.42
PVT1-201ENST00000504719 RBM6P78332 1123 aaKnown RBP36.43■■■■□ 3.42
PVT1-201ENST00000504719 ARHGEF10O15013 1369 aa36.41■■■■□ 3.42
PVT1-201ENST00000504719 GPRASP1Q5JY77 1395 aa36.41■■■■□ 3.42
PVT1-201ENST00000504719 CENPJQ9HC77 1338 aaPredicted RBP36.4■■■■□ 3.42
PVT1-201ENST00000504719 LMOD2Q6P5Q4 547 aa36.39■■■■□ 3.42
PVT1-201ENST00000504719 NGDNQ8NEJ9 315 aaKnown RBP36.38■■■■□ 3.41
PVT1-201ENST00000504719 TRPC5Q9UL62 973 aaPredicted RBP36.38■■■■□ 3.41
PVT1-201ENST00000504719 ALS2Q96Q42 1657 aa36.38■■■■□ 3.41
PVT1-201ENST00000504719 ABCA3Q99758 1704 aa36.37■■■■□ 3.41
PVT1-201ENST00000504719 TOPAZ1Q8N9V7 1692 aa36.37■■■■□ 3.41
PVT1-201ENST00000504719 QRICH2Q9H0J4 1663 aa36.37■■■■□ 3.41
PVT1-201ENST00000504719 CABLES1Q8TDN4 633 aa36.36■■■■□ 3.41
PVT1-201ENST00000504719 BCL9LQ86UU0 1499 aa36.36■■■■□ 3.41
PVT1-201ENST00000504719 ATRNO75882 1429 aa36.35■■■■□ 3.41
PVT1-201ENST00000504719 HAP1P54257 671 aaPredicted RBP36.33■■■■□ 3.41
PVT1-201ENST00000504719 ROCK2O75116 1388 aaKnown RBP36.32■■■■□ 3.4
PVT1-201ENST00000504719 CCDC61Q9Y6R9 512 aa36.32■■■■□ 3.4
PVT1-201ENST00000504719 RGS12O14924 1447 aa36.32■■■■□ 3.4
PVT1-201ENST00000504719 NBPF8Q3BBV2 869 aa36.31■■■■□ 3.4
PVT1-201ENST00000504719 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.31■■■■□ 3.4
PVT1-201ENST00000504719 SLIT2O94813 1529 aa36.3■■■■□ 3.4
PVT1-201ENST00000504719 PLEKHG5O94827 1062 aa36.3■■■■□ 3.4
PVT1-201ENST00000504719 POLR3AO14802 1390 aaPredicted RBP36.27■■■■□ 3.4
PVT1-201ENST00000504719 PLEKHG3A1L390 1219 aa36.27■■■■□ 3.4
PVT1-201ENST00000504719 PAK3O75914 559 aaPredicted RBP36.25■■■■□ 3.39
PVT1-201ENST00000504719 SRPK2P78362 688 aaKnown RBP36.25■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms