RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
MATR3-210ENST00000504643 LAMC1P11047 1609 aa11.53□□□□□ -0.56
MATR3-210ENST00000504643 TECPR2O15040 1411 aa11.52□□□□□ -0.56
MATR3-210ENST00000504643 TRPC5Q9UL62 973 aaPredicted RBP11.52□□□□□ -0.56
MATR3-210ENST00000504643 NALCNQ8IZF0 1738 aa11.52□□□□□ -0.57
MATR3-210ENST00000504643 DDX17Q92841 729 aaKnown RBP11.52□□□□□ -0.57
MATR3-210ENST00000504643 ADGRF5Q8IZF2 1346 aa11.52□□□□□ -0.57
MATR3-210ENST00000504643 SPATA31E1Q6ZUB1 1445 aa11.51□□□□□ -0.57
MATR3-210ENST00000504643 PPLO60437 1756 aa11.51□□□□□ -0.57
MATR3-210ENST00000504643 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
MATR3-210ENST00000504643 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
MATR3-210ENST00000504643 ADAMTS2O95450 1211 aa11.51□□□□□ -0.57
MATR3-210ENST00000504643 USP21Q9UK80 565 aa11.51□□□□□ -0.57
MATR3-210ENST00000504643 SETD1AO15047 1707 aaKnown RBP11.5□□□□□ -0.57
MATR3-210ENST00000504643 C14orf93Q9H972 538 aaKnown RBP11.5□□□□□ -0.57
MATR3-210ENST00000504643 STK26Q9P289 416 aa11.5□□□□□ -0.57
MATR3-210ENST00000504643 CDC42BPGQ6DT37 1551 aa11.5□□□□□ -0.57
MATR3-210ENST00000504643 DHX57Q6P158 1386 aaKnown RBP11.49□□□□□ -0.57
MATR3-210ENST00000504643 PSME1Q06323 249 aa11.49□□□□□ -0.57
MATR3-210ENST00000504643 FOXO3O43524 673 aa11.48□□□□□ -0.57
MATR3-210ENST00000504643 PIK3C2GO75747 1445 aa11.47□□□□□ -0.57
MATR3-210ENST00000504643 WAPLQ7Z5K2 1190 aa11.47□□□□□ -0.57
MATR3-210ENST00000504643 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
MATR3-210ENST00000504643 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
MATR3-210ENST00000504643 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.57
MATR3-210ENST00000504643 HRCP23327 699 aa11.46□□□□□ -0.58
MATR3-210ENST00000504643 TMEM132EQ6IEE7 984 aa11.46□□□□□ -0.58
MATR3-210ENST00000504643 COL22A1Q8NFW1 1626 aaPredicted RBP11.45□□□□□ -0.58
MATR3-210ENST00000504643 RGS12O14924 1447 aa11.44□□□□□ -0.58
MATR3-210ENST00000504643 KRT28Q7Z3Y7 464 aa11.44□□□□□ -0.58
MATR3-210ENST00000504643 MYOM2P54296 1465 aa11.44□□□□□ -0.58
MATR3-210ENST00000504643 SPATA31A3Q5VYP0 1347 aa11.44□□□□□ -0.58
MATR3-210ENST00000504643 PXDNQ92626 1479 aa11.44□□□□□ -0.58
MATR3-210ENST00000504643 ATRNO75882 1429 aa11.43□□□□□ -0.58
MATR3-210ENST00000504643 POGKQ9P215 609 aa11.43□□□□□ -0.58
MATR3-210ENST00000504643 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
MATR3-210ENST00000504643 KNDC1Q76NI1 1749 aa11.43□□□□□ -0.58
MATR3-210ENST00000504643 EIF3AQ14152 1382 aaKnown RBP11.43□□□□□ -0.58
MATR3-210ENST00000504643 NRXN1Q9ULB1 1477 aa11.43□□□□□ -0.58
MATR3-210ENST00000504643 GJD4Q96KN9 370 aaPredicted RBP11.42□□□□□ -0.58
MATR3-210ENST00000504643 HAP1P54257 671 aaPredicted RBP11.42□□□□□ -0.58
MATR3-210ENST00000504643 CFAP70Q5T0N1 1121 aa11.42□□□□□ -0.58
MATR3-210ENST00000504643 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
MATR3-210ENST00000504643 IFT172Q9UG01 1749 aa11.41□□□□□ -0.58
MATR3-210ENST00000504643 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
MATR3-210ENST00000504643 NUTM2FA1L443 756 aa11.41□□□□□ -0.58
MATR3-210ENST00000504643 KIF1AQ12756 1690 aa11.41□□□□□ -0.58
MATR3-210ENST00000504643 ARHGEF10O15013 1369 aa11.4□□□□□ -0.58
MATR3-210ENST00000504643 PLEKHH1Q9ULM0 1364 aa11.4□□□□□ -0.58
MATR3-210ENST00000504643 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
MATR3-210ENST00000504643 ANKARQ7Z5J8 1434 aa11.4□□□□□ -0.58
MATR3-210ENST00000504643 XPCQ01831 940 aaPredicted RBP11.4□□□□□ -0.58
MATR3-210ENST00000504643 DLC1Q96QB1 1528 aa11.4□□□□□ -0.59
MATR3-210ENST00000504643 BCL9LQ86UU0 1499 aa11.39□□□□□ -0.59
MATR3-210ENST00000504643 RAB3GAP2Q9H2M9 1393 aa11.39□□□□□ -0.59
MATR3-210ENST00000504643 FMN2Q9NZ56 1722 aa11.38□□□□□ -0.59
MATR3-210ENST00000504643 ZRANB1Q9UGI0 708 aa11.38□□□□□ -0.59
MATR3-210ENST00000504643 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
MATR3-210ENST00000504643 GPRASP1Q5JY77 1395 aa11.37□□□□□ -0.59
MATR3-210ENST00000504643 SLIT2O94813 1529 aa11.37□□□□□ -0.59
MATR3-210ENST00000504643 VPS72Q15906 364 aa11.36□□□□□ -0.59
MATR3-210ENST00000504643 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
MATR3-210ENST00000504643 LMOD2Q6P5Q4 547 aa11.35□□□□□ -0.59
MATR3-210ENST00000504643 ONECUT3O60422 494 aaPredicted RBP11.35□□□□□ -0.59
MATR3-210ENST00000504643 SF3B2Q13435 895 aaKnown RBP11.35□□□□□ -0.59
MATR3-210ENST00000504643 SAFB2Q14151 953 aaKnown RBP eCLIP11.34□□□□□ -0.59
MATR3-210ENST00000504643 TRAK1Q9UPV9 953 aa11.34□□□□□ -0.59
MATR3-210ENST00000504643 MARF1Q9Y4F3 1742 aaKnown RBP11.34□□□□□ -0.59
MATR3-210ENST00000504643 WASLO00401 505 aaPredicted RBP11.34□□□□□ -0.59
MATR3-210ENST00000504643 KDM2AQ9Y2K7 1162 aa11.34□□□□□ -0.59
MATR3-210ENST00000504643 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.34□□□□□ -0.59
MATR3-210ENST00000504643 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
MATR3-210ENST00000504643 NGDNQ8NEJ9 315 aaKnown RBP11.32□□□□□ -0.6
MATR3-210ENST00000504643 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
MATR3-210ENST00000504643 CCDC9Q9Y3X0 531 aaKnown RBP11.32□□□□□ -0.6
MATR3-210ENST00000504643 ADGRB2O60241 1585 aa11.32□□□□□ -0.6
MATR3-210ENST00000504643 BLMP54132 1417 aaPredicted RBP11.32□□□□□ -0.6
MATR3-210ENST00000504643 SEPT12Q8IYM1 358 aa11.31□□□□□ -0.6
MATR3-210ENST00000504643 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
MATR3-210ENST00000504643 ADGRB1O14514 1584 aa11.31□□□□□ -0.6
MATR3-210ENST00000504643 MINK1Q8N4C8 1332 aaPredicted RBP11.31□□□□□ -0.6
MATR3-210ENST00000504643 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
MATR3-210ENST00000504643 FAM83GA6ND36 823 aa11.3□□□□□ -0.6
MATR3-210ENST00000504643 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
MATR3-210ENST00000504643 TULP4Q9NRJ4 1543 aa11.29□□□□□ -0.6
MATR3-210ENST00000504643 HIRIP3Q9BW71 556 aaPredicted RBP11.29□□□□□ -0.6
MATR3-210ENST00000504643 NWD2Q9ULI1 1742 aa11.28□□□□□ -0.6
MATR3-210ENST00000504643 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
MATR3-210ENST00000504643 PAK3O75914 559 aaPredicted RBP11.27□□□□□ -0.6
MATR3-210ENST00000504643 BTG4Q9NY30 223 aa11.27□□□□□ -0.6
MATR3-210ENST00000504643 CCDC61Q9Y6R9 512 aa11.27□□□□□ -0.6
MATR3-210ENST00000504643 GLI3P10071 1580 aa11.27□□□□□ -0.61
MATR3-210ENST00000504643 PRR36Q9H6K5 1346 aa11.26□□□□□ -0.61
MATR3-210ENST00000504643 A0A0G2JS52 829 aa11.26□□□□□ -0.61
MATR3-210ENST00000504643 BAG6P46379 1132 aa11.26□□□□□ -0.61
MATR3-210ENST00000504643 MYT1Q01538 1121 aa11.26□□□□□ -0.61
MATR3-210ENST00000504643 CDK19Q9BWU1 502 aa11.26□□□□□ -0.61
MATR3-210ENST00000504643 PLEKHG3A1L390 1219 aa11.25□□□□□ -0.61
MATR3-210ENST00000504643 PRDM11Q9NQV5 511 aa11.25□□□□□ -0.61
MATR3-210ENST00000504643 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms