RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 HMMRO75330 724 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 DBN1Q16643 649 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 RUFY1Q96T51 708 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 CA8P35219 290 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 NBPF3Q9H094 633 aa7.57□□□□□ -1.2
CLCN3-204ENST00000504131 GEMIN8Q9NWZ8 242 aaKnown RBP7.57□□□□□ -1.2
CLCN3-204ENST00000504131 STK24Q9Y6E0 443 aa7.56□□□□□ -1.2
CLCN3-204ENST00000504131 CDR1P51861 262 aa7.56□□□□□ -1.2
CLCN3-204ENST00000504131 RPUSD2Q8IZ73 545 aaKnown RBP7.56□□□□□ -1.2
CLCN3-204ENST00000504131 GBP4Q96PP9 640 aa7.56□□□□□ -1.2
CLCN3-204ENST00000504131 UIMC1Q96RL1 719 aa7.56□□□□□ -1.2
CLCN3-204ENST00000504131 DDX49Q9Y6V7 483 aaKnown RBP7.56□□□□□ -1.2
CLCN3-204ENST00000504131 LCA5Q86VQ0 697 aa7.56□□□□□ -1.2
CLCN3-204ENST00000504131 MAP2K2P36507 400 aa7.56□□□□□ -1.2
CLCN3-204ENST00000504131 ZNHIT6Q9NWK9 470 aaKnown RBP7.56□□□□□ -1.2
CLCN3-204ENST00000504131 DYTNA2CJ06 578 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 EGFL6Q8IUX8 553 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 ANKRD20A12PQ8NF67 263 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 SH3BP1Q9Y3L3 701 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 GOLGA6L10A6NI86 522 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
CLCN3-204ENST00000504131 ZRSR1Q15695 479 aaKnown RBP7.55□□□□□ -1.2
CLCN3-204ENST00000504131 EFCC1Q9HA90 598 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 CLCN1P35523 988 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 MSL3Q8N5Y2 521 aaKnown RBP7.55□□□□□ -1.2
CLCN3-204ENST00000504131 KIF5CO60282 957 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 RAI14Q9P0K7 980 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 HMGXB3Q12766 1538 aa7.55□□□□□ -1.2
CLCN3-204ENST00000504131 WDR43Q15061 677 aaKnown RBP eCLIP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 BTN2A1Q7KYR7 527 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 TMEM51Q9NW97 253 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 ESPNB1AK53 854 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 TTLL5Q6EMB2 1281 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 TRIML1Q8N9V2 468 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 SMC3Q9UQE7 1217 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 ECM2O94769 699 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 NFKBIBQ15653 356 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 ENOX2Q16206 610 aaKnown RBP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 RASSF4Q9H2L5 321 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 RMI1Q9H9A7 625 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 CHGAP10645 457 aaKnown RBP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 DDX12PQ92771 950 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 TMX1Q9H3N1 280 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 KIF1CO43896 1103 aaKnown RBP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 NBPF7P0C2Y1 421 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 ZKSCAN8Q15776 578 aaPredicted RBP7.54□□□□□ -1.2
CLCN3-204ENST00000504131 RASSF8Q8NHQ8 419 aa7.54□□□□□ -1.2
CLCN3-204ENST00000504131 HSP90AB1P08238 724 aaKnown RBP7.53□□□□□ -1.2
CLCN3-204ENST00000504131 HNRNPUQ00839 825 aaKnown RBP eCLIP7.53□□□□□ -1.2
CLCN3-204ENST00000504131 SF3A1Q15459 793 aaKnown RBP7.53□□□□□ -1.2
CLCN3-204ENST00000504131 B4GALNT3Q6L9W6 998 aa7.53□□□□□ -1.2
CLCN3-204ENST00000504131 HSPA5P11021 654 aaKnown RBP7.53□□□□□ -1.2
CLCN3-204ENST00000504131 ATL2Q8NHH9 583 aa7.53□□□□□ -1.2
CLCN3-204ENST00000504131 TCHPQ9BT92 498 aa7.53□□□□□ -1.2
CLCN3-204ENST00000504131 YY1AP1Q9H869 796 aa7.53□□□□□ -1.2
CLCN3-204ENST00000504131 NEBLO76041 1014 aa7.53□□□□□ -1.2
CLCN3-204ENST00000504131 MICAL1Q8TDZ2 1067 aa7.53□□□□□ -1.2
CLCN3-204ENST00000504131 NAP1L4Q99733 375 aaKnown RBP7.53□□□□□ -1.2
CLCN3-204ENST00000504131 HDGFL1Q5TGJ6 251 aa7.52□□□□□ -1.2
CLCN3-204ENST00000504131 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 KRBA2Q6ZNG9 492 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 EP400NLQ6ZTU2 488 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 RNF168Q8IYW5 571 aaPredicted RBP7.52□□□□□ -1.21
CLCN3-204ENST00000504131 RIPOR2Q9Y4F9 1068 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 ADRA2BP18089 450 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 MECOMQ03112 1051 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 STK26Q9P289 416 aa7.52□□□□□ -1.21
CLCN3-204ENST00000504131 GOLGA6L10A0A0M3HER8 536 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 PPFIA3O75145 1194 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 BRPF1P55201 1214 aaPredicted RBP7.51□□□□□ -1.21
CLCN3-204ENST00000504131 TPM1P09493 284 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 ATP6V1AP38606 617 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 SESN3P58005 492 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 DDX10Q13206 875 aaKnown RBP7.51□□□□□ -1.21
CLCN3-204ENST00000504131 PPP4R4Q6NUP7 873 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 FAM161AQ3B820 660 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 MRFAP1L1Q96HT8 127 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 MPP4Q96JB8 637 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 FAM210AQ96ND0 272 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 NOL10Q9BSC4 688 aaKnown RBP7.51□□□□□ -1.21
CLCN3-204ENST00000504131 KIF2CQ99661 725 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 SPOCK3Q9BQ16 436 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 UBAP1Q9NZ09 502 aa7.51□□□□□ -1.21
CLCN3-204ENST00000504131 RNF214Q8ND24 703 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 ZBTB22O15209 634 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 KCNA1Q09470 495 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 CT47B1P0C2W7 299 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-204ENST00000504131 PDCL2Q8N4E4 241 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 MIPOL1Q8TD10 442 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 DNAAF4Q8WXU2 420 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 AK7Q96M32 723 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 USP25Q9UHP3 1055 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 RSPH14Q9UHP6 348 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 DYNC1I1O14576 645 aa7.5□□□□□ -1.21
CLCN3-204ENST00000504131 IBSPP21815 317 aaPredicted RBP7.5□□□□□ -1.21
CLCN3-204ENST00000504131 MNAT1P51948 309 aa7.49□□□□□ -1.21
CLCN3-204ENST00000504131 CC2D1AQ6P1N0 951 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-204ENST00000504131 TTC31Q49AM3 519 aaPredicted RBP7.49□□□□□ -1.21
CLCN3-204ENST00000504131 TSHZ1Q6ZSZ6 1077 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms