RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 WASHC2AQ641Q2 1341 aa12.95□□□□□ -0.34
PDLIM5-207ENST00000503974 NUTM2DQ5VT03 806 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-207ENST00000503974 ASXL1Q8IXJ9 1541 aa12.95□□□□□ -0.34
PDLIM5-207ENST00000503974 NAP1L2Q9ULW6 460 aaPredicted RBP12.95□□□□□ -0.34
PDLIM5-207ENST00000503974 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
PDLIM5-207ENST00000503974 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
PDLIM5-207ENST00000503974 RALGAPBQ86X10 1494 aa12.93□□□□□ -0.34
PDLIM5-207ENST00000503974 NWD1Q149M9 1564 aa12.92□□□□□ -0.34
PDLIM5-207ENST00000503974 C14orf93Q9H972 538 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-207ENST00000503974 PIK3R4Q99570 1358 aa12.92□□□□□ -0.34
PDLIM5-207ENST00000503974 RRP9O43818 475 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-207ENST00000503974 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
PDLIM5-207ENST00000503974 CHD2O14647 1828 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-207ENST00000503974 XRN1Q8IZH2 1706 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-207ENST00000503974 NBPF8Q3BBV2 869 aa12.91□□□□□ -0.34
PDLIM5-207ENST00000503974 SAMD1Q6SPF0 538 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-207ENST00000503974 NAP1L5Q96NT1 182 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-207ENST00000503974 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
PDLIM5-207ENST00000503974 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
PDLIM5-207ENST00000503974 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
PDLIM5-207ENST00000503974 METP08581 1390 aa12.89□□□□□ -0.35
PDLIM5-207ENST00000503974 CFAP70Q5T0N1 1121 aa12.89□□□□□ -0.35
PDLIM5-207ENST00000503974 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
PDLIM5-207ENST00000503974 TECPR2O15040 1411 aa12.88□□□□□ -0.35
PDLIM5-207ENST00000503974 PTPRUQ92729 1446 aa12.88□□□□□ -0.35
PDLIM5-207ENST00000503974 STRCP1A6NGW2 1772 aa12.87□□□□□ -0.35
PDLIM5-207ENST00000503974 CPS1P31327 1500 aa12.87□□□□□ -0.35
PDLIM5-207ENST00000503974 PAK3O75914 559 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-207ENST00000503974 HSP90AA2PQ14568 343 aaPredicted RBP12.87□□□□□ -0.35
PDLIM5-207ENST00000503974 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
PDLIM5-207ENST00000503974 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
PDLIM5-207ENST00000503974 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
PDLIM5-207ENST00000503974 PRDM4Q9UKN5 801 aa12.85□□□□□ -0.35
PDLIM5-207ENST00000503974 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-207ENST00000503974 YTHDC2Q9H6S0 1430 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-207ENST00000503974 PTCH1Q13635 1447 aa12.85□□□□□ -0.35
PDLIM5-207ENST00000503974 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-207ENST00000503974 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
PDLIM5-207ENST00000503974 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
PDLIM5-207ENST00000503974 NBPF1Q3BBV0 1214 aa12.84□□□□□ -0.35
PDLIM5-207ENST00000503974 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
PDLIM5-207ENST00000503974 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-207ENST00000503974 ROCK2O75116 1388 aaKnown RBP12.84□□□□□ -0.35
PDLIM5-207ENST00000503974 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
PDLIM5-207ENST00000503974 LTBP4Q8N2S1 1624 aa12.83□□□□□ -0.35
PDLIM5-207ENST00000503974 KCNA6P17658 529 aa12.82□□□□□ -0.36
PDLIM5-207ENST00000503974 BBXQ8WY36 941 aaPredicted RBP12.82□□□□□ -0.36
PDLIM5-207ENST00000503974 TMEM132EQ6IEE7 984 aa12.82□□□□□ -0.36
PDLIM5-207ENST00000503974 FAM135BQ49AJ0 1406 aa12.82□□□□□ -0.36
PDLIM5-207ENST00000503974 CHMP4BQ9H444 224 aaKnown RBP12.81□□□□□ -0.36
PDLIM5-207ENST00000503974 GTF2E1P29083 439 aaPredicted RBP12.81□□□□□ -0.36
PDLIM5-207ENST00000503974 ZNF335Q9H4Z2 1342 aaPredicted RBP12.8□□□□□ -0.36
PDLIM5-207ENST00000503974 SIRT1Q96EB6 747 aa12.8□□□□□ -0.36
PDLIM5-207ENST00000503974 AMOTL2Q9Y2J4 779 aa12.8□□□□□ -0.36
PDLIM5-207ENST00000503974 XIRP1Q702N8 1843 aaKnown RBP12.79□□□□□ -0.36
PDLIM5-207ENST00000503974 ROBO2Q9HCK4 1378 aa12.79□□□□□ -0.36
PDLIM5-207ENST00000503974 LRRC7Q96NW7 1537 aa12.78□□□□□ -0.36
PDLIM5-207ENST00000503974 HAP1P54257 671 aaPredicted RBP12.78□□□□□ -0.36
PDLIM5-207ENST00000503974 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
PDLIM5-207ENST00000503974 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
PDLIM5-207ENST00000503974 CALD1Q05682 793 aaKnown RBP12.77□□□□□ -0.36
PDLIM5-207ENST00000503974 USP35Q9P2H5 1018 aa12.77□□□□□ -0.36
PDLIM5-207ENST00000503974 ADGRB2O60241 1585 aa12.77□□□□□ -0.37
PDLIM5-207ENST00000503974 QRICH2Q9H0J4 1663 aa12.76□□□□□ -0.37
PDLIM5-207ENST00000503974 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
PDLIM5-207ENST00000503974 NALCNQ8IZF0 1738 aa12.76□□□□□ -0.37
PDLIM5-207ENST00000503974 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
PDLIM5-207ENST00000503974 USP47Q96K76 1375 aa12.76□□□□□ -0.37
PDLIM5-207ENST00000503974 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
PDLIM5-207ENST00000503974 SBNO2Q9Y2G9 1366 aa12.75□□□□□ -0.37
PDLIM5-207ENST00000503974 STK26Q9P289 416 aa12.75□□□□□ -0.37
PDLIM5-207ENST00000503974 TRAK1Q9UPV9 953 aa12.75□□□□□ -0.37
PDLIM5-207ENST00000503974 ADGRL3Q9HAR2 1447 aa12.74□□□□□ -0.37
PDLIM5-207ENST00000503974 IQSEC2Q5JU85 1478 aa12.74□□□□□ -0.37
PDLIM5-207ENST00000503974 TMEM94Q12767 1356 aa12.73□□□□□ -0.37
PDLIM5-207ENST00000503974 CDC42BPGQ6DT37 1551 aa12.73□□□□□ -0.37
PDLIM5-207ENST00000503974 PRAM1Q96QH2 718 aa12.73□□□□□ -0.37
PDLIM5-207ENST00000503974 CNKSR2Q8WXI2 1034 aa12.72□□□□□ -0.37
PDLIM5-207ENST00000503974 CENPJQ9HC77 1338 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-207ENST00000503974 DCCP43146 1447 aa12.72□□□□□ -0.37
PDLIM5-207ENST00000503974 HSP90AA1P07900 732 aaKnown RBP12.71□□□□□ -0.37
PDLIM5-207ENST00000503974 WAPLQ7Z5K2 1190 aa12.71□□□□□ -0.37
PDLIM5-207ENST00000503974 PROSER2Q86WR7 435 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-207ENST00000503974 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
PDLIM5-207ENST00000503974 NEFMP07197 916 aa12.71□□□□□ -0.38
PDLIM5-207ENST00000503974 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDLIM5-207ENST00000503974 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
PDLIM5-207ENST00000503974 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 RGS3P49796 1198 aa12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 EIF4G2P78344 907 aaKnown RBP eCLIP12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 FMN2Q9NZ56 1722 aa12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 CANXP27824 592 aaKnown RBP12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 TESK2Q96S53 571 aa12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 POGKQ9P215 609 aa12.69□□□□□ -0.38
PDLIM5-207ENST00000503974 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
PDLIM5-207ENST00000503974 HSPA5P11021 654 aaKnown RBP12.68□□□□□ -0.38
PDLIM5-207ENST00000503974 TEX2Q8IWB9 1127 aa12.68□□□□□ -0.38
PDLIM5-207ENST00000503974 IPO9Q96P70 1041 aaKnown RBP12.67□□□□□ -0.38
PDLIM5-207ENST00000503974 C19orf44Q9H6X5 657 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms