RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 POGKQ9P215 609 aa23.55■■□□□ 1.36
SCLT1-205ENST00000503401 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
SCLT1-205ENST00000503401 SIRT1Q96EB6 747 aa23.54■■□□□ 1.36
SCLT1-205ENST00000503401 RALGAPBQ86X10 1494 aa23.53■■□□□ 1.36
SCLT1-205ENST00000503401 ATF3P18847 181 aa23.52■■□□□ 1.36
SCLT1-205ENST00000503401 CADPS2Q86UW7 1296 aa23.5■■□□□ 1.35
SCLT1-205ENST00000503401 GPRASP1Q5JY77 1395 aa23.49■■□□□ 1.35
SCLT1-205ENST00000503401 ILDR1Q86SU0 546 aaPredicted RBP23.49■■□□□ 1.35
SCLT1-205ENST00000503401 CARD11Q9BXL7 1154 aa23.48■■□□□ 1.35
SCLT1-205ENST00000503401 DCCP43146 1447 aa23.48■■□□□ 1.35
SCLT1-205ENST00000503401 HIRIP3Q9BW71 556 aaPredicted RBP23.48■■□□□ 1.35
SCLT1-205ENST00000503401 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
SCLT1-205ENST00000503401 MINK1Q8N4C8 1332 aaPredicted RBP23.47■■□□□ 1.35
SCLT1-205ENST00000503401 CDC42BPGQ6DT37 1551 aa23.46■■□□□ 1.35
SCLT1-205ENST00000503401 MST1RQ04912 1400 aa23.45■■□□□ 1.34
SCLT1-205ENST00000503401 ROBO1Q9Y6N7 1651 aa23.44■■□□□ 1.34
SCLT1-205ENST00000503401 NUTM2FA1L443 756 aa23.44■■□□□ 1.34
SCLT1-205ENST00000503401 QRICH2Q9H0J4 1663 aa23.43■■□□□ 1.34
SCLT1-205ENST00000503401 CENPJQ9HC77 1338 aaPredicted RBP23.42■■□□□ 1.34
SCLT1-205ENST00000503401 FMN2Q9NZ56 1722 aa23.41■■□□□ 1.34
SCLT1-205ENST00000503401 ADGRB2O60241 1585 aa23.41■■□□□ 1.34
SCLT1-205ENST00000503401 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.34
SCLT1-205ENST00000503401 RGPD8O14715 1765 aaPredicted RBP23.39■■□□□ 1.33
SCLT1-205ENST00000503401 EIF3AQ14152 1382 aaKnown RBP23.38■■□□□ 1.33
SCLT1-205ENST00000503401 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
SCLT1-205ENST00000503401 WASLO00401 505 aaPredicted RBP23.35■■□□□ 1.33
SCLT1-205ENST00000503401 ORAI2Q96SN7 254 aa23.35■■□□□ 1.33
SCLT1-205ENST00000503401 HSPA1LP34931 641 aa23.33■■□□□ 1.33
SCLT1-205ENST00000503401 USP32Q8NFA0 1604 aa23.33■■□□□ 1.33
SCLT1-205ENST00000503401 ESCO1Q5FWF5 840 aa23.33■■□□□ 1.32
SCLT1-205ENST00000503401 USP47Q96K76 1375 aa23.33■■□□□ 1.32
SCLT1-205ENST00000503401 CDK19Q9BWU1 502 aa23.32■■□□□ 1.32
SCLT1-205ENST00000503401 DDX17Q92841 729 aaKnown RBP23.31■■□□□ 1.32
SCLT1-205ENST00000503401 ST20-MTHFSA0A0A6YYL1 179 aa23.3■■□□□ 1.32
SCLT1-205ENST00000503401 TULP4Q9NRJ4 1543 aa23.3■■□□□ 1.32
SCLT1-205ENST00000503401 PRR36Q9H6K5 1346 aa23.3■■□□□ 1.32
SCLT1-205ENST00000503401 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
SCLT1-205ENST00000503401 CABP2Q9NPB3 220 aa23.27■■□□□ 1.32
SCLT1-205ENST00000503401 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.31
SCLT1-205ENST00000503401 NHSL1Q5SYE7 1610 aa23.26■■□□□ 1.31
SCLT1-205ENST00000503401 SRPK2P78362 688 aaKnown RBP23.26■■□□□ 1.31
SCLT1-205ENST00000503401 ATP7BP35670 1465 aa23.26■■□□□ 1.31
SCLT1-205ENST00000503401 NUDT16Q96DE0 195 aaKnown RBP23.25■■□□□ 1.31
SCLT1-205ENST00000503401 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
SCLT1-205ENST00000503401 EVC2Q86UK5 1308 aa23.24■■□□□ 1.31
SCLT1-205ENST00000503401 SBNO2Q9Y2G9 1366 aa23.24■■□□□ 1.31
SCLT1-205ENST00000503401 PMFBP1Q8TBY8 1022 aa23.23■■□□□ 1.31
SCLT1-205ENST00000503401 TESK2Q96S53 571 aa23.23■■□□□ 1.31
SCLT1-205ENST00000503401 PHF8Q9UPP1 1060 aa23.23■■□□□ 1.31
SCLT1-205ENST00000503401 FOXO3O43524 673 aa23.22■■□□□ 1.31
SCLT1-205ENST00000503401 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
SCLT1-205ENST00000503401 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
SCLT1-205ENST00000503401 ITSN1Q15811 1721 aa23.22■■□□□ 1.31
SCLT1-205ENST00000503401 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
SCLT1-205ENST00000503401 TOPAZ1Q8N9V7 1692 aa23.2■■□□□ 1.3
SCLT1-205ENST00000503401 HSPA5P11021 654 aaKnown RBP23.18■■□□□ 1.3
SCLT1-205ENST00000503401 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
SCLT1-205ENST00000503401 CCDC61Q9Y6R9 512 aa23.18■■□□□ 1.3
SCLT1-205ENST00000503401 NPHP3Q7Z494 1330 aa23.17■■□□□ 1.3
SCLT1-205ENST00000503401 PPIP5K1Q6PFW1 1433 aa23.16■■□□□ 1.3
SCLT1-205ENST00000503401 DISP3Q9P2K9 1392 aa23.15■■□□□ 1.3
SCLT1-205ENST00000503401 SOS2Q07890 1332 aaPredicted RBP23.15■■□□□ 1.3
SCLT1-205ENST00000503401 PXDNQ92626 1479 aa23.15■■□□□ 1.3
SCLT1-205ENST00000503401 NGDNQ8NEJ9 315 aaKnown RBP23.14■■□□□ 1.29
SCLT1-205ENST00000503401 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
SCLT1-205ENST00000503401 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
SCLT1-205ENST00000503401 TMF1P82094 1093 aa23.11■■□□□ 1.29
SCLT1-205ENST00000503401 PSME1Q06323 249 aa23.11■■□□□ 1.29
SCLT1-205ENST00000503401 ACEP12821 1306 aa23.11■■□□□ 1.29
SCLT1-205ENST00000503401 ATAD2Q6PL18 1390 aa23.11■■□□□ 1.29
SCLT1-205ENST00000503401 PLEKHG3A1L390 1219 aa23.1■■□□□ 1.29
SCLT1-205ENST00000503401 LRRC59Q96AG4 307 aaKnown RBP23.1■■□□□ 1.29
SCLT1-205ENST00000503401 JCADQ9P266 1359 aa23.09■■□□□ 1.29
SCLT1-205ENST00000503401 POLR3AO14802 1390 aaPredicted RBP23.08■■□□□ 1.28
SCLT1-205ENST00000503401 SLC24A1O60721 1099 aa23.08■■□□□ 1.28
SCLT1-205ENST00000503401 TMC1Q8TDI8 760 aa23.08■■□□□ 1.28
SCLT1-205ENST00000503401 SHPRHQ149N8 1683 aa23.07■■□□□ 1.28
SCLT1-205ENST00000503401 TRPM3Q9HCF6 1732 aaPredicted RBP23.06■■□□□ 1.28
SCLT1-205ENST00000503401 SLC12A5Q9H2X9 1139 aa23.05■■□□□ 1.28
SCLT1-205ENST00000503401 PNPLA6Q8IY17 1366 aa23.04■■□□□ 1.28
SCLT1-205ENST00000503401 SPATA31A3Q5VYP0 1347 aa23.04■■□□□ 1.28
SCLT1-205ENST00000503401 AKAP12Q02952 1782 aa23.03■■□□□ 1.28
SCLT1-205ENST00000503401 PAK3O75914 559 aaPredicted RBP23.03■■□□□ 1.28
SCLT1-205ENST00000503401 LMOD2Q6P5Q4 547 aa23.03■■□□□ 1.28
SCLT1-205ENST00000503401 PUS7Q96PZ0 661 aaKnown RBP23.03■■□□□ 1.28
SCLT1-205ENST00000503401 POLR3GLQ9BT43 218 aa23.02■■□□□ 1.28
SCLT1-205ENST00000503401 SBNO1A3KN83 1393 aa23.02■■□□□ 1.28
SCLT1-205ENST00000503401 TNS3Q68CZ2 1445 aa23.02■■□□□ 1.28
SCLT1-205ENST00000503401 PLEKHG5O94827 1062 aa23.01■■□□□ 1.27
SCLT1-205ENST00000503401 CDCA8Q53HL2 280 aa23■■□□□ 1.27
SCLT1-205ENST00000503401 CD163L1Q9NR16 1453 aa23■■□□□ 1.27
SCLT1-205ENST00000503401 C11orf95C9JLR9 678 aaPredicted RBP23■■□□□ 1.27
SCLT1-205ENST00000503401 ALS2Q96Q42 1657 aa22.99■■□□□ 1.27
SCLT1-205ENST00000503401 NUTM2BA6NNL0 878 aaPredicted RBP22.99■■□□□ 1.27
SCLT1-205ENST00000503401 NUTM2EB1AL46 878 aaPredicted RBP22.99■■□□□ 1.27
SCLT1-205ENST00000503401 NUTM2AQ8IVF1 878 aaPredicted RBP22.99■■□□□ 1.27
SCLT1-205ENST00000503401 USP6P35125 1406 aa22.98■■□□□ 1.27
SCLT1-205ENST00000503401 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
SCLT1-205ENST00000503401 CPSF1Q10570 1443 aaKnown RBP22.98■■□□□ 1.27
SCLT1-205ENST00000503401 MYOM1P52179 1685 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms