RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NBPF1Q3BBV0 1214 aa21.02■□□□□ 0.96
HMGXB3-201ENST00000502717 C20orf194Q5TEA3 1177 aa21.02■□□□□ 0.96
HMGXB3-201ENST00000502717 EVC2Q86UK5 1308 aa21.02■□□□□ 0.96
HMGXB3-201ENST00000502717 GPATCH3Q96I76 525 aa21.01■□□□□ 0.95
HMGXB3-201ENST00000502717 RABEP1Q15276 862 aa21.01■□□□□ 0.95
HMGXB3-201ENST00000502717 ZSCAN30Q86W11 494 aa21.01■□□□□ 0.95
HMGXB3-201ENST00000502717 NGDNQ8NEJ9 315 aaKnown RBP21.01■□□□□ 0.95
HMGXB3-201ENST00000502717 MAGI1Q96QZ7 1491 aaPredicted RBP21.01■□□□□ 0.95
HMGXB3-201ENST00000502717 RILPL2Q969X0 211 aa21■□□□□ 0.95
HMGXB3-201ENST00000502717 GRIN2AQ12879 1464 aa21■□□□□ 0.95
HMGXB3-201ENST00000502717 GOLGA6L19H0YKK7 550 aa20.98■□□□□ 0.95
HMGXB3-201ENST00000502717 K7ELQ4 463 aaPredicted RBP20.98■□□□□ 0.95
HMGXB3-201ENST00000502717 TPM3P06753 285 aa20.98■□□□□ 0.95
HMGXB3-201ENST00000502717 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
HMGXB3-201ENST00000502717 RNF214Q8ND24 703 aa20.97■□□□□ 0.95
HMGXB3-201ENST00000502717 PTPN23Q9H3S7 1636 aa20.97■□□□□ 0.95
HMGXB3-201ENST00000502717 DIAPH1O60610 1272 aaKnown RBP20.97■□□□□ 0.95
HMGXB3-201ENST00000502717 CT47B1P0C2W7 299 aaPredicted RBP20.97■□□□□ 0.95
HMGXB3-201ENST00000502717 WDR63Q8IWG1 891 aa20.97■□□□□ 0.95
HMGXB3-201ENST00000502717 PRPF40AO75400 957 aaKnown RBP20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 CWC22Q9HCG8 908 aaKnown RBP20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 ERBINQ96RT1 1412 aa20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 SCAPERQ9BY12 1400 aa20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 RPRD2Q5VT52 1461 aaKnown RBP20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 MVPQ14764 893 aaKnown RBP20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 GCC1Q96CN9 775 aa20.96■□□□□ 0.95
HMGXB3-201ENST00000502717 PDCL3Q9H2J4 239 aa20.95■□□□□ 0.94
HMGXB3-201ENST00000502717 TAOK2Q9UL54 1235 aa20.95■□□□□ 0.94
HMGXB3-201ENST00000502717 TBC1D2Q9BYX2 928 aa20.94■□□□□ 0.94
HMGXB3-201ENST00000502717 TSPY26PQ9H489 355 aa20.94■□□□□ 0.94
HMGXB3-201ENST00000502717 KIF3AQ9Y496 699 aa20.94■□□□□ 0.94
HMGXB3-201ENST00000502717 UQCRHLA0A096LP55 91 aa20.93■□□□□ 0.94
HMGXB3-201ENST00000502717 BECN2A8MW95 431 aa20.93■□□□□ 0.94
HMGXB3-201ENST00000502717 UQCRHP07919 91 aa20.93■□□□□ 0.94
HMGXB3-201ENST00000502717 LETM1O95202 739 aaPredicted RBP20.93■□□□□ 0.94
HMGXB3-201ENST00000502717 CLCN1P35523 988 aa20.93■□□□□ 0.94
HMGXB3-201ENST00000502717 MEX3CQ5U5Q3 659 aaKnown RBP20.93■□□□□ 0.94
HMGXB3-201ENST00000502717 MCM2P49736 904 aa20.92■□□□□ 0.94
HMGXB3-201ENST00000502717 ZNF592Q92610 1267 aa20.92■□□□□ 0.94
HMGXB3-201ENST00000502717 ANO2Q9NQ90 1003 aa20.92■□□□□ 0.94
HMGXB3-201ENST00000502717 GNAI1P63096 354 aa20.92■□□□□ 0.94
HMGXB3-201ENST00000502717 GNL2Q13823 731 aaKnown RBP20.92■□□□□ 0.94
HMGXB3-201ENST00000502717 MTHFSP49914 203 aa20.91■□□□□ 0.94
HMGXB3-201ENST00000502717 PLB1Q6P1J6 1458 aa20.9■□□□□ 0.94
HMGXB3-201ENST00000502717 HSP90B1P14625 803 aaKnown RBP20.9■□□□□ 0.94
HMGXB3-201ENST00000502717 EXOSC9Q06265 439 aaKnown RBP20.9■□□□□ 0.94
HMGXB3-201ENST00000502717 GOLGA6L1Q8N7Z2 621 aa20.9■□□□□ 0.94
HMGXB3-201ENST00000502717 LRPPRCP42704 1394 aaKnown RBP20.89■□□□□ 0.93
HMGXB3-201ENST00000502717 DUSP27Q5VZP5 1158 aa20.89■□□□□ 0.93
HMGXB3-201ENST00000502717 ZNF608Q9ULD9 1512 aaPredicted RBP20.89■□□□□ 0.93
HMGXB3-201ENST00000502717 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.93
HMGXB3-201ENST00000502717 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.88■□□□□ 0.93
HMGXB3-201ENST00000502717 SMC3Q9UQE7 1217 aa20.88■□□□□ 0.93
HMGXB3-201ENST00000502717 ABCC5O15440 1437 aa20.88■□□□□ 0.93
HMGXB3-201ENST00000502717 RUFY2Q8WXA3 655 aa20.87■□□□□ 0.93
HMGXB3-201ENST00000502717 IFT57Q9NWB7 429 aa20.87■□□□□ 0.93
HMGXB3-201ENST00000502717 TEX35Q5T0J7 233 aa20.87■□□□□ 0.93
HMGXB3-201ENST00000502717 ATF7IPQ6VMQ6 1270 aa20.87■□□□□ 0.93
HMGXB3-201ENST00000502717 WWC1Q8IX03 1113 aa20.86■□□□□ 0.93
HMGXB3-201ENST00000502717 ZMYND15Q9H091 742 aa20.86■□□□□ 0.93
HMGXB3-201ENST00000502717 H3BQV1 296 aa20.85■□□□□ 0.93
HMGXB3-201ENST00000502717 IFFO2Q5TF58 517 aa20.85■□□□□ 0.93
HMGXB3-201ENST00000502717 CHD1LQ86WJ1 897 aa20.85■□□□□ 0.93
HMGXB3-201ENST00000502717 CAMSAP2Q08AD1 1489 aa20.85■□□□□ 0.93
HMGXB3-201ENST00000502717 NOB1Q9ULX3 412 aaKnown RBP20.85■□□□□ 0.93
HMGXB3-201ENST00000502717 ZNF330Q9Y3S2 320 aaPredicted RBP20.85■□□□□ 0.93
HMGXB3-201ENST00000502717 DCAF8L1A6NGE4 600 aa20.84■□□□□ 0.93
HMGXB3-201ENST00000502717 ZKSCAN1P17029 563 aaPredicted RBP20.84■□□□□ 0.93
HMGXB3-201ENST00000502717 TBC1D32Q96NH3 1257 aa20.84■□□□□ 0.93
HMGXB3-201ENST00000502717 ARHGEF11O15085 1522 aa20.84■□□□□ 0.93
HMGXB3-201ENST00000502717 NEK4P51957 841 aa20.84■□□□□ 0.93
HMGXB3-201ENST00000502717 XRCC6P12956 609 aaKnown RBP eCLIP20.83■□□□□ 0.938e-6■■□□□ 12.6
HMGXB3-201ENST00000502717 C8orf34Q49A92 452 aa20.83■□□□□ 0.93
HMGXB3-201ENST00000502717 CCDC141Q6ZP82 1450 aa20.83■□□□□ 0.93
HMGXB3-201ENST00000502717 MINK1Q8N4C8 1332 aaPredicted RBP20.83■□□□□ 0.93
HMGXB3-201ENST00000502717 CCDC66A2RUB6 948 aa20.83■□□□□ 0.93
HMGXB3-201ENST00000502717 SF3A1Q15459 793 aaKnown RBP20.83■□□□□ 0.92
HMGXB3-201ENST00000502717 THOC2Q8NI27 1593 aaKnown RBP20.83■□□□□ 0.92
HMGXB3-201ENST00000502717 CHMP4CQ96CF2 233 aa20.83■□□□□ 0.92
HMGXB3-201ENST00000502717 GPS2Q13227 327 aa20.82■□□□□ 0.92
HMGXB3-201ENST00000502717 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
HMGXB3-201ENST00000502717 A0A0U1RQG5 324 aaPredicted RBP20.82■□□□□ 0.92
HMGXB3-201ENST00000502717 SASS6Q6UVJ0 657 aa20.82■□□□□ 0.92
HMGXB3-201ENST00000502717 CCDC34Q96HJ3 373 aa20.82■□□□□ 0.92
HMGXB3-201ENST00000502717 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
HMGXB3-201ENST00000502717 FAM184AQ8NB25 1140 aa20.81■□□□□ 0.92
HMGXB3-201ENST00000502717 EVA1CP58658 441 aa20.81■□□□□ 0.92
HMGXB3-201ENST00000502717 RNF123Q5XPI4 1314 aa20.81■□□□□ 0.92
HMGXB3-201ENST00000502717 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.8■□□□□ 0.92
HMGXB3-201ENST00000502717 VPS37CA5D8V6 355 aaPredicted RBP20.8■□□□□ 0.92
HMGXB3-201ENST00000502717 TSR2Q969E8 191 aaKnown RBP20.8■□□□□ 0.92
HMGXB3-201ENST00000502717 RARSP54136 660 aaKnown RBP20.8■□□□□ 0.92
HMGXB3-201ENST00000502717 TNPO1Q92973 898 aaKnown RBP20.8■□□□□ 0.92
HMGXB3-201ENST00000502717 CFAP70Q5T0N1 1121 aa20.79■□□□□ 0.92
HMGXB3-201ENST00000502717 BICD2Q8TD16 824 aa20.79■□□□□ 0.92
HMGXB3-201ENST00000502717 CHMP3Q9Y3E7 222 aa20.79■□□□□ 0.92
HMGXB3-201ENST00000502717 ARGLU1Q9NWB6 273 aaPredicted RBP20.78■□□□□ 0.92
HMGXB3-201ENST00000502717 KIF14Q15058 1648 aa20.78■□□□□ 0.92
HMGXB3-201ENST00000502717 AMPHP49418 695 aa20.78■□□□□ 0.92
HMGXB3-201ENST00000502717 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms