RNA–Protein interactions for RNA: ENST00000498402.2

LRRC41-205, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 2,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-205ENST00000498402 PTPRMP28827 1452 aa23.12■■□□□ 1.29
LRRC41-205ENST00000498402 CGNL1Q0VF96 1302 aa23.12■■□□□ 1.29
LRRC41-205ENST00000498402 FANCIQ9NVI1 1328 aa23.12■■□□□ 1.29
LRRC41-205ENST00000498402 STK26Q9P289 416 aa23.12■■□□□ 1.29
LRRC41-205ENST00000498402 SHPRHQ149N8 1683 aa23.11■■□□□ 1.29
LRRC41-205ENST00000498402 APAF1O14727 1248 aa23.11■■□□□ 1.29
LRRC41-205ENST00000498402 CABP2Q9NPB3 220 aa23.1■■□□□ 1.29
LRRC41-205ENST00000498402 ALKQ9UM73 1620 aa23.1■■□□□ 1.29
LRRC41-205ENST00000498402 PLIN1O60240 522 aa23.1■■□□□ 1.29
LRRC41-205ENST00000498402 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
LRRC41-205ENST00000498402 YTHDC2Q9H6S0 1430 aaKnown RBP23.1■■□□□ 1.29
LRRC41-205ENST00000498402 SPATA31D1Q6ZQQ2 1576 aa23.1■■□□□ 1.29
LRRC41-205ENST00000498402 SAFB2Q14151 953 aaKnown RBP eCLIP23.09■■□□□ 1.297e-7■□□□□ 9.1
LRRC41-205ENST00000498402 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
LRRC41-205ENST00000498402 TRMT2AQ8IZ69 625 aaKnown RBP23.09■■□□□ 1.29
LRRC41-205ENST00000498402 NGEFQ8N5V2 710 aa23.09■■□□□ 1.29
LRRC41-205ENST00000498402 KIF13AQ9H1H9 1805 aa23.08■■□□□ 1.29
LRRC41-205ENST00000498402 NSD2O96028 1365 aa23.08■■□□□ 1.28
LRRC41-205ENST00000498402 NINLQ9Y2I6 1382 aa23.08■■□□□ 1.28
LRRC41-205ENST00000498402 STAG3Q9UJ98 1225 aa23.07■■□□□ 1.28
LRRC41-205ENST00000498402 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
LRRC41-205ENST00000498402 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
LRRC41-205ENST00000498402 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
LRRC41-205ENST00000498402 PRAM1Q96QH2 718 aa23.04■■□□□ 1.28
LRRC41-205ENST00000498402 SRPK2P78362 688 aaKnown RBP23.03■■□□□ 1.28
LRRC41-205ENST00000498402 CRBNQ96SW2 442 aa23.03■■□□□ 1.28
LRRC41-205ENST00000498402 POGKQ9P215 609 aa23.02■■□□□ 1.28
LRRC41-205ENST00000498402 A0A1W2PP64 1363 aa23.02■■□□□ 1.28
LRRC41-205ENST00000498402 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
LRRC41-205ENST00000498402 MTHFSP49914 203 aa23.02■■□□□ 1.28
LRRC41-205ENST00000498402 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
LRRC41-205ENST00000498402 MINK1Q8N4C8 1332 aaPredicted RBP23.01■■□□□ 1.27
LRRC41-205ENST00000498402 MLECQ14165 292 aa23.01■■□□□ 1.27
LRRC41-205ENST00000498402 ABCC11Q96J66 1382 aa23■■□□□ 1.27
LRRC41-205ENST00000498402 E9PSI1 815 aa23■■□□□ 1.27
LRRC41-205ENST00000498402 NKTRP30414 1462 aaKnown RBP23■■□□□ 1.27
LRRC41-205ENST00000498402 RIMS2Q9UQ26 1411 aa23■■□□□ 1.27
LRRC41-205ENST00000498402 MYT1Q01538 1121 aa22.99■■□□□ 1.27
LRRC41-205ENST00000498402 ANP32EQ9BTT0 268 aa22.99■■□□□ 1.27
LRRC41-205ENST00000498402 MSH5O43196 834 aa22.99■■□□□ 1.27
LRRC41-205ENST00000498402 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
LRRC41-205ENST00000498402 C20orf194Q5TEA3 1177 aa22.98■■□□□ 1.27
LRRC41-205ENST00000498402 SETD1AO15047 1707 aaKnown RBP22.98■■□□□ 1.27
LRRC41-205ENST00000498402 RUNDC1Q96C34 613 aa22.97■■□□□ 1.27
LRRC41-205ENST00000498402 DLC1Q96QB1 1528 aa22.97■■□□□ 1.27
LRRC41-205ENST00000498402 IQSEC2Q5JU85 1478 aa22.97■■□□□ 1.27
LRRC41-205ENST00000498402 DMRT2Q9Y5R5 561 aa22.96■■□□□ 1.27
LRRC41-205ENST00000498402 CD163L1Q9NR16 1453 aa22.96■■□□□ 1.27
LRRC41-205ENST00000498402 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
LRRC41-205ENST00000498402 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.96■■□□□ 1.27
LRRC41-205ENST00000498402 TERF2IPQ9NYB0 399 aa22.95■■□□□ 1.26
LRRC41-205ENST00000498402 ANKRD26Q9UPS8 1709 aa22.94■■□□□ 1.26
LRRC41-205ENST00000498402 CDK19Q9BWU1 502 aa22.93■■□□□ 1.26
LRRC41-205ENST00000498402 ZMYM3Q14202 1370 aa22.92■■□□□ 1.26
LRRC41-205ENST00000498402 MED14O60244 1454 aa22.92■■□□□ 1.26
LRRC41-205ENST00000498402 TCP11L2Q8N4U5 519 aa22.91■■□□□ 1.26
LRRC41-205ENST00000498402 NRXN3Q9Y4C0 1643 aa22.91■■□□□ 1.26
LRRC41-205ENST00000498402 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
LRRC41-205ENST00000498402 PHF23Q9BUL5 403 aaPredicted RBP22.9■■□□□ 1.26
LRRC41-205ENST00000498402 NLRP1Q9C000 1473 aa22.9■■□□□ 1.26
LRRC41-205ENST00000498402 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.26
LRRC41-205ENST00000498402 ESF1Q9H501 851 aaKnown RBP22.89■■□□□ 1.26
LRRC41-205ENST00000498402 FYB1O15117 783 aa22.89■■□□□ 1.25
LRRC41-205ENST00000498402 HDGFL2Q7Z4V5 671 aaPredicted RBP22.88■■□□□ 1.25
LRRC41-205ENST00000498402 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.88■■□□□ 1.25
LRRC41-205ENST00000498402 RRP7AQ9Y3A4 280 aaKnown RBP22.88■■□□□ 1.25
LRRC41-205ENST00000498402 NEUROD2Q15784 382 aa22.86■■□□□ 1.25
LRRC41-205ENST00000498402 CCDC27Q2M243 656 aa22.86■■□□□ 1.25
LRRC41-205ENST00000498402 NCBP3Q53F19 620 aaKnown RBP22.86■■□□□ 1.25
LRRC41-205ENST00000498402 WAPLQ7Z5K2 1190 aa22.86■■□□□ 1.25
LRRC41-205ENST00000498402 CABP1Q9NZU7 370 aa22.86■■□□□ 1.25
LRRC41-205ENST00000498402 KIF20BQ96Q89 1820 aa22.85■■□□□ 1.25
LRRC41-205ENST00000498402 BCAR3O75815 825 aa22.85■■□□□ 1.25
LRRC41-205ENST00000498402 U2AF1L5P0DN76 240 aaPredicted RBP22.85■■□□□ 1.25
LRRC41-205ENST00000498402 U2AF1Q01081 240 aaKnown RBP eCLIP22.85■■□□□ 1.25
LRRC41-205ENST00000498402 WDR63Q8IWG1 891 aa22.85■■□□□ 1.25
LRRC41-205ENST00000498402 COL3A1P02461 1466 aaPredicted RBP22.85■■□□□ 1.25
LRRC41-205ENST00000498402 ADGRB2O60241 1585 aa22.84■■□□□ 1.25
LRRC41-205ENST00000498402 KDM2BQ8NHM5 1336 aa22.83■■□□□ 1.25
LRRC41-205ENST00000498402 MS4A1P11836 297 aa22.83■■□□□ 1.24
LRRC41-205ENST00000498402 METP08581 1390 aa22.82■■□□□ 1.24
LRRC41-205ENST00000498402 TNRQ92752 1358 aa22.82■■□□□ 1.24
LRRC41-205ENST00000498402 ATP7BP35670 1465 aa22.82■■□□□ 1.24
LRRC41-205ENST00000498402 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
LRRC41-205ENST00000498402 HDGFP51858 240 aaKnown RBP22.8■■□□□ 1.24
LRRC41-205ENST00000498402 CENPQQ7L2Z9 268 aaPredicted RBP22.78■■□□□ 1.24
LRRC41-205ENST00000498402 UBR1Q8IWV7 1749 aa22.78■■□□□ 1.24
LRRC41-205ENST00000498402 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
LRRC41-205ENST00000498402 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
LRRC41-205ENST00000498402 TECPR2O15040 1411 aa22.76■■□□□ 1.23
LRRC41-205ENST00000498402 WASLO00401 505 aaPredicted RBP22.76■■□□□ 1.23
LRRC41-205ENST00000498402 U2SURPO15042 1029 aaKnown RBP22.76■■□□□ 1.23
LRRC41-205ENST00000498402 PDE3AQ14432 1141 aa22.76■■□□□ 1.23
LRRC41-205ENST00000498402 SIRT1Q96EB6 747 aa22.76■■□□□ 1.23
LRRC41-205ENST00000498402 FAM135BQ49AJ0 1406 aa22.76■■□□□ 1.23
LRRC41-205ENST00000498402 PDE4AP27815 886 aa22.75■■□□□ 1.23
LRRC41-205ENST00000498402 TMEM2Q9UHN6 1383 aa22.75■■□□□ 1.23
LRRC41-205ENST00000498402 TXNDC2Q86VQ3 553 aa22.74■■□□□ 1.23
LRRC41-205ENST00000498402 CPS1P31327 1500 aa22.74■■□□□ 1.23
LRRC41-205ENST00000498402 RARSP54136 660 aaKnown RBP22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms