RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 POLR3EQ9NVU0 708 aa4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 ACIN1Q9UKV3 1341 aaKnown RBP4.08□□□□□ -1.76
CKS1BP2-201ENST00000497342 RAD54L2Q9Y4B4 1467 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 SENP3-EIF4A1A0A087X0R7 540 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 MAP3K7O43318 606 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 WASHC4Q2M389 1173 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 TSR1Q2NL82 804 aaKnown RBP4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 AEBP1Q8IUX7 1158 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 ADAMTS19Q8TE59 1207 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 CALR3Q96L12 384 aaKnown RBP4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 EYA1Q99502 592 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 GDPD2Q9HCC8 539 aa4.07□□□□□ -1.76
CKS1BP2-201ENST00000497342 POLA1P09884 1462 aaPredicted RBP4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 NUP160Q12769 1436 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 TMEM88BA6NKF7 163 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 POM121CA8CG34 1229 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 ATG7O95352 703 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 C6orf132Q5T0Z8 1188 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 PADI6Q6TGC4 694 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 ALG2Q9H553 416 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 BCORL1Q5H9F3 1711 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 WDR97A6NE52 1622 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 DNMBPQ6XZF7 1577 aa4.06□□□□□ -1.76
CKS1BP2-201ENST00000497342 PLB1Q6P1J6 1458 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SOGA1O94964 1423 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 ASXL2Q76L83 1435 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 G3V3G9 751 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 TOM1O60784 492 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 YY1P25490 414 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SOX11P35716 441 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 PRSS12P56730 875 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 ELOAQ14241 798 aaKnown RBP4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SND1Q7KZF4 910 aaKnown RBP eCLIP4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 SULF1Q8IWU6 871 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 RBM46Q8TBY0 533 aaKnown RBP4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 TBC1D2BQ9UPU7 963 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 NDUFB9Q9Y6M9 179 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 KIAA0586Q9BVV6 1533 aa4.05□□□□□ -1.76
CKS1BP2-201ENST00000497342 MAP3K4Q9Y6R4 1608 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 USP17L8P0C7I0 530 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 PLCG2P16885 1265 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 ZNF710Q8N1W2 664 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 PPP1R12CQ9BZL4 782 aa4.04□□□□□ -1.76
CKS1BP2-201ENST00000497342 RIMS1Q86UR5 1692 aaKnown RBP4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 CFAP43Q8NDM7 1665 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 ARID4BQ4LE39 1312 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 ZNF335Q9H4Z2 1342 aaPredicted RBP4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 SETBP1Q9Y6X0 1596 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 LOC105371045A0A1W2PR82 267 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 USP46P62068 366 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 QPCTQ16769 361 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 TRIM34Q9BYJ4 488 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 PCDHGA4Q9Y5G9 962 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 GRIN2AQ12879 1464 aa4.03□□□□□ -1.76
CKS1BP2-201ENST00000497342 EPRSP07814 1512 aaKnown RBP4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 RBM47A0AV96 593 aaKnown RBP4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 POTEFA5A3E0 1075 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 E9PSI1 815 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 IGSF3O75054 1194 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 ERCC3P19447 782 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZDHHC16Q969W1 377 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 CDCA7LQ96GN5 454 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 TMEM134Q9H6X4 195 aa4.02□□□□□ -1.77
CKS1BP2-201ENST00000497342 RCCD1A6NED2 376 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 MOXD2PA6NHM9 499 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 CSB-PGBD3P0DP91 1061 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 DNAJB2P25686 324 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 CCDC27Q2M243 656 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 FAM161AQ3B820 660 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 RTL5Q5HYW3 569 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 HDGFL1Q5TGJ6 251 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 UCN2Q96RP3 112 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 FAM198AQ9UFP1 575 aa4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 COLQQ9Y215 455 aaPredicted RBP4.01□□□□□ -1.77
CKS1BP2-201ENST00000497342 PALM3A6NDB9 673 aaPredicted RBP4□□□□□ -1.77
CKS1BP2-201ENST00000497342 ABL2P42684 1182 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 FOXD4L5Q5VV16 416 aaPredicted RBP4□□□□□ -1.77
CKS1BP2-201ENST00000497342 B4GALNT3Q6L9W6 998 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 TXNDC2Q86VQ3 553 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 NFATC2IPQ8NCF5 419 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 NLRP7Q8WX94 980 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 FOXD4L4Q8WXT5 416 aaPredicted RBP4□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZBTB3Q9H5J0 574 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 VRTNQ9H8Y1 702 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZSWIM6Q9HCJ5 1215 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 PCDHB15Q9Y5E8 787 aa4□□□□□ -1.77
CKS1BP2-201ENST00000497342 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 HOXA2O43364 376 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 ZNF428Q96B54 188 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 ADAM33Q9BZ11 813 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 BCL2L12Q9HB09 334 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 MAFBQ9Y5Q3 323 aaPredicted RBP3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 PREX1Q8TCU6 1659 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 ABCC2Q92887 1545 aa3.99□□□□□ -1.77
CKS1BP2-201ENST00000497342 PPP1R3GB7ZBB8 358 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 AP1G2O75843 785 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 C7P10643 843 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 GCGRP47871 477 aa3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 RBM25P49756 843 aaKnown RBP3.98□□□□□ -1.77
CKS1BP2-201ENST00000497342 C1QTNF8P60827 252 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms