RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 FMN2Q9NZ56 1722 aa17.92■□□□□ 0.46
HDLBP-246ENST00000496569 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
HDLBP-246ENST00000496569 JCADQ9P266 1359 aa17.91■□□□□ 0.46
HDLBP-246ENST00000496569 C14orf93Q9H972 538 aaKnown RBP17.91■□□□□ 0.46
HDLBP-246ENST00000496569 NUTM2FA1L443 756 aa17.9■□□□□ 0.46
HDLBP-246ENST00000496569 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
HDLBP-246ENST00000496569 ORAI2Q96SN7 254 aa17.9■□□□□ 0.46
HDLBP-246ENST00000496569 RGS17Q9UGC6 210 aaPredicted RBP17.9■□□□□ 0.46
HDLBP-246ENST00000496569 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
HDLBP-246ENST00000496569 ABCC11Q96J66 1382 aa17.9■□□□□ 0.46
HDLBP-246ENST00000496569 SAFB2Q14151 953 aaKnown RBP eCLIP17.87■□□□□ 0.45
HDLBP-246ENST00000496569 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
HDLBP-246ENST00000496569 NUTM2BA6NNL0 878 aaPredicted RBP17.83■□□□□ 0.44
HDLBP-246ENST00000496569 NUTM2EB1AL46 878 aaPredicted RBP17.83■□□□□ 0.44
HDLBP-246ENST00000496569 NUTM2AQ8IVF1 878 aaPredicted RBP17.83■□□□□ 0.44
HDLBP-246ENST00000496569 PRAM1Q96QH2 718 aa17.83■□□□□ 0.44
HDLBP-246ENST00000496569 DLC1Q96QB1 1528 aa17.82■□□□□ 0.44
HDLBP-246ENST00000496569 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
HDLBP-246ENST00000496569 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
HDLBP-246ENST00000496569 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
HDLBP-246ENST00000496569 ESCO1Q5FWF5 840 aa17.81■□□□□ 0.44
HDLBP-246ENST00000496569 POTEAQ6S8J7 498 aa17.81■□□□□ 0.44
HDLBP-246ENST00000496569 PNPLA6Q8IY17 1366 aa17.8■□□□□ 0.44
HDLBP-246ENST00000496569 SIN3AQ96ST3 1273 aa17.8■□□□□ 0.44
HDLBP-246ENST00000496569 SPATA31A6Q5VVP1 1343 aa17.79■□□□□ 0.44
HDLBP-246ENST00000496569 KIAA1210Q9ULL0 1709 aa17.79■□□□□ 0.44
HDLBP-246ENST00000496569 KIF1AQ12756 1690 aa17.79■□□□□ 0.44
HDLBP-246ENST00000496569 ADGRB2O60241 1585 aa17.79■□□□□ 0.44
HDLBP-246ENST00000496569 PXDNQ92626 1479 aa17.78■□□□□ 0.44
HDLBP-246ENST00000496569 MEX3CQ5U5Q3 659 aaKnown RBP17.78■□□□□ 0.44
HDLBP-246ENST00000496569 HIRIP3Q9BW71 556 aaPredicted RBP17.78■□□□□ 0.44
HDLBP-246ENST00000496569 POGKQ9P215 609 aa17.77■□□□□ 0.44
HDLBP-246ENST00000496569 SOS2Q07890 1332 aaPredicted RBP17.76■□□□□ 0.43
HDLBP-246ENST00000496569 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
HDLBP-246ENST00000496569 MINK1Q8N4C8 1332 aaPredicted RBP17.75■□□□□ 0.43
HDLBP-246ENST00000496569 FOXO3O43524 673 aa17.75■□□□□ 0.43
HDLBP-246ENST00000496569 SIRT1Q96EB6 747 aa17.75■□□□□ 0.43
HDLBP-246ENST00000496569 COL22A1Q8NFW1 1626 aaPredicted RBP17.75■□□□□ 0.43
HDLBP-246ENST00000496569 NEUROD1Q13562 356 aa17.74■□□□□ 0.43
HDLBP-246ENST00000496569 NBPF1Q3BBV0 1214 aa17.73■□□□□ 0.43
HDLBP-246ENST00000496569 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
HDLBP-246ENST00000496569 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
HDLBP-246ENST00000496569 NPHP3Q7Z494 1330 aa17.72■□□□□ 0.43
HDLBP-246ENST00000496569 L3MBTL2Q969R5 705 aa17.71■□□□□ 0.43
HDLBP-246ENST00000496569 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
HDLBP-246ENST00000496569 PRR36Q9H6K5 1346 aa17.7■□□□□ 0.42
HDLBP-246ENST00000496569 TULP4Q9NRJ4 1543 aa17.69■□□□□ 0.42
HDLBP-246ENST00000496569 QRICH2Q9H0J4 1663 aa17.69■□□□□ 0.42
HDLBP-246ENST00000496569 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
HDLBP-246ENST00000496569 ABCA3Q99758 1704 aa17.69■□□□□ 0.42
HDLBP-246ENST00000496569 AFF2P51816 1311 aa17.69■□□□□ 0.42
HDLBP-246ENST00000496569 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
HDLBP-246ENST00000496569 PMFBP1Q8TBY8 1022 aa17.68■□□□□ 0.42
HDLBP-246ENST00000496569 C8orf37Q96NL8 207 aa17.68■□□□□ 0.42
HDLBP-246ENST00000496569 PHF8Q9UPP1 1060 aa17.68■□□□□ 0.42
HDLBP-246ENST00000496569 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
HDLBP-246ENST00000496569 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
HDLBP-246ENST00000496569 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
HDLBP-246ENST00000496569 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
HDLBP-246ENST00000496569 TOPAZ1Q8N9V7 1692 aa17.65■□□□□ 0.42
HDLBP-246ENST00000496569 KRT28Q7Z3Y7 464 aa17.65■□□□□ 0.42
HDLBP-246ENST00000496569 ATP7BP35670 1465 aa17.64■□□□□ 0.41
HDLBP-246ENST00000496569 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
HDLBP-246ENST00000496569 SPATA31A3Q5VYP0 1347 aa17.63■□□□□ 0.41
HDLBP-246ENST00000496569 TNS3Q68CZ2 1445 aa17.63■□□□□ 0.41
HDLBP-246ENST00000496569 ALS2Q96Q42 1657 aa17.62■□□□□ 0.41
HDLBP-246ENST00000496569 ZNF772Q68DY9 489 aaPredicted RBP17.62■□□□□ 0.41
HDLBP-246ENST00000496569 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
HDLBP-246ENST00000496569 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
HDLBP-246ENST00000496569 CABLES1Q8TDN4 633 aa17.6■□□□□ 0.41
HDLBP-246ENST00000496569 NGLY1Q96IV0 654 aa17.6■□□□□ 0.41
HDLBP-246ENST00000496569 CRYBG1Q9Y4K1 1723 aa17.59■□□□□ 0.41
HDLBP-246ENST00000496569 PLCH1Q4KWH8 1693 aa17.58■□□□□ 0.41
HDLBP-246ENST00000496569 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.4
HDLBP-246ENST00000496569 PSME1Q06323 249 aa17.58■□□□□ 0.4
HDLBP-246ENST00000496569 CDK19Q9BWU1 502 aa17.58■□□□□ 0.4
HDLBP-246ENST00000496569 NUDT16Q96DE0 195 aaKnown RBP17.57■□□□□ 0.4
HDLBP-246ENST00000496569 CENPJQ9HC77 1338 aaPredicted RBP17.56■□□□□ 0.4
HDLBP-246ENST00000496569 RGS12O14924 1447 aa17.55■□□□□ 0.4
HDLBP-246ENST00000496569 SBNO1A3KN83 1393 aa17.55■□□□□ 0.4
HDLBP-246ENST00000496569 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
HDLBP-246ENST00000496569 RXRBP28702 533 aa17.55■□□□□ 0.4
HDLBP-246ENST00000496569 QTRT2Q9H974 415 aaKnown RBP17.55■□□□□ 0.4
HDLBP-246ENST00000496569 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.55■□□□□ 0.4
HDLBP-246ENST00000496569 NGDNQ8NEJ9 315 aaKnown RBP17.54■□□□□ 0.4
HDLBP-246ENST00000496569 USP21Q9UK80 565 aa17.54■□□□□ 0.4
HDLBP-246ENST00000496569 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
HDLBP-246ENST00000496569 PHRF1Q9P1Y6 1649 aaKnown RBP17.53■□□□□ 0.4
HDLBP-246ENST00000496569 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
HDLBP-246ENST00000496569 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
HDLBP-246ENST00000496569 BCL9LQ86UU0 1499 aa17.52■□□□□ 0.4
HDLBP-246ENST00000496569 HAP1P54257 671 aaPredicted RBP17.52■□□□□ 0.4
HDLBP-246ENST00000496569 ATRNO75882 1429 aa17.52■□□□□ 0.4
HDLBP-246ENST00000496569 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
HDLBP-246ENST00000496569 ARHGEF10O15013 1369 aa17.51■□□□□ 0.39
HDLBP-246ENST00000496569 NRAPQ86VF7 1730 aa17.5■□□□□ 0.39
HDLBP-246ENST00000496569 PAK3O75914 559 aaPredicted RBP17.5■□□□□ 0.39
HDLBP-246ENST00000496569 SRPK2P78362 688 aaKnown RBP17.5■□□□□ 0.39
HDLBP-246ENST00000496569 SLIT2O94813 1529 aa17.5■□□□□ 0.39
HDLBP-246ENST00000496569 RALGAPBQ86X10 1494 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms