RNA–Protein interactions for RNA: ENST00000496465.1

TM2D1-211, Transcript of TM2 domain containing 1, humanhuman

TSL 2

Gene TM2D1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D1-211ENST00000496465 YTHDC2Q9H6S0 1430 aaKnown RBP26.84■■□□□ 1.89
TM2D1-211ENST00000496465 DDX17Q92841 729 aaKnown RBP26.84■■□□□ 1.89
TM2D1-211ENST00000496465 ORAI2Q96SN7 254 aa26.83■■□□□ 1.89
TM2D1-211ENST00000496465 WAPLQ7Z5K2 1190 aa26.82■■□□□ 1.88
TM2D1-211ENST00000496465 MEX3CQ5U5Q3 659 aaKnown RBP26.8■■□□□ 1.88
TM2D1-211ENST00000496465 SIRT1Q96EB6 747 aa26.8■■□□□ 1.88
TM2D1-211ENST00000496465 PNPLA6Q8IY17 1366 aa26.79■■□□□ 1.88
TM2D1-211ENST00000496465 CFAP70Q5T0N1 1121 aa26.78■■□□□ 1.88
TM2D1-211ENST00000496465 SOS2Q07890 1332 aaPredicted RBP26.78■■□□□ 1.88
TM2D1-211ENST00000496465 PLEKHH1Q9ULM0 1364 aa26.78■■□□□ 1.88
TM2D1-211ENST00000496465 FMN2Q9NZ56 1722 aa26.76■■□□□ 1.88
TM2D1-211ENST00000496465 DHX57Q6P158 1386 aaKnown RBP26.76■■□□□ 1.87
TM2D1-211ENST00000496465 NUTM2BA6NNL0 878 aaPredicted RBP26.76■■□□□ 1.87
TM2D1-211ENST00000496465 NUTM2EB1AL46 878 aaPredicted RBP26.76■■□□□ 1.87
TM2D1-211ENST00000496465 NUTM2AQ8IVF1 878 aaPredicted RBP26.76■■□□□ 1.87
TM2D1-211ENST00000496465 ZNF772Q68DY9 489 aaPredicted RBP26.75■■□□□ 1.87
TM2D1-211ENST00000496465 ESCO1Q5FWF5 840 aa26.72■■□□□ 1.87
TM2D1-211ENST00000496465 STAC3Q96MF2 364 aa26.71■■□□□ 1.87
TM2D1-211ENST00000496465 ADGRB1O14514 1584 aa26.71■■□□□ 1.87
TM2D1-211ENST00000496465 DLC1Q96QB1 1528 aa26.7■■□□□ 1.87
TM2D1-211ENST00000496465 COL22A1Q8NFW1 1626 aaPredicted RBP26.7■■□□□ 1.86
TM2D1-211ENST00000496465 NPHP3Q7Z494 1330 aa26.69■■□□□ 1.86
TM2D1-211ENST00000496465 PXDNQ92626 1479 aa26.68■■□□□ 1.86
TM2D1-211ENST00000496465 DCAF11Q8TEB1 546 aa26.68■■□□□ 1.86
TM2D1-211ENST00000496465 RGPD8O14715 1765 aaPredicted RBP26.68■■□□□ 1.86
TM2D1-211ENST00000496465 KIF1AQ12756 1690 aa26.66■■□□□ 1.86
TM2D1-211ENST00000496465 AFF2P51816 1311 aa26.65■■□□□ 1.86
TM2D1-211ENST00000496465 NUTM2FA1L443 756 aa26.65■■□□□ 1.86
TM2D1-211ENST00000496465 KDM2AQ9Y2K7 1162 aa26.65■■□□□ 1.86
TM2D1-211ENST00000496465 FOXO3O43524 673 aa26.64■■□□□ 1.86
TM2D1-211ENST00000496465 PRAM1Q96QH2 718 aa26.64■■□□□ 1.86
TM2D1-211ENST00000496465 C8orf37Q96NL8 207 aa26.61■■□□□ 1.85
TM2D1-211ENST00000496465 ADGRB2O60241 1585 aa26.61■■□□□ 1.85
TM2D1-211ENST00000496465 POGKQ9P215 609 aa26.59■■□□□ 1.85
TM2D1-211ENST00000496465 RXRBP28702 533 aa26.58■■□□□ 1.85
TM2D1-211ENST00000496465 SAFB2Q14151 953 aaKnown RBP eCLIP26.58■■□□□ 1.85
TM2D1-211ENST00000496465 MARF1Q9Y4F3 1742 aaKnown RBP26.58■■□□□ 1.85
TM2D1-211ENST00000496465 CDK12Q9NYV4 1490 aaPredicted RBP26.57■■□□□ 1.84
TM2D1-211ENST00000496465 ADAMTS2O95450 1211 aa26.57■■□□□ 1.84
TM2D1-211ENST00000496465 XPCQ01831 940 aaPredicted RBP26.57■■□□□ 1.84
TM2D1-211ENST00000496465 TRAK1Q9UPV9 953 aa26.57■■□□□ 1.84
TM2D1-211ENST00000496465 NGLY1Q96IV0 654 aa26.56■■□□□ 1.84
TM2D1-211ENST00000496465 USP32Q8NFA0 1604 aa26.56■■□□□ 1.84
TM2D1-211ENST00000496465 KIAA1210Q9ULL0 1709 aa26.54■■□□□ 1.84
TM2D1-211ENST00000496465 PHF8Q9UPP1 1060 aa26.54■■□□□ 1.84
TM2D1-211ENST00000496465 ANKARQ7Z5J8 1434 aa26.54■■□□□ 1.84
TM2D1-211ENST00000496465 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
TM2D1-211ENST00000496465 SPATA31A3Q5VYP0 1347 aa26.52■■□□□ 1.84
TM2D1-211ENST00000496465 QTRT2Q9H974 415 aaKnown RBP26.52■■□□□ 1.84
TM2D1-211ENST00000496465 KRT28Q7Z3Y7 464 aa26.51■■□□□ 1.83
TM2D1-211ENST00000496465 FNBP4Q8N3X1 1017 aaPredicted RBP26.5■■□□□ 1.83
TM2D1-211ENST00000496465 RBM6P78332 1123 aaKnown RBP26.49■■□□□ 1.83
TM2D1-211ENST00000496465 MINK1Q8N4C8 1332 aaPredicted RBP26.47■■□□□ 1.83
TM2D1-211ENST00000496465 PSME1Q06323 249 aa26.47■■□□□ 1.83
TM2D1-211ENST00000496465 EIF3AQ14152 1382 aaKnown RBP26.46■■□□□ 1.83
TM2D1-211ENST00000496465 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
TM2D1-211ENST00000496465 USP21Q9UK80 565 aa26.46■■□□□ 1.83
TM2D1-211ENST00000496465 TULP4Q9NRJ4 1543 aa26.45■■□□□ 1.83
TM2D1-211ENST00000496465 TNS3Q68CZ2 1445 aa26.45■■□□□ 1.82
TM2D1-211ENST00000496465 SBNO1A3KN83 1393 aa26.45■■□□□ 1.82
TM2D1-211ENST00000496465 WASLO00401 505 aaPredicted RBP26.44■■□□□ 1.82
TM2D1-211ENST00000496465 TRPC5Q9UL62 973 aaPredicted RBP26.43■■□□□ 1.82
TM2D1-211ENST00000496465 RGS12O14924 1447 aa26.42■■□□□ 1.82
TM2D1-211ENST00000496465 TRPM3Q9HCF6 1732 aaPredicted RBP26.42■■□□□ 1.82
TM2D1-211ENST00000496465 BCL9LQ86UU0 1499 aa26.42■■□□□ 1.82
TM2D1-211ENST00000496465 PRR36Q9H6K5 1346 aa26.41■■□□□ 1.82
TM2D1-211ENST00000496465 ATRNO75882 1429 aa26.41■■□□□ 1.82
TM2D1-211ENST00000496465 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
TM2D1-211ENST00000496465 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.41■■□□□ 1.82
TM2D1-211ENST00000496465 ITSN1Q15811 1721 aa26.4■■□□□ 1.82
TM2D1-211ENST00000496465 ABCA3Q99758 1704 aa26.39■■□□□ 1.82
TM2D1-211ENST00000496465 UPF1Q92900 1129 aaKnown RBP eCLIP26.39■■□□□ 1.82
TM2D1-211ENST00000496465 ARHGEF10O15013 1369 aa26.38■■□□□ 1.81
TM2D1-211ENST00000496465 ALS2Q96Q42 1657 aa26.37■■□□□ 1.81
TM2D1-211ENST00000496465 NBPF1Q3BBV0 1214 aa26.36■■□□□ 1.81
TM2D1-211ENST00000496465 SLIT2O94813 1529 aa26.35■■□□□ 1.81
TM2D1-211ENST00000496465 ATP7BP35670 1465 aa26.35■■□□□ 1.81
TM2D1-211ENST00000496465 GPRASP1Q5JY77 1395 aa26.33■■□□□ 1.81
TM2D1-211ENST00000496465 CABLES1Q8TDN4 633 aa26.32■■□□□ 1.8
TM2D1-211ENST00000496465 L3MBTL2Q969R5 705 aa26.32■■□□□ 1.8
TM2D1-211ENST00000496465 NWD2Q9ULI1 1742 aa26.31■■□□□ 1.8
TM2D1-211ENST00000496465 LMOD2Q6P5Q4 547 aa26.31■■□□□ 1.8
TM2D1-211ENST00000496465 NUDT16Q96DE0 195 aaKnown RBP26.31■■□□□ 1.8
TM2D1-211ENST00000496465 TOPAZ1Q8N9V7 1692 aa26.31■■□□□ 1.8
TM2D1-211ENST00000496465 HAP1P54257 671 aaPredicted RBP26.3■■□□□ 1.8
TM2D1-211ENST00000496465 UNC5CLQ8IV45 518 aa26.3■■□□□ 1.8
TM2D1-211ENST00000496465 CDK19Q9BWU1 502 aa26.3■■□□□ 1.8
TM2D1-211ENST00000496465 PLCH1Q4KWH8 1693 aa26.3■■□□□ 1.8
TM2D1-211ENST00000496465 NGDNQ8NEJ9 315 aaKnown RBP26.29■■□□□ 1.8
TM2D1-211ENST00000496465 SIN3AQ96ST3 1273 aa26.29■■□□□ 1.8
TM2D1-211ENST00000496465 GJD4Q96KN9 370 aaPredicted RBP26.28■■□□□ 1.8
TM2D1-211ENST00000496465 TRPM1Q7Z4N2 1603 aa26.27■■□□□ 1.8
TM2D1-211ENST00000496465 CRYBG1Q9Y4K1 1723 aa26.27■■□□□ 1.8
TM2D1-211ENST00000496465 QRICH2Q9H0J4 1663 aa26.25■■□□□ 1.79
TM2D1-211ENST00000496465 GLI3P10071 1580 aa26.24■■□□□ 1.79
TM2D1-211ENST00000496465 POLR3AO14802 1390 aaPredicted RBP26.23■■□□□ 1.79
TM2D1-211ENST00000496465 CENPJQ9HC77 1338 aaPredicted RBP26.23■■□□□ 1.79
TM2D1-211ENST00000496465 PLEKHG5O94827 1062 aa26.23■■□□□ 1.79
TM2D1-211ENST00000496465 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
TM2D1-211ENST00000496465 RALGAPBQ86X10 1494 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms