RNA–Protein interactions for RNA: ENST00000496441.5

CDCA7-208, Transcript of cell division cycle associated 7, humanhuman

TSL 2

Gene CDCA7, Length 2,943 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA7-208ENST00000496441 WWC1Q8IX03 1113 aa15.04■□□□□ -0
CDCA7-208ENST00000496441 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
CDCA7-208ENST00000496441 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.04■□□□□ -0
CDCA7-208ENST00000496441 IFT172Q9UG01 1749 aa15.04■□□□□ -0
CDCA7-208ENST00000496441 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
CDCA7-208ENST00000496441 PRAM1Q96QH2 718 aa15.03■□□□□ -0
CDCA7-208ENST00000496441 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
CDCA7-208ENST00000496441 PANK1Q8TE04 598 aa15.03■□□□□ -0
CDCA7-208ENST00000496441 SIGLEC1Q9BZZ2 1709 aa15.02■□□□□ -0
CDCA7-208ENST00000496441 QRICH2Q9H0J4 1663 aa15.02□□□□□ -0.01
CDCA7-208ENST00000496441 E9PSI1 815 aa15.02□□□□□ -0.01
CDCA7-208ENST00000496441 FBLN1P23142 703 aa15.02□□□□□ -0.01
CDCA7-208ENST00000496441 NPC1L1Q9UHC9 1359 aa15.02□□□□□ -0.01
CDCA7-208ENST00000496441 CLUAP1Q96AJ1 413 aa15.01□□□□□ -0.01
CDCA7-208ENST00000496441 BACH2Q9BYV9 841 aa15.01□□□□□ -0.01
CDCA7-208ENST00000496441 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
CDCA7-208ENST00000496441 LMTK2Q8IWU2 1503 aa15.01□□□□□ -0.01
CDCA7-208ENST00000496441 PPLO60437 1756 aa15.01□□□□□ -0.01
CDCA7-208ENST00000496441 NRXN1Q9ULB1 1477 aa15□□□□□ -0.01
CDCA7-208ENST00000496441 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
CDCA7-208ENST00000496441 RPGRIP1LQ68CZ1 1315 aa15□□□□□ -0.01
CDCA7-208ENST00000496441 PLPPR3Q6T4P5 718 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 TSPOAP1O95153 1857 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 INSRP06213 1382 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 ADGRB1O14514 1584 aa14.99□□□□□ -0.01
CDCA7-208ENST00000496441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.99□□□□□ -0.01
CDCA7-208ENST00000496441 NKTRP30414 1462 aaKnown RBP14.98□□□□□ -0.01
CDCA7-208ENST00000496441 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
CDCA7-208ENST00000496441 SLC4A3P48751 1232 aa14.98□□□□□ -0.01
CDCA7-208ENST00000496441 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
CDCA7-208ENST00000496441 RUNDC1Q96C34 613 aa14.98□□□□□ -0.01
CDCA7-208ENST00000496441 SBNO2Q9Y2G9 1366 aa14.97□□□□□ -0.01
CDCA7-208ENST00000496441 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
CDCA7-208ENST00000496441 GLI2P10070 1586 aa14.97□□□□□ -0.01
CDCA7-208ENST00000496441 TRMT2AQ8IZ69 625 aaKnown RBP14.96□□□□□ -0.01
CDCA7-208ENST00000496441 SLC52A1Q9NWF4 448 aa14.96□□□□□ -0.01
CDCA7-208ENST00000496441 POLR3AO14802 1390 aaPredicted RBP14.96□□□□□ -0.01
CDCA7-208ENST00000496441 MYO5BQ9ULV0 1848 aa14.96□□□□□ -0.01
CDCA7-208ENST00000496441 TSR2Q969E8 191 aaKnown RBP14.96□□□□□ -0.02
CDCA7-208ENST00000496441 NEO1Q92859 1461 aa14.95□□□□□ -0.02
CDCA7-208ENST00000496441 CENPQQ7L2Z9 268 aaPredicted RBP14.95□□□□□ -0.02
CDCA7-208ENST00000496441 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
CDCA7-208ENST00000496441 A0A1W2PP64 1363 aa14.94□□□□□ -0.02
CDCA7-208ENST00000496441 IGHDP01880 384 aa14.94□□□□□ -0.02
CDCA7-208ENST00000496441 NEURL4Q96JN8 1562 aa14.94□□□□□ -0.02
CDCA7-208ENST00000496441 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
CDCA7-208ENST00000496441 KDM2BQ8NHM5 1336 aa14.94□□□□□ -0.02
CDCA7-208ENST00000496441 NEXMIFQ5QGS0 1516 aa14.93□□□□□ -0.02
CDCA7-208ENST00000496441 TULP4Q9NRJ4 1543 aa14.93□□□□□ -0.02
CDCA7-208ENST00000496441 CDK19Q9BWU1 502 aa14.93□□□□□ -0.02
CDCA7-208ENST00000496441 MS4A1P11836 297 aa14.93□□□□□ -0.02
CDCA7-208ENST00000496441 ANKRD36BQ8N2N9 1353 aa14.92□□□□□ -0.02
CDCA7-208ENST00000496441 MYO3AQ8NEV4 1616 aa14.92□□□□□ -0.02
CDCA7-208ENST00000496441 FYB1O15117 783 aa14.91□□□□□ -0.02
CDCA7-208ENST00000496441 RLBP1P12271 317 aa14.9□□□□□ -0.02
CDCA7-208ENST00000496441 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
CDCA7-208ENST00000496441 NUTM2FA1L443 756 aa14.9□□□□□ -0.02
CDCA7-208ENST00000496441 TERF2IPQ9NYB0 399 aa14.9□□□□□ -0.02
CDCA7-208ENST00000496441 RARSP54136 660 aaKnown RBP14.89□□□□□ -0.03
CDCA7-208ENST00000496441 RICTORQ6R327 1708 aa14.89□□□□□ -0.03
CDCA7-208ENST00000496441 ARHGEF28Q8N1W1 1705 aaKnown RBP14.89□□□□□ -0.03
CDCA7-208ENST00000496441 NCKAP5LQ9HCH0 1330 aa14.89□□□□□ -0.03
CDCA7-208ENST00000496441 ZC3H13Q5T200 1668 aaKnown RBP14.89□□□□□ -0.03
CDCA7-208ENST00000496441 RTL5Q5HYW3 569 aaPredicted RBP14.89□□□□□ -0.03
CDCA7-208ENST00000496441 ESF1Q9H501 851 aaKnown RBP14.89□□□□□ -0.03
CDCA7-208ENST00000496441 MAPK8IP3Q9UPT6 1336 aa14.88□□□□□ -0.03
CDCA7-208ENST00000496441 DEKP35659 375 aaKnown RBP14.88□□□□□ -0.03
CDCA7-208ENST00000496441 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
CDCA7-208ENST00000496441 TXNDC2Q86VQ3 553 aa14.87□□□□□ -0.03
CDCA7-208ENST00000496441 YTHDC2Q9H6S0 1430 aaKnown RBP14.87□□□□□ -0.03
CDCA7-208ENST00000496441 SHPRHQ149N8 1683 aa14.87□□□□□ -0.03
CDCA7-208ENST00000496441 HMOX1P09601 288 aa14.86□□□□□ -0.03
CDCA7-208ENST00000496441 DAXXQ9UER7 740 aaPredicted RBP14.86□□□□□ -0.03
CDCA7-208ENST00000496441 EXOSC9Q06265 439 aaKnown RBP14.86□□□□□ -0.03
CDCA7-208ENST00000496441 BCL11AQ9H165 835 aa14.86□□□□□ -0.03
CDCA7-208ENST00000496441 ZRANB1Q9UGI0 708 aa14.86□□□□□ -0.03
CDCA7-208ENST00000496441 FAM161AQ3B820 660 aa14.85□□□□□ -0.03
CDCA7-208ENST00000496441 RIPK4P57078 832 aa14.85□□□□□ -0.03
CDCA7-208ENST00000496441 C8orf34Q49A92 452 aa14.85□□□□□ -0.03
CDCA7-208ENST00000496441 FTSJ3Q8IY81 847 aaKnown RBP14.84□□□□□ -0.03
CDCA7-208ENST00000496441 PREX1Q8TCU6 1659 aa14.84□□□□□ -0.03
CDCA7-208ENST00000496441 MYH16Q9H6N6 1097 aa14.84□□□□□ -0.03
CDCA7-208ENST00000496441 SMC4Q9NTJ3 1288 aa14.84□□□□□ -0.03
CDCA7-208ENST00000496441 NEFMP07197 916 aa14.83□□□□□ -0.03
CDCA7-208ENST00000496441 TMPOP42166 694 aaKnown RBP14.83□□□□□ -0.03
CDCA7-208ENST00000496441 PDE3AQ14432 1141 aa14.83□□□□□ -0.03
CDCA7-208ENST00000496441 WDR63Q8IWG1 891 aa14.83□□□□□ -0.03
CDCA7-208ENST00000496441 PCDHB15Q9Y5E8 787 aa14.83□□□□□ -0.03
CDCA7-208ENST00000496441 ARHGAP31Q2M1Z3 1444 aa14.83□□□□□ -0.04
CDCA7-208ENST00000496441 SOX12O15370 315 aa14.83□□□□□ -0.04
CDCA7-208ENST00000496441 DIAPH1O60610 1272 aaKnown RBP14.83□□□□□ -0.04
CDCA7-208ENST00000496441 THUMPD2Q9BTF0 503 aaKnown RBP14.83□□□□□ -0.04
CDCA7-208ENST00000496441 ABCC11Q96J66 1382 aa14.82□□□□□ -0.04
CDCA7-208ENST00000496441 ELL2O00472 640 aaPredicted RBP14.82□□□□□ -0.04
CDCA7-208ENST00000496441 NGEFQ8N5V2 710 aa14.82□□□□□ -0.04
CDCA7-208ENST00000496441 TMEM131LA2VDJ0 1609 aa14.82□□□□□ -0.04
CDCA7-208ENST00000496441 PTPRMP28827 1452 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms