RNA–Protein interactions for RNA: ENST00000495561.1

SRRM1-219, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-219ENST00000495561 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRRM1-219ENST00000495561 MMP16P51512 607 aa11.5□□□□□ -0.57
SRRM1-219ENST00000495561 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
SRRM1-219ENST00000495561 HOXA2O43364 376 aa11.49□□□□□ -0.57
SRRM1-219ENST00000495561 CLCN1P35523 988 aa11.49□□□□□ -0.57
SRRM1-219ENST00000495561 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
SRRM1-219ENST00000495561 FAM217BQ9NTX9 383 aaPredicted RBP11.49□□□□□ -0.57
SRRM1-219ENST00000495561 ZBTB24O43167 697 aaPredicted RBP11.48□□□□□ -0.57
SRRM1-219ENST00000495561 TOR4AQ9NXH8 423 aa11.48□□□□□ -0.57
SRRM1-219ENST00000495561 ST8SIA5O15466 376 aa11.47□□□□□ -0.57
SRRM1-219ENST00000495561 POTECB2RU33 542 aa11.46□□□□□ -0.57
SRRM1-219ENST00000495561 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.57
SRRM1-219ENST00000495561 GUCA2AQ02747 115 aa11.46□□□□□ -0.57
SRRM1-219ENST00000495561 AAASQ9NRG9 546 aa11.46□□□□□ -0.57
SRRM1-219ENST00000495561 CYP4X1Q8N118 509 aa11.45□□□□□ -0.58
SRRM1-219ENST00000495561 TRIM32Q13049 653 aa11.44□□□□□ -0.58
SRRM1-219ENST00000495561 ZNF775Q96BV0 537 aaPredicted RBP11.44□□□□□ -0.58
SRRM1-219ENST00000495561 KRI1Q8N9T8 703 aaKnown RBP11.43□□□□□ -0.58
SRRM1-219ENST00000495561 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
SRRM1-219ENST00000495561 WNT7AO00755 349 aa11.41□□□□□ -0.58
SRRM1-219ENST00000495561 AVPP01185 164 aa11.41□□□□□ -0.58
SRRM1-219ENST00000495561 NUTM1Q86Y26 1132 aa11.41□□□□□ -0.58
SRRM1-219ENST00000495561 SYMPKQ92797 1274 aaKnown RBP11.41□□□□□ -0.58
SRRM1-219ENST00000495561 CRIPAKQ8N1N5 446 aa11.4□□□□□ -0.58
SRRM1-219ENST00000495561 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
SRRM1-219ENST00000495561 TTC24A2A3L6 582 aaPredicted RBP11.38□□□□□ -0.59
SRRM1-219ENST00000495561 BARGINQ6ZT62 677 aa11.38□□□□□ -0.59
SRRM1-219ENST00000495561 ZMYND10O75800 440 aa11.37□□□□□ -0.59
SRRM1-219ENST00000495561 JUNDP17535 347 aa11.37□□□□□ -0.59
SRRM1-219ENST00000495561 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
SRRM1-219ENST00000495561 SSTR3P32745 418 aaPredicted RBP11.36□□□□□ -0.59
SRRM1-219ENST00000495561 SNIP1Q8TAD8 396 aaKnown RBP11.36□□□□□ -0.59
SRRM1-219ENST00000495561 MRGPRX2Q96LB1 330 aa11.36□□□□□ -0.59
SRRM1-219ENST00000495561 AXIN1O15169 862 aa11.35□□□□□ -0.59
SRRM1-219ENST00000495561 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
SRRM1-219ENST00000495561 PCDHGC3Q9UN70 934 aa11.35□□□□□ -0.59
SRRM1-219ENST00000495561 FDX1P10109 184 aa11.34□□□□□ -0.59
SRRM1-219ENST00000495561 SMPD1P17405 629 aa11.34□□□□□ -0.59
SRRM1-219ENST00000495561 CTC1Q2NKJ3 1217 aa11.34□□□□□ -0.59
SRRM1-219ENST00000495561 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
SRRM1-219ENST00000495561 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-219ENST00000495561 SKOR1P84550 965 aa11.33□□□□□ -0.6
SRRM1-219ENST00000495561 TTLL12Q14166 644 aaPredicted RBP11.33□□□□□ -0.6
SRRM1-219ENST00000495561 AMHR2Q16671 573 aa11.33□□□□□ -0.6
SRRM1-219ENST00000495561 SPIRE2Q8WWL2 714 aa11.33□□□□□ -0.6
SRRM1-219ENST00000495561 J3QL48 77 aa11.31□□□□□ -0.6
SRRM1-219ENST00000495561 C6orf229H3BNL8 230 aa11.3□□□□□ -0.6
SRRM1-219ENST00000495561 NDUFV2P19404 249 aa11.3□□□□□ -0.6
SRRM1-219ENST00000495561 WNT7BP56706 349 aa11.3□□□□□ -0.6
SRRM1-219ENST00000495561 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
SRRM1-219ENST00000495561 GIGYF2Q6Y7W6 1299 aaKnown RBP11.3□□□□□ -0.6
SRRM1-219ENST00000495561 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
SRRM1-219ENST00000495561 PTCRAQ6ISU1 281 aaPredicted RBP11.29□□□□□ -0.6
SRRM1-219ENST00000495561 GMPR2Q9P2T1 348 aaKnown RBP11.29□□□□□ -0.6
SRRM1-219ENST00000495561 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
SRRM1-219ENST00000495561 MS4A1P11836 297 aa11.26□□□□□ -0.61
SRRM1-219ENST00000495561 HPS1Q92902 700 aa11.25□□□□□ -0.61
SRRM1-219ENST00000495561 C11orf95C9JLR9 678 aaPredicted RBP11.24□□□□□ -0.61
SRRM1-219ENST00000495561 BEGAINQ9BUH8 593 aa11.24□□□□□ -0.61
SRRM1-219ENST00000495561 CCNYL3P0C7X3 344 aa11.23□□□□□ -0.61
SRRM1-219ENST00000495561 PTPRNQ16849 979 aa11.22□□□□□ -0.61
SRRM1-219ENST00000495561 PARP9Q8IXQ6 854 aa11.22□□□□□ -0.61
SRRM1-219ENST00000495561 PRR7Q8TB68 274 aa11.22□□□□□ -0.61
SRRM1-219ENST00000495561 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
SRRM1-219ENST00000495561 TRIM66O15016 1216 aa11.21□□□□□ -0.61
SRRM1-219ENST00000495561 MTMR2Q13614 643 aa11.21□□□□□ -0.61
SRRM1-219ENST00000495561 TREML4Q6UXN2 200 aa11.21□□□□□ -0.61
SRRM1-219ENST00000495561 TBC1D2Q9BYX2 928 aa11.21□□□□□ -0.61
SRRM1-219ENST00000495561 ALDH1A1P00352 501 aa11.2□□□□□ -0.62
SRRM1-219ENST00000495561 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
SRRM1-219ENST00000495561 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
SRRM1-219ENST00000495561 SIAH2O43255 324 aa11.19□□□□□ -0.62
SRRM1-219ENST00000495561 SH3BP2P78314 561 aa11.19□□□□□ -0.62
SRRM1-219ENST00000495561 EVA1BQ9NVM1 165 aa11.19□□□□□ -0.62
SRRM1-219ENST00000495561 SPDYE5A6NIY4 337 aa11.18□□□□□ -0.62
SRRM1-219ENST00000495561 DESI1Q6ICB0 168 aa11.18□□□□□ -0.62
SRRM1-219ENST00000495561 RSBN1LQ6PCB5 846 aaPredicted RBP11.18□□□□□ -0.62
SRRM1-219ENST00000495561 UNC93B1Q9H1C4 597 aa11.18□□□□□ -0.62
SRRM1-219ENST00000495561 GJA5P36382 358 aa11.17□□□□□ -0.62
SRRM1-219ENST00000495561 AK7Q96M32 723 aa11.17□□□□□ -0.62
SRRM1-219ENST00000495561 KCNH2Q12809 1159 aa11.16□□□□□ -0.62
SRRM1-219ENST00000495561 SNRPBP14678 240 aaKnown RBP11.15□□□□□ -0.62
SRRM1-219ENST00000495561 DIXDC1Q155Q3 683 aa11.15□□□□□ -0.62
SRRM1-219ENST00000495561 LINC01559Q495D7 138 aa11.15□□□□□ -0.62
SRRM1-219ENST00000495561 PCDHB15Q9Y5E8 787 aa11.15□□□□□ -0.62
SRRM1-219ENST00000495561 SPTLC1O15269 473 aa11.14□□□□□ -0.63
SRRM1-219ENST00000495561 BAP1Q92560 729 aa11.14□□□□□ -0.63
SRRM1-219ENST00000495561 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
SRRM1-219ENST00000495561 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
SRRM1-219ENST00000495561 CFAP99D6REC4 459 aa11.12□□□□□ -0.63
SRRM1-219ENST00000495561 WASF2Q9Y6W5 498 aa11.12□□□□□ -0.63
SRRM1-219ENST00000495561 WFS1O76024 890 aa11.11□□□□□ -0.63
SRRM1-219ENST00000495561 LYPD8Q6UX82 237 aa11.11□□□□□ -0.63
SRRM1-219ENST00000495561 ZNF511Q8NB15 262 aa11.11□□□□□ -0.63
SRRM1-219ENST00000495561 HRCP23327 699 aa11.1□□□□□ -0.63
SRRM1-219ENST00000495561 NFX1Q12986 1120 aaKnown RBP11.1□□□□□ -0.63
SRRM1-219ENST00000495561 RIC3Q7Z5B4 369 aa11.1□□□□□ -0.63
SRRM1-219ENST00000495561 ZBTB3Q9H5J0 574 aa11.1□□□□□ -0.63
SRRM1-219ENST00000495561 KIFC2Q96AC6 838 aa11.09□□□□□ -0.63
SRRM1-219ENST00000495561 TLL2Q9Y6L7 1015 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms