RNA–Protein interactions for RNA: ENST00000494262.5

CDKN2A-206, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 989 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-206ENST00000494262 KNDC1Q76NI1 1749 aa32.75■■■□□ 2.83
CDKN2A-206ENST00000494262 ORAI2Q96SN7 254 aa32.75■■■□□ 2.83
CDKN2A-206ENST00000494262 CFAP70Q5T0N1 1121 aa32.74■■■□□ 2.83
CDKN2A-206ENST00000494262 LRRC59Q96AG4 307 aaKnown RBP32.74■■■□□ 2.83
CDKN2A-206ENST00000494262 CDC42BPGQ6DT37 1551 aa32.74■■■□□ 2.83
CDKN2A-206ENST00000494262 PLEKHH1Q9ULM0 1364 aa32.71■■■□□ 2.83
CDKN2A-206ENST00000494262 LAMC1P11047 1609 aa32.71■■■□□ 2.83
CDKN2A-206ENST00000494262 NUTM2BA6NNL0 878 aaPredicted RBP32.71■■■□□ 2.83
CDKN2A-206ENST00000494262 NUTM2EB1AL46 878 aaPredicted RBP32.71■■■□□ 2.83
CDKN2A-206ENST00000494262 NUTM2AQ8IVF1 878 aaPredicted RBP32.71■■■□□ 2.83
CDKN2A-206ENST00000494262 DHX57Q6P158 1386 aaKnown RBP32.68■■■□□ 2.82
CDKN2A-206ENST00000494262 ESCO1Q5FWF5 840 aa32.65■■■□□ 2.82
CDKN2A-206ENST00000494262 KDM2AQ9Y2K7 1162 aa32.65■■■□□ 2.82
CDKN2A-206ENST00000494262 PNPLA6Q8IY17 1366 aa32.65■■■□□ 2.82
CDKN2A-206ENST00000494262 DCAF11Q8TEB1 546 aa32.64■■■□□ 2.82
CDKN2A-206ENST00000494262 SIRT1Q96EB6 747 aa32.64■■■□□ 2.82
CDKN2A-206ENST00000494262 SOS2Q07890 1332 aaPredicted RBP32.62■■■□□ 2.81
CDKN2A-206ENST00000494262 NUTM2FA1L443 756 aa32.62■■■□□ 2.81
CDKN2A-206ENST00000494262 ZNF772Q68DY9 489 aaPredicted RBP32.59■■■□□ 2.81
CDKN2A-206ENST00000494262 PRAM1Q96QH2 718 aa32.57■■■□□ 2.8
CDKN2A-206ENST00000494262 NPHP3Q7Z494 1330 aa32.56■■■□□ 2.8
CDKN2A-206ENST00000494262 FMN2Q9NZ56 1722 aa32.56■■■□□ 2.8
CDKN2A-206ENST00000494262 ADGRB1O14514 1584 aa32.55■■■□□ 2.8
CDKN2A-206ENST00000494262 SAFB2Q14151 953 aaKnown RBP eCLIP32.55■■■□□ 2.8
CDKN2A-206ENST00000494262 STAC3Q96MF2 364 aa32.55■■■□□ 2.8
CDKN2A-206ENST00000494262 FOXO3O43524 673 aa32.53■■■□□ 2.8
CDKN2A-206ENST00000494262 POGKQ9P215 609 aa32.53■■■□□ 2.8
CDKN2A-206ENST00000494262 DLC1Q96QB1 1528 aa32.52■■■□□ 2.8
CDKN2A-206ENST00000494262 AFF2P51816 1311 aa32.51■■■□□ 2.8
CDKN2A-206ENST00000494262 PXDNQ92626 1479 aa32.5■■■□□ 2.79
CDKN2A-206ENST00000494262 XPCQ01831 940 aaPredicted RBP32.5■■■□□ 2.79
CDKN2A-206ENST00000494262 C8orf37Q96NL8 207 aa32.5■■■□□ 2.79
CDKN2A-206ENST00000494262 TRAK1Q9UPV9 953 aa32.5■■■□□ 2.79
CDKN2A-206ENST00000494262 ADAMTS2O95450 1211 aa32.48■■■□□ 2.79
CDKN2A-206ENST00000494262 KIF1AQ12756 1690 aa32.45■■■□□ 2.79
CDKN2A-206ENST00000494262 COL22A1Q8NFW1 1626 aaPredicted RBP32.44■■■□□ 2.78
CDKN2A-206ENST00000494262 RGPD8O14715 1765 aaPredicted RBP32.41■■■□□ 2.78
CDKN2A-206ENST00000494262 RXRBP28702 533 aa32.41■■■□□ 2.78
CDKN2A-206ENST00000494262 NGLY1Q96IV0 654 aa32.41■■■□□ 2.78
CDKN2A-206ENST00000494262 PHF8Q9UPP1 1060 aa32.41■■■□□ 2.78
CDKN2A-206ENST00000494262 HIRIP3Q9BW71 556 aaPredicted RBP32.39■■■□□ 2.78
CDKN2A-206ENST00000494262 ADGRB2O60241 1585 aa32.39■■■□□ 2.78
CDKN2A-206ENST00000494262 MINK1Q8N4C8 1332 aaPredicted RBP32.38■■■□□ 2.77
CDKN2A-206ENST00000494262 KRT28Q7Z3Y7 464 aa32.37■■■□□ 2.77
CDKN2A-206ENST00000494262 ANKARQ7Z5J8 1434 aa32.35■■■□□ 2.77
CDKN2A-206ENST00000494262 SPATA31A3Q5VYP0 1347 aa32.34■■■□□ 2.77
CDKN2A-206ENST00000494262 QTRT2Q9H974 415 aaKnown RBP32.34■■■□□ 2.77
CDKN2A-206ENST00000494262 USP32Q8NFA0 1604 aa32.33■■■□□ 2.77
CDKN2A-206ENST00000494262 PSME1Q06323 249 aa32.31■■■□□ 2.76
CDKN2A-206ENST00000494262 ARHGEF28Q8N1W1 1705 aaKnown RBP32.31■■■□□ 2.76
CDKN2A-206ENST00000494262 PMFBP1Q8TBY8 1022 aa32.3■■■□□ 2.76
CDKN2A-206ENST00000494262 EIF3AQ14152 1382 aaKnown RBP32.3■■■□□ 2.76
CDKN2A-206ENST00000494262 USP21Q9UK80 565 aa32.29■■■□□ 2.76
CDKN2A-206ENST00000494262 CDK12Q9NYV4 1490 aaPredicted RBP32.29■■■□□ 2.76
CDKN2A-206ENST00000494262 KIAA1210Q9ULL0 1709 aa32.29■■■□□ 2.76
CDKN2A-206ENST00000494262 WASLO00401 505 aaPredicted RBP32.28■■■□□ 2.76
CDKN2A-206ENST00000494262 RBM6P78332 1123 aaKnown RBP32.28■■■□□ 2.76
CDKN2A-206ENST00000494262 FNBP4Q8N3X1 1017 aaPredicted RBP32.27■■■□□ 2.76
CDKN2A-206ENST00000494262 TNS3Q68CZ2 1445 aa32.26■■■□□ 2.76
CDKN2A-206ENST00000494262 TULP4Q9NRJ4 1543 aa32.26■■■□□ 2.76
CDKN2A-206ENST00000494262 PRR36Q9H6K5 1346 aa32.26■■■□□ 2.75
CDKN2A-206ENST00000494262 MARF1Q9Y4F3 1742 aaKnown RBP32.23■■■□□ 2.75
CDKN2A-206ENST00000494262 SBNO1A3KN83 1393 aa32.23■■■□□ 2.75
CDKN2A-206ENST00000494262 NBPF1Q3BBV0 1214 aa32.23■■■□□ 2.75
CDKN2A-206ENST00000494262 SIN3AQ96ST3 1273 aa32.22■■■□□ 2.75
CDKN2A-206ENST00000494262 LMOD2Q6P5Q4 547 aa32.21■■■□□ 2.75
CDKN2A-206ENST00000494262 TRPC5Q9UL62 973 aaPredicted RBP32.21■■■□□ 2.75
CDKN2A-206ENST00000494262 RGS12O14924 1447 aa32.2■■■□□ 2.75
CDKN2A-206ENST00000494262 L3MBTL2Q969R5 705 aa32.2■■■□□ 2.75
CDKN2A-206ENST00000494262 PLEKHG5O94827 1062 aa32.19■■■□□ 2.74
CDKN2A-206ENST00000494262 HAP1P54257 671 aaPredicted RBP32.18■■■□□ 2.74
CDKN2A-206ENST00000494262 ARHGEF10O15013 1369 aa32.18■■■□□ 2.74
CDKN2A-206ENST00000494262 ATRNO75882 1429 aa32.17■■■□□ 2.74
CDKN2A-206ENST00000494262 NEUROD1Q13562 356 aa32.17■■■□□ 2.74
CDKN2A-206ENST00000494262 GPRASP1Q5JY77 1395 aa32.17■■■□□ 2.74
CDKN2A-206ENST00000494262 CABLES1Q8TDN4 633 aa32.16■■■□□ 2.74
CDKN2A-206ENST00000494262 BCL9LQ86UU0 1499 aa32.16■■■□□ 2.74
CDKN2A-206ENST00000494262 NGDNQ8NEJ9 315 aaKnown RBP32.14■■■□□ 2.74
CDKN2A-206ENST00000494262 NUDT16Q96DE0 195 aaKnown RBP32.14■■■□□ 2.74
CDKN2A-206ENST00000494262 CDK19Q9BWU1 502 aa32.14■■■□□ 2.74
CDKN2A-206ENST00000494262 ATP7BP35670 1465 aa32.13■■■□□ 2.73
CDKN2A-206ENST00000494262 TRPM3Q9HCF6 1732 aaPredicted RBP32.12■■■□□ 2.73
CDKN2A-206ENST00000494262 UPF1Q92900 1129 aaKnown RBP eCLIP32.12■■■□□ 2.73
CDKN2A-206ENST00000494262 ITSN1Q15811 1721 aa32.1■■■□□ 2.73
CDKN2A-206ENST00000494262 SLIT2O94813 1529 aa32.08■■■□□ 2.73
CDKN2A-206ENST00000494262 ABCA3Q99758 1704 aa32.08■■■□□ 2.73
CDKN2A-206ENST00000494262 CENPJQ9HC77 1338 aaPredicted RBP32.07■■■□□ 2.72
CDKN2A-206ENST00000494262 UNC5CLQ8IV45 518 aa32.07■■■□□ 2.72
CDKN2A-206ENST00000494262 PAK3O75914 559 aaPredicted RBP32.06■■■□□ 2.72
CDKN2A-206ENST00000494262 ALS2Q96Q42 1657 aa32.05■■■□□ 2.72
CDKN2A-206ENST00000494262 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.05■■■□□ 2.72
CDKN2A-206ENST00000494262 GJD4Q96KN9 370 aaPredicted RBP32.03■■■□□ 2.72
CDKN2A-206ENST00000494262 CCDC61Q9Y6R9 512 aa32.02■■■□□ 2.72
CDKN2A-206ENST00000494262 TRPM1Q7Z4N2 1603 aa32.01■■■□□ 2.72
CDKN2A-206ENST00000494262 TOPAZ1Q8N9V7 1692 aa32.01■■■□□ 2.71
CDKN2A-206ENST00000494262 QRICH2Q9H0J4 1663 aa31.99■■■□□ 2.71
CDKN2A-206ENST00000494262 SRPK2P78362 688 aaKnown RBP31.99■■■□□ 2.71
CDKN2A-206ENST00000494262 PLCH1Q4KWH8 1693 aa31.99■■■□□ 2.71
CDKN2A-206ENST00000494262 TRIM26Q12899 539 aaPredicted RBP31.98■■■□□ 2.71
CDKN2A-206ENST00000494262 ACEP12821 1306 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms