RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 NUTM2BA6NNL0 878 aaPredicted RBP14.38□□□□□ -0.11
UFD1-210ENST00000494054 NUTM2EB1AL46 878 aaPredicted RBP14.38□□□□□ -0.11
UFD1-210ENST00000494054 NUTM2AQ8IVF1 878 aaPredicted RBP14.38□□□□□ -0.11
UFD1-210ENST00000494054 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
UFD1-210ENST00000494054 YTHDC2Q9H6S0 1430 aaKnown RBP14.37□□□□□ -0.11
UFD1-210ENST00000494054 MYOM2P54296 1465 aa14.37□□□□□ -0.11
UFD1-210ENST00000494054 MEX3CQ5U5Q3 659 aaKnown RBP14.36□□□□□ -0.11
UFD1-210ENST00000494054 PNPLA6Q8IY17 1366 aa14.34□□□□□ -0.11
UFD1-210ENST00000494054 CDC42BPGQ6DT37 1551 aa14.34□□□□□ -0.11
UFD1-210ENST00000494054 LAMC1P11047 1609 aa14.34□□□□□ -0.11
UFD1-210ENST00000494054 NUTM2FA1L443 756 aa14.34□□□□□ -0.11
UFD1-210ENST00000494054 ESCO1Q5FWF5 840 aa14.34□□□□□ -0.11
UFD1-210ENST00000494054 SIRT1Q96EB6 747 aa14.34□□□□□ -0.11
UFD1-210ENST00000494054 SOS2Q07890 1332 aaPredicted RBP14.34□□□□□ -0.11
UFD1-210ENST00000494054 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
UFD1-210ENST00000494054 KDM2AQ9Y2K7 1162 aa14.33□□□□□ -0.12
UFD1-210ENST00000494054 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
UFD1-210ENST00000494054 DCAF11Q8TEB1 546 aa14.32□□□□□ -0.12
UFD1-210ENST00000494054 ZNF772Q68DY9 489 aaPredicted RBP14.31□□□□□ -0.12
UFD1-210ENST00000494054 FOXO3O43524 673 aa14.3□□□□□ -0.12
UFD1-210ENST00000494054 XPCQ01831 940 aaPredicted RBP14.29□□□□□ -0.12
UFD1-210ENST00000494054 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
UFD1-210ENST00000494054 PRAM1Q96QH2 718 aa14.29□□□□□ -0.12
UFD1-210ENST00000494054 ADGRB1O14514 1584 aa14.29□□□□□ -0.12
UFD1-210ENST00000494054 ADAMTS2O95450 1211 aa14.28□□□□□ -0.12
UFD1-210ENST00000494054 AFF2P51816 1311 aa14.28□□□□□ -0.12
UFD1-210ENST00000494054 NPHP3Q7Z494 1330 aa14.28□□□□□ -0.12
UFD1-210ENST00000494054 C8orf37Q96NL8 207 aa14.28□□□□□ -0.12
UFD1-210ENST00000494054 FMN2Q9NZ56 1722 aa14.28□□□□□ -0.12
UFD1-210ENST00000494054 PXDNQ92626 1479 aa14.27□□□□□ -0.12
UFD1-210ENST00000494054 TRAK1Q9UPV9 953 aa14.27□□□□□ -0.13
UFD1-210ENST00000494054 POGKQ9P215 609 aa14.26□□□□□ -0.13
UFD1-210ENST00000494054 DLC1Q96QB1 1528 aa14.25□□□□□ -0.13
UFD1-210ENST00000494054 STAC3Q96MF2 364 aa14.25□□□□□ -0.13
UFD1-210ENST00000494054 RXRBP28702 533 aa14.24□□□□□ -0.13
UFD1-210ENST00000494054 NGLY1Q96IV0 654 aa14.24□□□□□ -0.13
UFD1-210ENST00000494054 PHF8Q9UPP1 1060 aa14.23□□□□□ -0.13
UFD1-210ENST00000494054 COL22A1Q8NFW1 1626 aaPredicted RBP14.23□□□□□ -0.13
UFD1-210ENST00000494054 RGPD8O14715 1765 aaPredicted RBP14.22□□□□□ -0.13
UFD1-210ENST00000494054 KRT28Q7Z3Y7 464 aa14.22□□□□□ -0.13
UFD1-210ENST00000494054 HIRIP3Q9BW71 556 aaPredicted RBP14.22□□□□□ -0.13
UFD1-210ENST00000494054 QTRT2Q9H974 415 aaKnown RBP14.22□□□□□ -0.13
UFD1-210ENST00000494054 SPATA31A3Q5VYP0 1347 aa14.21□□□□□ -0.13
UFD1-210ENST00000494054 MINK1Q8N4C8 1332 aaPredicted RBP14.21□□□□□ -0.13
UFD1-210ENST00000494054 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
UFD1-210ENST00000494054 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
UFD1-210ENST00000494054 ADGRB2O60241 1585 aa14.19□□□□□ -0.14
UFD1-210ENST00000494054 FNBP4Q8N3X1 1017 aaPredicted RBP14.19□□□□□ -0.14
UFD1-210ENST00000494054 PMFBP1Q8TBY8 1022 aa14.19□□□□□ -0.14
UFD1-210ENST00000494054 USP21Q9UK80 565 aa14.19□□□□□ -0.14
UFD1-210ENST00000494054 PRR36Q9H6K5 1346 aa14.18□□□□□ -0.14
UFD1-210ENST00000494054 ANKARQ7Z5J8 1434 aa14.18□□□□□ -0.14
UFD1-210ENST00000494054 RBM6P78332 1123 aaKnown RBP14.18□□□□□ -0.14
UFD1-210ENST00000494054 CDK12Q9NYV4 1490 aaPredicted RBP14.18□□□□□ -0.14
UFD1-210ENST00000494054 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
UFD1-210ENST00000494054 PSME1Q06323 249 aa14.17□□□□□ -0.14
UFD1-210ENST00000494054 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
UFD1-210ENST00000494054 SIN3AQ96ST3 1273 aa14.16□□□□□ -0.14
UFD1-210ENST00000494054 RGS12O14924 1447 aa14.15□□□□□ -0.14
UFD1-210ENST00000494054 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
UFD1-210ENST00000494054 CABLES1Q8TDN4 633 aa14.15□□□□□ -0.14
UFD1-210ENST00000494054 UPF1Q92900 1129 aaKnown RBP eCLIP14.15□□□□□ -0.14
UFD1-210ENST00000494054 ARHGEF28Q8N1W1 1705 aaKnown RBP14.15□□□□□ -0.14
UFD1-210ENST00000494054 TNS3Q68CZ2 1445 aa14.15□□□□□ -0.14
UFD1-210ENST00000494054 SBNO1A3KN83 1393 aa14.14□□□□□ -0.15
UFD1-210ENST00000494054 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
UFD1-210ENST00000494054 L3MBTL2Q969R5 705 aa14.14□□□□□ -0.15
UFD1-210ENST00000494054 TRPC5Q9UL62 973 aaPredicted RBP14.14□□□□□ -0.15
UFD1-210ENST00000494054 TULP4Q9NRJ4 1543 aa14.14□□□□□ -0.15
UFD1-210ENST00000494054 LMOD2Q6P5Q4 547 aa14.13□□□□□ -0.15
UFD1-210ENST00000494054 ATRNO75882 1429 aa14.13□□□□□ -0.15
UFD1-210ENST00000494054 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
UFD1-210ENST00000494054 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
UFD1-210ENST00000494054 EIF3AQ14152 1382 aaKnown RBP14.12□□□□□ -0.15
UFD1-210ENST00000494054 NUDT16Q96DE0 195 aaKnown RBP14.12□□□□□ -0.15
UFD1-210ENST00000494054 NEUROD1Q13562 356 aa14.11□□□□□ -0.15
UFD1-210ENST00000494054 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
UFD1-210ENST00000494054 SLIT2O94813 1529 aa14.1□□□□□ -0.15
UFD1-210ENST00000494054 NGDNQ8NEJ9 315 aaKnown RBP14.1□□□□□ -0.15
UFD1-210ENST00000494054 ATP7BP35670 1465 aa14.1□□□□□ -0.15
UFD1-210ENST00000494054 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
UFD1-210ENST00000494054 GPRASP1Q5JY77 1395 aa14.09□□□□□ -0.15
UFD1-210ENST00000494054 HAP1P54257 671 aaPredicted RBP14.09□□□□□ -0.15
UFD1-210ENST00000494054 UNC5CLQ8IV45 518 aa14.09□□□□□ -0.15
UFD1-210ENST00000494054 TRPM3Q9HCF6 1732 aaPredicted RBP14.09□□□□□ -0.15
UFD1-210ENST00000494054 GJD4Q96KN9 370 aaPredicted RBP14.08□□□□□ -0.16
UFD1-210ENST00000494054 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
UFD1-210ENST00000494054 FAM83GA6ND36 823 aa14.06□□□□□ -0.16
UFD1-210ENST00000494054 ALS2Q96Q42 1657 aa14.06□□□□□ -0.16
UFD1-210ENST00000494054 CENPJQ9HC77 1338 aaPredicted RBP14.06□□□□□ -0.16
UFD1-210ENST00000494054 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
UFD1-210ENST00000494054 CCDC61Q9Y6R9 512 aa14.05□□□□□ -0.16
UFD1-210ENST00000494054 RALGAPBQ86X10 1494 aa14.05□□□□□ -0.16
UFD1-210ENST00000494054 GLI3P10071 1580 aa14.05□□□□□ -0.16
UFD1-210ENST00000494054 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.04□□□□□ -0.16
UFD1-210ENST00000494054 PLEKHG3A1L390 1219 aa14.04□□□□□ -0.16
UFD1-210ENST00000494054 NBPF8Q3BBV2 869 aa14.04□□□□□ -0.16
UFD1-210ENST00000494054 ACEP12821 1306 aa14.04□□□□□ -0.16
UFD1-210ENST00000494054 ITSN1Q15811 1721 aa14.04□□□□□ -0.16
UFD1-210ENST00000494054 VPS72Q15906 364 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms