RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 RRBP1Q9P2E9 1410 aaKnown RBP26.77■■□□□ 1.88
NUP50-218ENST00000493456 PPARGC1BQ86YN6 1023 aaKnown RBP26.76■■□□□ 1.87
NUP50-218ENST00000493456 CDC42BPGQ6DT37 1551 aa26.75■■□□□ 1.87
NUP50-218ENST00000493456 ATRNO75882 1429 aa26.75■■□□□ 1.87
NUP50-218ENST00000493456 MYOM2P54296 1465 aa26.74■■□□□ 1.87
NUP50-218ENST00000493456 PPLO60437 1756 aa26.74■■□□□ 1.87
NUP50-218ENST00000493456 NPHP3Q7Z494 1330 aa26.74■■□□□ 1.87
NUP50-218ENST00000493456 FOXD1Q16676 465 aa26.72■■□□□ 1.87
NUP50-218ENST00000493456 PXDNQ92626 1479 aa26.7■■□□□ 1.87
NUP50-218ENST00000493456 ESCO1Q5FWF5 840 aa26.68■■□□□ 1.86
NUP50-218ENST00000493456 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
NUP50-218ENST00000493456 MARF1Q9Y4F3 1742 aaKnown RBP26.67■■□□□ 1.86
NUP50-218ENST00000493456 LRPPRCP42704 1394 aaKnown RBP26.66■■□□□ 1.86
NUP50-218ENST00000493456 BCL9LQ86UU0 1499 aa26.66■■□□□ 1.86
NUP50-218ENST00000493456 TECPR2O15040 1411 aa26.64■■□□□ 1.85
NUP50-218ENST00000493456 CCDC125Q86Z20 511 aa26.63■■□□□ 1.85
NUP50-218ENST00000493456 ZRANB1Q9UGI0 708 aa26.62■■□□□ 1.85
NUP50-218ENST00000493456 FOXO3O43524 673 aa26.61■■□□□ 1.85
NUP50-218ENST00000493456 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.6■■□□□ 1.85
NUP50-218ENST00000493456 GJD4Q96KN9 370 aaPredicted RBP26.58■■□□□ 1.85
NUP50-218ENST00000493456 KNDC1Q76NI1 1749 aa26.58■■□□□ 1.85
NUP50-218ENST00000493456 XPCQ01831 940 aaPredicted RBP26.57■■□□□ 1.84
NUP50-218ENST00000493456 ADGRF5Q8IZF2 1346 aa26.57■■□□□ 1.84
NUP50-218ENST00000493456 ANKRD30BQ9BXX2 1392 aa26.57■■□□□ 1.84
NUP50-218ENST00000493456 CCDC144AA2RUR9 1427 aa26.56■■□□□ 1.84
NUP50-218ENST00000493456 KIF1AQ12756 1690 aa26.56■■□□□ 1.84
NUP50-218ENST00000493456 ABCC11Q96J66 1382 aa26.55■■□□□ 1.84
NUP50-218ENST00000493456 IFT172Q9UG01 1749 aa26.54■■□□□ 1.84
NUP50-218ENST00000493456 SLIT2O94813 1529 aa26.54■■□□□ 1.84
NUP50-218ENST00000493456 WAPLQ7Z5K2 1190 aa26.53■■□□□ 1.84
NUP50-218ENST00000493456 STK26Q9P289 416 aa26.53■■□□□ 1.84
NUP50-218ENST00000493456 SPATA31E1Q6ZUB1 1445 aa26.53■■□□□ 1.84
NUP50-218ENST00000493456 FMN2Q9NZ56 1722 aa26.53■■□□□ 1.84
NUP50-218ENST00000493456 UNC5CLQ8IV45 518 aa26.52■■□□□ 1.84
NUP50-218ENST00000493456 RALGAPBQ86X10 1494 aa26.51■■□□□ 1.83
NUP50-218ENST00000493456 PIK3C2GO75747 1445 aa26.51■■□□□ 1.83
NUP50-218ENST00000493456 SPATA31A3Q5VYP0 1347 aa26.51■■□□□ 1.83
NUP50-218ENST00000493456 NUTM2FA1L443 756 aa26.51■■□□□ 1.83
NUP50-218ENST00000493456 USP32Q8NFA0 1604 aa26.5■■□□□ 1.83
NUP50-218ENST00000493456 GLI3P10071 1580 aa26.5■■□□□ 1.83
NUP50-218ENST00000493456 PLEKHH1Q9ULM0 1364 aa26.49■■□□□ 1.83
NUP50-218ENST00000493456 BLMP54132 1417 aaPredicted RBP26.48■■□□□ 1.83
NUP50-218ENST00000493456 RGL3Q3MIN7 710 aa26.48■■□□□ 1.83
NUP50-218ENST00000493456 YTHDC2Q9H6S0 1430 aaKnown RBP26.47■■□□□ 1.83
NUP50-218ENST00000493456 TMEM132EQ6IEE7 984 aa26.45■■□□□ 1.82
NUP50-218ENST00000493456 KRT28Q7Z3Y7 464 aa26.44■■□□□ 1.82
NUP50-218ENST00000493456 SIRT1Q96EB6 747 aa26.44■■□□□ 1.82
NUP50-218ENST00000493456 TNS3Q68CZ2 1445 aa26.44■■□□□ 1.82
NUP50-218ENST00000493456 HAP1P54257 671 aaPredicted RBP26.4■■□□□ 1.82
NUP50-218ENST00000493456 PSME1Q06323 249 aa26.4■■□□□ 1.82
NUP50-218ENST00000493456 NWD2Q9ULI1 1742 aa26.39■■□□□ 1.82
NUP50-218ENST00000493456 PHF8Q9UPP1 1060 aa26.39■■□□□ 1.82
NUP50-218ENST00000493456 BRWD3Q6RI45 1802 aa26.39■■□□□ 1.81
NUP50-218ENST00000493456 SBNO1A3KN83 1393 aa26.38■■□□□ 1.81
NUP50-218ENST00000493456 VPS72Q15906 364 aa26.38■■□□□ 1.81
NUP50-218ENST00000493456 MPHOSPH9Q99550 1183 aa26.38■■□□□ 1.81
NUP50-218ENST00000493456 PLCH1Q4KWH8 1693 aa26.38■■□□□ 1.81
NUP50-218ENST00000493456 NRXN1Q9ULB1 1477 aa26.37■■□□□ 1.81
NUP50-218ENST00000493456 SF3B2Q13435 895 aaKnown RBP26.37■■□□□ 1.81
NUP50-218ENST00000493456 ARHGEF10O15013 1369 aa26.36■■□□□ 1.81
NUP50-218ENST00000493456 SEPT12Q8IYM1 358 aa26.36■■□□□ 1.81
NUP50-218ENST00000493456 ABCA3Q99758 1704 aa26.35■■□□□ 1.81
NUP50-218ENST00000493456 C14orf93Q9H972 538 aaKnown RBP26.35■■□□□ 1.81
NUP50-218ENST00000493456 RGPD8O14715 1765 aaPredicted RBP26.35■■□□□ 1.81
NUP50-218ENST00000493456 DHX57Q6P158 1386 aaKnown RBP26.34■■□□□ 1.81
NUP50-218ENST00000493456 ONECUT3O60422 494 aaPredicted RBP26.33■■□□□ 1.81
NUP50-218ENST00000493456 DEFB132Q7Z7B7 95 aa26.32■■□□□ 1.8
NUP50-218ENST00000493456 CABLES1Q8TDN4 633 aa26.31■■□□□ 1.8
NUP50-218ENST00000493456 ANKARQ7Z5J8 1434 aa26.31■■□□□ 1.8
NUP50-218ENST00000493456 KRT27Q7Z3Y8 459 aa26.3■■□□□ 1.8
NUP50-218ENST00000493456 CCDC9Q9Y3X0 531 aaKnown RBP26.3■■□□□ 1.8
NUP50-218ENST00000493456 ACIN1Q9UKV3 1341 aaKnown RBP26.29■■□□□ 1.8
NUP50-218ENST00000493456 DLC1Q96QB1 1528 aa26.29■■□□□ 1.8
NUP50-218ENST00000493456 LMOD2Q6P5Q4 547 aa26.28■■□□□ 1.8
NUP50-218ENST00000493456 PRAM1Q96QH2 718 aa26.28■■□□□ 1.8
NUP50-218ENST00000493456 ADGRB2O60241 1585 aa26.28■■□□□ 1.8
NUP50-218ENST00000493456 LRP5O75197 1615 aa26.28■■□□□ 1.8
NUP50-218ENST00000493456 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
NUP50-218ENST00000493456 NRAPQ86VF7 1730 aa26.25■■□□□ 1.79
NUP50-218ENST00000493456 PLEKHG5O94827 1062 aa26.24■■□□□ 1.79
NUP50-218ENST00000493456 SAFB2Q14151 953 aaKnown RBP eCLIP26.24■■□□□ 1.79
NUP50-218ENST00000493456 FAM83GA6ND36 823 aa26.23■■□□□ 1.79
NUP50-218ENST00000493456 POGKQ9P215 609 aa26.22■■□□□ 1.79
NUP50-218ENST00000493456 TRPM3Q9HCF6 1732 aaPredicted RBP26.22■■□□□ 1.79
NUP50-218ENST00000493456 BAG6P46379 1132 aa26.21■■□□□ 1.79
NUP50-218ENST00000493456 PMFBP1Q8TBY8 1022 aa26.21■■□□□ 1.79
NUP50-218ENST00000493456 EIF3AQ14152 1382 aaKnown RBP26.2■■□□□ 1.79
NUP50-218ENST00000493456 A0A0G2JS52 829 aa26.2■■□□□ 1.78
NUP50-218ENST00000493456 MYT1Q01538 1121 aa26.2■■□□□ 1.78
NUP50-218ENST00000493456 COL14A1Q05707 1796 aaKnown RBP26.2■■□□□ 1.78
NUP50-218ENST00000493456 ALS2Q96Q42 1657 aa26.19■■□□□ 1.78
NUP50-218ENST00000493456 ADGRB1O14514 1584 aa26.18■■□□□ 1.78
NUP50-218ENST00000493456 BTG4Q9NY30 223 aa26.18■■□□□ 1.78
NUP50-218ENST00000493456 GPRASP1Q5JY77 1395 aa26.18■■□□□ 1.78
NUP50-218ENST00000493456 FAM98CQ17RN3 349 aaKnown RBP26.17■■□□□ 1.78
NUP50-218ENST00000493456 TULP4Q9NRJ4 1543 aa26.15■■□□□ 1.78
NUP50-218ENST00000493456 RGPD1P0DJD0 1748 aa26.14■■□□□ 1.78
NUP50-218ENST00000493456 HIRIP3Q9BW71 556 aaPredicted RBP26.11■■□□□ 1.77
NUP50-218ENST00000493456 SPATA31A5Q5VU36 1347 aa26.11■■□□□ 1.77
NUP50-218ENST00000493456 SPATA31A7Q8IWB4 1347 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms