RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 SAFB2Q14151 953 aaKnown RBP eCLIP24.04■■□□□ 1.44
RER1-208ENST00000493207 POGKQ9P215 609 aa24.04■■□□□ 1.44
RER1-208ENST00000493207 DCCP43146 1447 aa24.02■■□□□ 1.44
RER1-208ENST00000493207 ATF3P18847 181 aa24.02■■□□□ 1.44
RER1-208ENST00000493207 PIP4K2BP78356 416 aa24.01■■□□□ 1.43
RER1-208ENST00000493207 CADPS2Q86UW7 1296 aa24.01■■□□□ 1.43
RER1-208ENST00000493207 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
RER1-208ENST00000493207 GPRASP1Q5JY77 1395 aa24.01■■□□□ 1.43
RER1-208ENST00000493207 CDC42BPGQ6DT37 1551 aa23.99■■□□□ 1.43
RER1-208ENST00000493207 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
RER1-208ENST00000493207 SLAIN2Q9P270 581 aa23.97■■□□□ 1.43
RER1-208ENST00000493207 QRICH2Q9H0J4 1663 aa23.96■■□□□ 1.43
RER1-208ENST00000493207 ROBO1Q9Y6N7 1651 aa23.95■■□□□ 1.43
RER1-208ENST00000493207 ADGRB2O60241 1585 aa23.95■■□□□ 1.43
RER1-208ENST00000493207 MINK1Q8N4C8 1332 aaPredicted RBP23.95■■□□□ 1.42
RER1-208ENST00000493207 MST1RQ04912 1400 aa23.94■■□□□ 1.42
RER1-208ENST00000493207 FMN2Q9NZ56 1722 aa23.94■■□□□ 1.42
RER1-208ENST00000493207 HIRIP3Q9BW71 556 aaPredicted RBP23.94■■□□□ 1.42
RER1-208ENST00000493207 EIF3AQ14152 1382 aaKnown RBP23.93■■□□□ 1.42
RER1-208ENST00000493207 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
RER1-208ENST00000493207 ILDR1Q86SU0 546 aaPredicted RBP23.93■■□□□ 1.42
RER1-208ENST00000493207 C1orf167Q5SNV9 1468 aa23.89■■□□□ 1.42
RER1-208ENST00000493207 NUTM2FA1L443 756 aa23.88■■□□□ 1.41
RER1-208ENST00000493207 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
RER1-208ENST00000493207 USP32Q8NFA0 1604 aa23.84■■□□□ 1.41
RER1-208ENST00000493207 WASLO00401 505 aaPredicted RBP23.84■■□□□ 1.41
RER1-208ENST00000493207 BRINP3Q76B58 766 aa23.84■■□□□ 1.41
RER1-208ENST00000493207 USP47Q96K76 1375 aa23.82■■□□□ 1.4
RER1-208ENST00000493207 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
RER1-208ENST00000493207 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
RER1-208ENST00000493207 PHLPP1O60346 1717 aa23.81■■□□□ 1.4
RER1-208ENST00000493207 HSPA1LP34931 641 aa23.8■■□□□ 1.4
RER1-208ENST00000493207 ESCO1Q5FWF5 840 aa23.8■■□□□ 1.4
RER1-208ENST00000493207 CDK19Q9BWU1 502 aa23.8■■□□□ 1.4
RER1-208ENST00000493207 ANKARQ7Z5J8 1434 aa23.79■■□□□ 1.4
RER1-208ENST00000493207 NHSL1Q5SYE7 1610 aa23.79■■□□□ 1.4
RER1-208ENST00000493207 ST20-MTHFSA0A0A6YYL1 179 aa23.78■■□□□ 1.4
RER1-208ENST00000493207 ITSN1Q15811 1721 aa23.78■■□□□ 1.4
RER1-208ENST00000493207 AHDC1Q5TGY3 1603 aaPredicted RBP23.77■■□□□ 1.4
RER1-208ENST00000493207 KIF1AQ12756 1690 aa23.77■■□□□ 1.4
RER1-208ENST00000493207 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
RER1-208ENST00000493207 EVC2Q86UK5 1308 aa23.76■■□□□ 1.39
RER1-208ENST00000493207 PRR36Q9H6K5 1346 aa23.76■■□□□ 1.39
RER1-208ENST00000493207 ATP7BP35670 1465 aa23.75■■□□□ 1.39
RER1-208ENST00000493207 SRPK2P78362 688 aaKnown RBP23.75■■□□□ 1.39
RER1-208ENST00000493207 TOPAZ1Q8N9V7 1692 aa23.74■■□□□ 1.39
RER1-208ENST00000493207 DDX17Q92841 729 aaKnown RBP23.74■■□□□ 1.39
RER1-208ENST00000493207 CABP2Q9NPB3 220 aa23.74■■□□□ 1.39
RER1-208ENST00000493207 NUDT16Q96DE0 195 aaKnown RBP23.73■■□□□ 1.39
RER1-208ENST00000493207 COL16A1Q07092 1604 aaPredicted RBP23.73■■□□□ 1.39
RER1-208ENST00000493207 TESK2Q96S53 571 aa23.72■■□□□ 1.39
RER1-208ENST00000493207 PHF8Q9UPP1 1060 aa23.71■■□□□ 1.39
RER1-208ENST00000493207 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
RER1-208ENST00000493207 FOXO3O43524 673 aa23.68■■□□□ 1.38
RER1-208ENST00000493207 EIF4G2P78344 907 aaKnown RBP eCLIP23.68■■□□□ 1.38
RER1-208ENST00000493207 NPHP3Q7Z494 1330 aa23.67■■□□□ 1.38
RER1-208ENST00000493207 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
RER1-208ENST00000493207 CCDC61Q9Y6R9 512 aa23.66■■□□□ 1.38
RER1-208ENST00000493207 PPIP5K1Q6PFW1 1433 aa23.66■■□□□ 1.38
RER1-208ENST00000493207 PXDNQ92626 1479 aa23.65■■□□□ 1.38
RER1-208ENST00000493207 XPCQ01831 940 aaPredicted RBP23.65■■□□□ 1.38
RER1-208ENST00000493207 SLC24A1O60721 1099 aa23.64■■□□□ 1.37
RER1-208ENST00000493207 DISP3Q9P2K9 1392 aa23.64■■□□□ 1.37
RER1-208ENST00000493207 SOS2Q07890 1332 aaPredicted RBP23.63■■□□□ 1.37
RER1-208ENST00000493207 TMF1P82094 1093 aa23.62■■□□□ 1.37
RER1-208ENST00000493207 NGDNQ8NEJ9 315 aaKnown RBP23.62■■□□□ 1.37
RER1-208ENST00000493207 ATAD2Q6PL18 1390 aa23.62■■□□□ 1.37
RER1-208ENST00000493207 PLEKHG3A1L390 1219 aa23.6■■□□□ 1.37
RER1-208ENST00000493207 PSME1Q06323 249 aa23.6■■□□□ 1.37
RER1-208ENST00000493207 KRT28Q7Z3Y7 464 aa23.6■■□□□ 1.37
RER1-208ENST00000493207 CABP1Q9NZU7 370 aa23.6■■□□□ 1.37
RER1-208ENST00000493207 SHPRHQ149N8 1683 aa23.6■■□□□ 1.37
RER1-208ENST00000493207 LRRC59Q96AG4 307 aaKnown RBP23.59■■□□□ 1.37
RER1-208ENST00000493207 TRPM3Q9HCF6 1732 aaPredicted RBP23.59■■□□□ 1.37
RER1-208ENST00000493207 ACEP12821 1306 aa23.59■■□□□ 1.37
RER1-208ENST00000493207 POLR3AO14802 1390 aaPredicted RBP23.58■■□□□ 1.37
RER1-208ENST00000493207 JCADQ9P266 1359 aa23.58■■□□□ 1.37
RER1-208ENST00000493207 PUS7Q96PZ0 661 aaKnown RBP23.57■■□□□ 1.36
RER1-208ENST00000493207 AKAP12Q02952 1782 aa23.56■■□□□ 1.36
RER1-208ENST00000493207 TMC1Q8TDI8 760 aa23.54■■□□□ 1.36
RER1-208ENST00000493207 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
RER1-208ENST00000493207 TNS3Q68CZ2 1445 aa23.53■■□□□ 1.36
RER1-208ENST00000493207 ZEB1P37275 1124 aaPredicted RBP23.53■■□□□ 1.36
RER1-208ENST00000493207 CDCA8Q53HL2 280 aa23.53■■□□□ 1.36
RER1-208ENST00000493207 SBNO1A3KN83 1393 aa23.52■■□□□ 1.36
RER1-208ENST00000493207 SPATA31A3Q5VYP0 1347 aa23.52■■□□□ 1.36
RER1-208ENST00000493207 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
RER1-208ENST00000493207 COL22A1Q8NFW1 1626 aaPredicted RBP23.51■■□□□ 1.35
RER1-208ENST00000493207 MYOM1P52179 1685 aa23.51■■□□□ 1.35
RER1-208ENST00000493207 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
RER1-208ENST00000493207 SLC12A5Q9H2X9 1139 aa23.5■■□□□ 1.35
RER1-208ENST00000493207 LMOD2Q6P5Q4 547 aa23.49■■□□□ 1.35
RER1-208ENST00000493207 MON2Q7Z3U7 1717 aa23.49■■□□□ 1.35
RER1-208ENST00000493207 NINLQ9Y2I6 1382 aa23.49■■□□□ 1.35
RER1-208ENST00000493207 USP6P35125 1406 aa23.49■■□□□ 1.35
RER1-208ENST00000493207 CD163L1Q9NR16 1453 aa23.49■■□□□ 1.35
RER1-208ENST00000493207 POLR3GLQ9BT43 218 aa23.48■■□□□ 1.35
RER1-208ENST00000493207 CPSF1Q10570 1443 aaKnown RBP23.48■■□□□ 1.35
RER1-208ENST00000493207 SPATA31A6Q5VVP1 1343 aa23.47■■□□□ 1.35
RER1-208ENST00000493207 NRKQ7Z2Y5 1582 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms