RNA–Protein interactions for RNA: ENST00000493039.5

CSTF1-206, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 2,234 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-206ENST00000493039 CPS1P31327 1500 aa13.18□□□□□ -0.3
CSTF1-206ENST00000493039 CENPJQ9HC77 1338 aaPredicted RBP13.18□□□□□ -0.3
CSTF1-206ENST00000493039 ARHGEF28Q8N1W1 1705 aaKnown RBP13.18□□□□□ -0.3
CSTF1-206ENST00000493039 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
CSTF1-206ENST00000493039 POGKQ9P215 609 aa13.17□□□□□ -0.3
CSTF1-206ENST00000493039 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
CSTF1-206ENST00000493039 EIF3AQ14152 1382 aaKnown RBP13.16□□□□□ -0.3
CSTF1-206ENST00000493039 SBNO2Q9Y2G9 1366 aa13.15□□□□□ -0.3
CSTF1-206ENST00000493039 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.31
CSTF1-206ENST00000493039 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.31
CSTF1-206ENST00000493039 NKTRP30414 1462 aaKnown RBP13.14□□□□□ -0.31
CSTF1-206ENST00000493039 DISP3Q9P2K9 1392 aa13.14□□□□□ -0.31
CSTF1-206ENST00000493039 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.13□□□□□ -0.31
CSTF1-206ENST00000493039 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
CSTF1-206ENST00000493039 LRRC7Q96NW7 1537 aa13.12□□□□□ -0.31
CSTF1-206ENST00000493039 LTBP4Q8N2S1 1624 aa13.12□□□□□ -0.31
CSTF1-206ENST00000493039 PLEKHG5O94827 1062 aa13.11□□□□□ -0.31
CSTF1-206ENST00000493039 WASHC2AQ641Q2 1341 aa13.11□□□□□ -0.31
CSTF1-206ENST00000493039 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
CSTF1-206ENST00000493039 TULP4Q9NRJ4 1543 aa13.1□□□□□ -0.31
CSTF1-206ENST00000493039 QRICH2Q9H0J4 1663 aa13.1□□□□□ -0.31
CSTF1-206ENST00000493039 KIF7Q2M1P5 1343 aa13.1□□□□□ -0.31
CSTF1-206ENST00000493039 WASLO00401 505 aaPredicted RBP13.09□□□□□ -0.31
CSTF1-206ENST00000493039 CDK19Q9BWU1 502 aa13.09□□□□□ -0.31
CSTF1-206ENST00000493039 TMF1P82094 1093 aa13.09□□□□□ -0.31
CSTF1-206ENST00000493039 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.31
CSTF1-206ENST00000493039 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.31
CSTF1-206ENST00000493039 CABP2Q9NPB3 220 aa13.08□□□□□ -0.32
CSTF1-206ENST00000493039 C19orf44Q9H6X5 657 aa13.08□□□□□ -0.32
CSTF1-206ENST00000493039 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
CSTF1-206ENST00000493039 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
CSTF1-206ENST00000493039 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
CSTF1-206ENST00000493039 CCDC7Q96M83 1385 aa13.07□□□□□ -0.32
CSTF1-206ENST00000493039 ADGRB2O60241 1585 aa13.06□□□□□ -0.32
CSTF1-206ENST00000493039 NALCNQ8IZF0 1738 aa13.06□□□□□ -0.32
CSTF1-206ENST00000493039 NUTM2FA1L443 756 aa13.05□□□□□ -0.32
CSTF1-206ENST00000493039 C14orf37Q86TY3 774 aa13.05□□□□□ -0.32
CSTF1-206ENST00000493039 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
CSTF1-206ENST00000493039 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
CSTF1-206ENST00000493039 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
CSTF1-206ENST00000493039 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
CSTF1-206ENST00000493039 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
CSTF1-206ENST00000493039 ATP7BP35670 1465 aa13.02□□□□□ -0.32
CSTF1-206ENST00000493039 POLR3GLQ9BT43 218 aa13.02□□□□□ -0.33
CSTF1-206ENST00000493039 CDCA8Q53HL2 280 aa13.01□□□□□ -0.33
CSTF1-206ENST00000493039 MSH6P52701 1360 aa13.01□□□□□ -0.33
CSTF1-206ENST00000493039 CABP1Q9NZU7 370 aa13.01□□□□□ -0.33
CSTF1-206ENST00000493039 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
CSTF1-206ENST00000493039 DCCP43146 1447 aa13.01□□□□□ -0.33
CSTF1-206ENST00000493039 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
CSTF1-206ENST00000493039 CADPS2Q86UW7 1296 aa13□□□□□ -0.33
CSTF1-206ENST00000493039 KLHL34Q8N239 644 aa13□□□□□ -0.33
CSTF1-206ENST00000493039 MST1RQ04912 1400 aa13□□□□□ -0.33
CSTF1-206ENST00000493039 ATF3P18847 181 aa13□□□□□ -0.33
CSTF1-206ENST00000493039 ORAI2Q96SN7 254 aa13□□□□□ -0.33
CSTF1-206ENST00000493039 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
CSTF1-206ENST00000493039 DDX10Q13206 875 aaKnown RBP12.99□□□□□ -0.33
CSTF1-206ENST00000493039 C1orf167Q5SNV9 1468 aa12.99□□□□□ -0.33
CSTF1-206ENST00000493039 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
CSTF1-206ENST00000493039 ANKARQ7Z5J8 1434 aa12.98□□□□□ -0.33
CSTF1-206ENST00000493039 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
CSTF1-206ENST00000493039 CERKQ8TCT0 537 aa12.98□□□□□ -0.33
CSTF1-206ENST00000493039 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
CSTF1-206ENST00000493039 SLAIN2Q9P270 581 aa12.98□□□□□ -0.33
CSTF1-206ENST00000493039 CD163L1Q9NR16 1453 aa12.97□□□□□ -0.33
CSTF1-206ENST00000493039 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
CSTF1-206ENST00000493039 PMFBP1Q8TBY8 1022 aa12.97□□□□□ -0.33
CSTF1-206ENST00000493039 CARD14Q9BXL6 1004 aa12.97□□□□□ -0.33
CSTF1-206ENST00000493039 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
CSTF1-206ENST00000493039 PANK3Q9H999 370 aa12.96□□□□□ -0.33
CSTF1-206ENST00000493039 MYOM1P52179 1685 aa12.96□□□□□ -0.33
CSTF1-206ENST00000493039 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.34
CSTF1-206ENST00000493039 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
CSTF1-206ENST00000493039 ACEP12821 1306 aa12.95□□□□□ -0.34
CSTF1-206ENST00000493039 CPSF1Q10570 1443 aaKnown RBP12.95□□□□□ -0.34
CSTF1-206ENST00000493039 BRINP3Q76B58 766 aa12.94□□□□□ -0.34
CSTF1-206ENST00000493039 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
CSTF1-206ENST00000493039 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
CSTF1-206ENST00000493039 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
CSTF1-206ENST00000493039 POLR3AO14802 1390 aaPredicted RBP12.93□□□□□ -0.34
CSTF1-206ENST00000493039 NINLQ9Y2I6 1382 aa12.93□□□□□ -0.34
CSTF1-206ENST00000493039 DDX17Q92841 729 aaKnown RBP12.93□□□□□ -0.34
CSTF1-206ENST00000493039 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
CSTF1-206ENST00000493039 FOXO3O43524 673 aa12.92□□□□□ -0.34
CSTF1-206ENST00000493039 IQSEC2Q5JU85 1478 aa12.92□□□□□ -0.34
CSTF1-206ENST00000493039 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
CSTF1-206ENST00000493039 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
CSTF1-206ENST00000493039 SSH2Q76I76 1423 aa12.9□□□□□ -0.34
CSTF1-206ENST00000493039 UBAP1LF5GYI3 381 aa12.9□□□□□ -0.34
CSTF1-206ENST00000493039 TOM1O60784 492 aa12.89□□□□□ -0.35
CSTF1-206ENST00000493039 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-206ENST00000493039 XPCQ01831 940 aaPredicted RBP12.89□□□□□ -0.35
CSTF1-206ENST00000493039 KTN1Q86UP2 1357 aaKnown RBP12.89□□□□□ -0.35
CSTF1-206ENST00000493039 AMER1Q5JTC6 1135 aaPredicted RBP12.88□□□□□ -0.35
CSTF1-206ENST00000493039 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
CSTF1-206ENST00000493039 USP6P35125 1406 aa12.88□□□□□ -0.35
CSTF1-206ENST00000493039 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
CSTF1-206ENST00000493039 ITSN1Q15811 1721 aa12.87□□□□□ -0.35
CSTF1-206ENST00000493039 PIP4K2BP78356 416 aa12.86□□□□□ -0.35
CSTF1-206ENST00000493039 PSME1Q06323 249 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms