RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 AEBP2Q6ZN18 517 aaPredicted RBP16.54■□□□□ 0.24
TRIM11-204ENST00000493030 UBTFL1P0CB47 393 aaPredicted RBP16.54■□□□□ 0.24
TRIM11-204ENST00000493030 ANKRD20A12PQ8NF67 263 aa16.54■□□□□ 0.24
TRIM11-204ENST00000493030 MIA2Q96PC5 1412 aa16.54■□□□□ 0.24
TRIM11-204ENST00000493030 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
TRIM11-204ENST00000493030 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
TRIM11-204ENST00000493030 CCDC43Q96MW1 224 aaKnown RBP16.53■□□□□ 0.24
TRIM11-204ENST00000493030 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
TRIM11-204ENST00000493030 IGF1RP08069 1367 aa16.52■□□□□ 0.24
TRIM11-204ENST00000493030 FAM177BA6PVY3 158 aa16.52■□□□□ 0.24
TRIM11-204ENST00000493030 HOOK1Q9UJC3 728 aaKnown RBP16.52■□□□□ 0.24
TRIM11-204ENST00000493030 MTHFSP49914 203 aa16.52■□□□□ 0.23
TRIM11-204ENST00000493030 CC2D2AQ9P2K1 1620 aa16.52■□□□□ 0.23
TRIM11-204ENST00000493030 CHMP5Q9NZZ3 219 aa16.52■□□□□ 0.23
TRIM11-204ENST00000493030 CCDC70Q6NSX1 233 aa16.51■□□□□ 0.23
TRIM11-204ENST00000493030 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
TRIM11-204ENST00000493030 MTMR7Q9Y216 660 aa16.51■□□□□ 0.23
TRIM11-204ENST00000493030 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
TRIM11-204ENST00000493030 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
TRIM11-204ENST00000493030 CWC22Q9HCG8 908 aaKnown RBP16.51■□□□□ 0.23
TRIM11-204ENST00000493030 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
TRIM11-204ENST00000493030 AFAP1Q8N556 730 aa16.5■□□□□ 0.23
TRIM11-204ENST00000493030 ANKRD50Q9ULJ7 1429 aa16.5■□□□□ 0.23
TRIM11-204ENST00000493030 ADAMTS8Q9UP79 889 aa16.5■□□□□ 0.23
TRIM11-204ENST00000493030 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
TRIM11-204ENST00000493030 C22orf23Q9BZE7 217 aa16.49■□□□□ 0.23
TRIM11-204ENST00000493030 CFAP70Q5T0N1 1121 aa16.49■□□□□ 0.23
TRIM11-204ENST00000493030 HOMER1Q86YM7 354 aa16.49■□□□□ 0.23
TRIM11-204ENST00000493030 STAC3Q96MF2 364 aa16.49■□□□□ 0.23
TRIM11-204ENST00000493030 KDM4AO75164 1064 aa16.49■□□□□ 0.23
TRIM11-204ENST00000493030 SASS6Q6UVJ0 657 aa16.48■□□□□ 0.23
TRIM11-204ENST00000493030 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
TRIM11-204ENST00000493030 CCDC73Q6ZRK6 1079 aa16.47■□□□□ 0.23
TRIM11-204ENST00000493030 FSD1Q9BTV5 496 aa16.47■□□□□ 0.23
TRIM11-204ENST00000493030 PHF23Q9BUL5 403 aaPredicted RBP16.47■□□□□ 0.23
TRIM11-204ENST00000493030 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
TRIM11-204ENST00000493030 TCP11L2Q8N4U5 519 aa16.47■□□□□ 0.23
TRIM11-204ENST00000493030 AQRO60306 1485 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■■■■■ 36.5
TRIM11-204ENST00000493030 NUCB2P80303 420 aa16.46■□□□□ 0.23
TRIM11-204ENST00000493030 GPRASP1Q5JY77 1395 aa16.46■□□□□ 0.23
TRIM11-204ENST00000493030 SURF6O75683 361 aaKnown RBP16.46■□□□□ 0.23
TRIM11-204ENST00000493030 TXNDC2Q86VQ3 553 aa16.46■□□□□ 0.23
TRIM11-204ENST00000493030 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
TRIM11-204ENST00000493030 CDC45O75419 566 aa16.46■□□□□ 0.23
TRIM11-204ENST00000493030 CNKSR2Q8WXI2 1034 aa16.45■□□□□ 0.22
TRIM11-204ENST00000493030 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
TRIM11-204ENST00000493030 GPS2Q13227 327 aa16.45■□□□□ 0.22
TRIM11-204ENST00000493030 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
TRIM11-204ENST00000493030 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
TRIM11-204ENST00000493030 DNAJC2Q99543 621 aaKnown RBP16.45■□□□□ 0.22
TRIM11-204ENST00000493030 STRN4Q9NRL3 753 aa16.45■□□□□ 0.22
TRIM11-204ENST00000493030 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
TRIM11-204ENST00000493030 CNTROBQ8N137 903 aa16.44■□□□□ 0.22
TRIM11-204ENST00000493030 GAS2L2Q8NHY3 880 aa16.44■□□□□ 0.22
TRIM11-204ENST00000493030 CUX1P39880 1505 aa16.43■□□□□ 0.22
TRIM11-204ENST00000493030 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
TRIM11-204ENST00000493030 CNTLNQ9NXG0 1405 aa16.43■□□□□ 0.22
TRIM11-204ENST00000493030 NINLQ9Y2I6 1382 aa16.43■□□□□ 0.22
TRIM11-204ENST00000493030 PROSER2Q86WR7 435 aaPredicted RBP16.43■□□□□ 0.22
TRIM11-204ENST00000493030 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
TRIM11-204ENST00000493030 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
TRIM11-204ENST00000493030 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
TRIM11-204ENST00000493030 ARHGAP5Q13017 1502 aa16.42■□□□□ 0.22
TRIM11-204ENST00000493030 GNAI3P08754 354 aa16.42■□□□□ 0.22
TRIM11-204ENST00000493030 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
TRIM11-204ENST00000493030 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
TRIM11-204ENST00000493030 TBC1D2BQ9UPU7 963 aa16.42■□□□□ 0.22
TRIM11-204ENST00000493030 EXOSC9Q06265 439 aaKnown RBP16.41■□□□□ 0.22
TRIM11-204ENST00000493030 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
TRIM11-204ENST00000493030 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
TRIM11-204ENST00000493030 C1orf115Q9H7X2 142 aa16.41■□□□□ 0.22
TRIM11-204ENST00000493030 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
TRIM11-204ENST00000493030 PSMA5P28066 241 aa16.4■□□□□ 0.22
TRIM11-204ENST00000493030 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
TRIM11-204ENST00000493030 SYNJ1O43426 1573 aa16.4■□□□□ 0.22
TRIM11-204ENST00000493030 XBP1P17861 261 aa16.4■□□□□ 0.22
TRIM11-204ENST00000493030 PPP2R1AP30153 589 aa16.4■□□□□ 0.22
TRIM11-204ENST00000493030 ATP2B1P20020 1258 aa16.4■□□□□ 0.22
TRIM11-204ENST00000493030 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
TRIM11-204ENST00000493030 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.22
TRIM11-204ENST00000493030 SDF4Q9BRK5 362 aa16.39■□□□□ 0.21
TRIM11-204ENST00000493030 CT47A1Q5JQC4 288 aaPredicted RBP16.39■□□□□ 0.21
TRIM11-204ENST00000493030 AAMPQ13685 434 aa16.39■□□□□ 0.21
TRIM11-204ENST00000493030 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.39■□□□□ 0.21
TRIM11-204ENST00000493030 SART3Q15020 963 aaKnown RBP16.38■□□□□ 0.21
TRIM11-204ENST00000493030 IFT57Q9NWB7 429 aa16.38■□□□□ 0.21
TRIM11-204ENST00000493030 NCOA2Q15596 1464 aa16.38■□□□□ 0.21
TRIM11-204ENST00000493030 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
TRIM11-204ENST00000493030 RRBP1Q9P2E9 1410 aaKnown RBP16.38■□□□□ 0.21
TRIM11-204ENST00000493030 NBPF1Q3BBV0 1214 aa16.38■□□□□ 0.21
TRIM11-204ENST00000493030 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
TRIM11-204ENST00000493030 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
TRIM11-204ENST00000493030 TSR2Q969E8 191 aaKnown RBP16.37■□□□□ 0.21
TRIM11-204ENST00000493030 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
TRIM11-204ENST00000493030 FANCIQ9NVI1 1328 aa16.37■□□□□ 0.21
TRIM11-204ENST00000493030 BCL11BQ9C0K0 894 aaPredicted RBP16.37■□□□□ 0.21
TRIM11-204ENST00000493030 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
TRIM11-204ENST00000493030 SLC12A5Q9H2X9 1139 aa16.37■□□□□ 0.21
TRIM11-204ENST00000493030 TOP2BQ02880 1626 aa16.36■□□□□ 0.21
TRIM11-204ENST00000493030 EPS15P42566 896 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms