RNA–Protein interactions for RNA: ENST00000492778.5

CRAMP1-207, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-207ENST00000492778 NALCNQ8IZF0 1738 aa12.97□□□□□ -0.33
CRAMP1-207ENST00000492778 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
CRAMP1-207ENST00000492778 ADAMTS2O95450 1211 aa12.97□□□□□ -0.33
CRAMP1-207ENST00000492778 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
CRAMP1-207ENST00000492778 AHDC1Q5TGY3 1603 aaPredicted RBP12.97□□□□□ -0.33
CRAMP1-207ENST00000492778 EP400Q96L91 3159 aa12.97□□□□□ -0.33
CRAMP1-207ENST00000492778 LRPPRCP42704 1394 aaKnown RBP12.96□□□□□ -0.33
CRAMP1-207ENST00000492778 C8orf37Q96NL8 207 aa12.96□□□□□ -0.33
CRAMP1-207ENST00000492778 C14orf93Q9H972 538 aaKnown RBP12.96□□□□□ -0.33
CRAMP1-207ENST00000492778 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
CRAMP1-207ENST00000492778 FOXO3O43524 673 aa12.95□□□□□ -0.34
CRAMP1-207ENST00000492778 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
CRAMP1-207ENST00000492778 ZNF772Q68DY9 489 aaPredicted RBP12.94□□□□□ -0.34
CRAMP1-207ENST00000492778 PRAM1Q96QH2 718 aa12.94□□□□□ -0.34
CRAMP1-207ENST00000492778 POGKQ9P215 609 aa12.94□□□□□ -0.34
CRAMP1-207ENST00000492778 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
CRAMP1-207ENST00000492778 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
CRAMP1-207ENST00000492778 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
CRAMP1-207ENST00000492778 HIRIP3Q9BW71 556 aaPredicted RBP12.92□□□□□ -0.34
CRAMP1-207ENST00000492778 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
CRAMP1-207ENST00000492778 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
CRAMP1-207ENST00000492778 AFF2P51816 1311 aa12.91□□□□□ -0.34
CRAMP1-207ENST00000492778 RGS12O14924 1447 aa12.91□□□□□ -0.34
CRAMP1-207ENST00000492778 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
CRAMP1-207ENST00000492778 SOS2Q07890 1332 aaPredicted RBP12.89□□□□□ -0.35
CRAMP1-207ENST00000492778 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
CRAMP1-207ENST00000492778 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
CRAMP1-207ENST00000492778 HRCP23327 699 aa12.89□□□□□ -0.35
CRAMP1-207ENST00000492778 RXRBP28702 533 aa12.89□□□□□ -0.35
CRAMP1-207ENST00000492778 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
CRAMP1-207ENST00000492778 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
CRAMP1-207ENST00000492778 TECPR2O15040 1411 aa12.88□□□□□ -0.35
CRAMP1-207ENST00000492778 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
CRAMP1-207ENST00000492778 NHSL1Q5SYE7 1610 aa12.88□□□□□ -0.35
CRAMP1-207ENST00000492778 PMFBP1Q8TBY8 1022 aa12.88□□□□□ -0.35
CRAMP1-207ENST00000492778 MYOM2P54296 1465 aa12.88□□□□□ -0.35
CRAMP1-207ENST00000492778 NRXN1Q9ULB1 1477 aa12.87□□□□□ -0.35
CRAMP1-207ENST00000492778 QTRT2Q9H974 415 aaKnown RBP12.87□□□□□ -0.35
CRAMP1-207ENST00000492778 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
CRAMP1-207ENST00000492778 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
CRAMP1-207ENST00000492778 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
CRAMP1-207ENST00000492778 HAP1P54257 671 aaPredicted RBP12.85□□□□□ -0.35
CRAMP1-207ENST00000492778 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
CRAMP1-207ENST00000492778 SIRT1Q96EB6 747 aa12.85□□□□□ -0.35
CRAMP1-207ENST00000492778 PSME1Q06323 249 aa12.84□□□□□ -0.35
CRAMP1-207ENST00000492778 USP21Q9UK80 565 aa12.84□□□□□ -0.35
CRAMP1-207ENST00000492778 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
CRAMP1-207ENST00000492778 SIN3AQ96ST3 1273 aa12.83□□□□□ -0.36
CRAMP1-207ENST00000492778 PXDNQ92626 1479 aa12.82□□□□□ -0.36
CRAMP1-207ENST00000492778 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
CRAMP1-207ENST00000492778 KNDC1Q76NI1 1749 aa12.81□□□□□ -0.36
CRAMP1-207ENST00000492778 LRP5O75197 1615 aa12.8□□□□□ -0.36
CRAMP1-207ENST00000492778 RBM6P78332 1123 aaKnown RBP12.8□□□□□ -0.36
CRAMP1-207ENST00000492778 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
CRAMP1-207ENST00000492778 ADGRB1O14514 1584 aa12.8□□□□□ -0.36
CRAMP1-207ENST00000492778 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
CRAMP1-207ENST00000492778 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
CRAMP1-207ENST00000492778 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
CRAMP1-207ENST00000492778 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
CRAMP1-207ENST00000492778 LAMC1P11047 1609 aa12.79□□□□□ -0.36
CRAMP1-207ENST00000492778 STAC3Q96MF2 364 aa12.78□□□□□ -0.36
CRAMP1-207ENST00000492778 PCGF6Q9BYE7 350 aa12.78□□□□□ -0.36
CRAMP1-207ENST00000492778 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
CRAMP1-207ENST00000492778 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
CRAMP1-207ENST00000492778 PRR36Q9H6K5 1346 aa12.78□□□□□ -0.36
CRAMP1-207ENST00000492778 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
CRAMP1-207ENST00000492778 TRIM26Q12899 539 aaPredicted RBP12.77□□□□□ -0.37
CRAMP1-207ENST00000492778 L3MBTL2Q969R5 705 aa12.77□□□□□ -0.37
CRAMP1-207ENST00000492778 DLC1Q96QB1 1528 aa12.77□□□□□ -0.37
CRAMP1-207ENST00000492778 FNBP4Q8N3X1 1017 aaPredicted RBP12.76□□□□□ -0.37
CRAMP1-207ENST00000492778 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
CRAMP1-207ENST00000492778 CCDC9Q9Y3X0 531 aaKnown RBP12.76□□□□□ -0.37
CRAMP1-207ENST00000492778 NUTM2GQ5VZR2 741 aa12.75□□□□□ -0.37
CRAMP1-207ENST00000492778 TNS3Q68CZ2 1445 aa12.75□□□□□ -0.37
CRAMP1-207ENST00000492778 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
CRAMP1-207ENST00000492778 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
CRAMP1-207ENST00000492778 ANKARQ7Z5J8 1434 aa12.73□□□□□ -0.37
CRAMP1-207ENST00000492778 SRPK2P78362 688 aaKnown RBP12.73□□□□□ -0.37
CRAMP1-207ENST00000492778 RGPD8O14715 1765 aaPredicted RBP12.73□□□□□ -0.37
CRAMP1-207ENST00000492778 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
CRAMP1-207ENST00000492778 EIF3AQ14152 1382 aaKnown RBP12.72□□□□□ -0.37
CRAMP1-207ENST00000492778 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
CRAMP1-207ENST00000492778 GJD4Q96KN9 370 aaPredicted RBP12.72□□□□□ -0.37
CRAMP1-207ENST00000492778 CABP2Q9NPB3 220 aa12.72□□□□□ -0.37
CRAMP1-207ENST00000492778 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
CRAMP1-207ENST00000492778 BCL9LQ86UU0 1499 aa12.72□□□□□ -0.37
CRAMP1-207ENST00000492778 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
CRAMP1-207ENST00000492778 USP32Q8NFA0 1604 aa12.71□□□□□ -0.37
CRAMP1-207ENST00000492778 A0A0G2JS52 829 aa12.71□□□□□ -0.37
CRAMP1-207ENST00000492778 MYT1Q01538 1121 aa12.71□□□□□ -0.37
CRAMP1-207ENST00000492778 TULP4Q9NRJ4 1543 aa12.71□□□□□ -0.38
CRAMP1-207ENST00000492778 ATRNO75882 1429 aa12.71□□□□□ -0.38
CRAMP1-207ENST00000492778 ARHGEF10O15013 1369 aa12.7□□□□□ -0.38
CRAMP1-207ENST00000492778 CENPJQ9HC77 1338 aaPredicted RBP12.7□□□□□ -0.38
CRAMP1-207ENST00000492778 FAM83GA6ND36 823 aa12.7□□□□□ -0.38
CRAMP1-207ENST00000492778 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
CRAMP1-207ENST00000492778 ACEP12821 1306 aa12.68□□□□□ -0.38
CRAMP1-207ENST00000492778 BTG4Q9NY30 223 aa12.68□□□□□ -0.38
CRAMP1-207ENST00000492778 CCDC61Q9Y6R9 512 aa12.68□□□□□ -0.38
CRAMP1-207ENST00000492778 ROCK2O75116 1388 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms