RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 ORAI2Q96SN7 254 aa22.09■■□□□ 1.13
CDC42SE1-205ENST00000491825 SOS2Q07890 1332 aaPredicted RBP22.08■■□□□ 1.13
CDC42SE1-205ENST00000491825 LRPPRCP42704 1394 aaKnown RBP22.07■■□□□ 1.12
CDC42SE1-205ENST00000491825 ABCC11Q96J66 1382 aa22.05■■□□□ 1.12
CDC42SE1-205ENST00000491825 AFF2P51816 1311 aa22.05■■□□□ 1.12
CDC42SE1-205ENST00000491825 PCGF6Q9BYE7 350 aa22.04■■□□□ 1.12
CDC42SE1-205ENST00000491825 CDK12Q9NYV4 1490 aaPredicted RBP22.03■■□□□ 1.12
CDC42SE1-205ENST00000491825 NRXN1Q9ULB1 1477 aa22.03■■□□□ 1.12
CDC42SE1-205ENST00000491825 KNDC1Q76NI1 1749 aa22.02■■□□□ 1.12
CDC42SE1-205ENST00000491825 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
CDC42SE1-205ENST00000491825 TMEM132EQ6IEE7 984 aa22■■□□□ 1.11
CDC42SE1-205ENST00000491825 WAPLQ7Z5K2 1190 aa22■■□□□ 1.11
CDC42SE1-205ENST00000491825 STK26Q9P289 416 aa22■■□□□ 1.11
CDC42SE1-205ENST00000491825 MYOM2P54296 1465 aa22■■□□□ 1.11
CDC42SE1-205ENST00000491825 YTHDC2Q9H6S0 1430 aaKnown RBP21.99■■□□□ 1.11
CDC42SE1-205ENST00000491825 PXDNQ92626 1479 aa21.99■■□□□ 1.11
CDC42SE1-205ENST00000491825 RXRBP28702 533 aa21.99■■□□□ 1.11
CDC42SE1-205ENST00000491825 C8orf37Q96NL8 207 aa21.98■■□□□ 1.11
CDC42SE1-205ENST00000491825 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
CDC42SE1-205ENST00000491825 COL22A1Q8NFW1 1626 aaPredicted RBP21.97■■□□□ 1.11
CDC42SE1-205ENST00000491825 ESCO1Q5FWF5 840 aa21.96■■□□□ 1.11
CDC42SE1-205ENST00000491825 C14orf93Q9H972 538 aaKnown RBP21.96■■□□□ 1.11
CDC42SE1-205ENST00000491825 NPHP3Q7Z494 1330 aa21.96■■□□□ 1.11
CDC42SE1-205ENST00000491825 ADAMTS2O95450 1211 aa21.94■■□□□ 1.1
CDC42SE1-205ENST00000491825 UPF1Q92900 1129 aaKnown RBP eCLIP21.94■■□□□ 1.1
CDC42SE1-205ENST00000491825 RGS12O14924 1447 aa21.94■■□□□ 1.1
CDC42SE1-205ENST00000491825 SIRT1Q96EB6 747 aa21.93■■□□□ 1.1
CDC42SE1-205ENST00000491825 FMN2Q9NZ56 1722 aa21.92■■□□□ 1.1
CDC42SE1-205ENST00000491825 FOXO3O43524 673 aa21.91■■□□□ 1.1
CDC42SE1-205ENST00000491825 CFAP70Q5T0N1 1121 aa21.91■■□□□ 1.1
CDC42SE1-205ENST00000491825 QTRT2Q9H974 415 aaKnown RBP21.91■■□□□ 1.1
CDC42SE1-205ENST00000491825 NUTM2FA1L443 756 aa21.9■■□□□ 1.1
CDC42SE1-205ENST00000491825 RBM6P78332 1123 aaKnown RBP21.9■■□□□ 1.1
CDC42SE1-205ENST00000491825 NGLY1Q96IV0 654 aa21.9■■□□□ 1.1
CDC42SE1-205ENST00000491825 XPCQ01831 940 aaPredicted RBP21.89■■□□□ 1.09
CDC42SE1-205ENST00000491825 FNBP4Q8N3X1 1017 aaPredicted RBP21.89■■□□□ 1.09
CDC42SE1-205ENST00000491825 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
CDC42SE1-205ENST00000491825 DLC1Q96QB1 1528 aa21.86■■□□□ 1.09
CDC42SE1-205ENST00000491825 KIF1AQ12756 1690 aa21.85■■□□□ 1.09
CDC42SE1-205ENST00000491825 USP21Q9UK80 565 aa21.85■■□□□ 1.09
CDC42SE1-205ENST00000491825 ATRNO75882 1429 aa21.84■■□□□ 1.09
CDC42SE1-205ENST00000491825 PRAM1Q96QH2 718 aa21.83■■□□□ 1.09
CDC42SE1-205ENST00000491825 BCL9LQ86UU0 1499 aa21.83■■□□□ 1.08
CDC42SE1-205ENST00000491825 SPATA31A3Q5VYP0 1347 aa21.82■■□□□ 1.08
CDC42SE1-205ENST00000491825 TRPC5Q9UL62 973 aaPredicted RBP21.81■■□□□ 1.08
CDC42SE1-205ENST00000491825 ADGRB2O60241 1585 aa21.81■■□□□ 1.08
CDC42SE1-205ENST00000491825 SAFB2Q14151 953 aaKnown RBP eCLIP21.78■■□□□ 1.08
CDC42SE1-205ENST00000491825 PHF8Q9UPP1 1060 aa21.78■■□□□ 1.08
CDC42SE1-205ENST00000491825 TNS3Q68CZ2 1445 aa21.78■■□□□ 1.08
CDC42SE1-205ENST00000491825 ANKARQ7Z5J8 1434 aa21.78■■□□□ 1.08
CDC42SE1-205ENST00000491825 KRT28Q7Z3Y7 464 aa21.77■■□□□ 1.08
CDC42SE1-205ENST00000491825 MARF1Q9Y4F3 1742 aaKnown RBP21.77■■□□□ 1.08
CDC42SE1-205ENST00000491825 USP32Q8NFA0 1604 aa21.77■■□□□ 1.07
CDC42SE1-205ENST00000491825 SLIT2O94813 1529 aa21.76■■□□□ 1.07
CDC42SE1-205ENST00000491825 CLSPNQ9HAW4 1339 aa21.76■■□□□ 1.07
CDC42SE1-205ENST00000491825 SBNO1A3KN83 1393 aa21.74■■□□□ 1.07
CDC42SE1-205ENST00000491825 DCAF11Q8TEB1 546 aa21.74■■□□□ 1.07
CDC42SE1-205ENST00000491825 STAC3Q96MF2 364 aa21.74■■□□□ 1.07
CDC42SE1-205ENST00000491825 POGKQ9P215 609 aa21.74■■□□□ 1.07
CDC42SE1-205ENST00000491825 TRAK1Q9UPV9 953 aa21.73■■□□□ 1.07
CDC42SE1-205ENST00000491825 RGPD8O14715 1765 aaPredicted RBP21.73■■□□□ 1.07
CDC42SE1-205ENST00000491825 KDM2AQ9Y2K7 1162 aa21.72■■□□□ 1.07
CDC42SE1-205ENST00000491825 ATAD2Q6PL18 1390 aa21.72■■□□□ 1.07
CDC42SE1-205ENST00000491825 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.72■■□□□ 1.07
CDC42SE1-205ENST00000491825 EP400Q96L91 3159 aa21.71■■□□□ 1.07
CDC42SE1-205ENST00000491825 PSME1Q06323 249 aa21.7■■□□□ 1.06
CDC42SE1-205ENST00000491825 PRR36Q9H6K5 1346 aa21.7■■□□□ 1.06
CDC42SE1-205ENST00000491825 UNC5CLQ8IV45 518 aa21.69■■□□□ 1.06
CDC42SE1-205ENST00000491825 GJD4Q96KN9 370 aaPredicted RBP21.69■■□□□ 1.06
CDC42SE1-205ENST00000491825 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
CDC42SE1-205ENST00000491825 TULP4Q9NRJ4 1543 aa21.69■■□□□ 1.06
CDC42SE1-205ENST00000491825 PMFBP1Q8TBY8 1022 aa21.68■■□□□ 1.06
CDC42SE1-205ENST00000491825 ARHGEF10O15013 1369 aa21.68■■□□□ 1.06
CDC42SE1-205ENST00000491825 RALGAPBQ86X10 1494 aa21.68■■□□□ 1.06
CDC42SE1-205ENST00000491825 GLI3P10071 1580 aa21.68■■□□□ 1.06
CDC42SE1-205ENST00000491825 EIF3AQ14152 1382 aaKnown RBP21.67■■□□□ 1.06
CDC42SE1-205ENST00000491825 MINK1Q8N4C8 1332 aaPredicted RBP21.67■■□□□ 1.06
CDC42SE1-205ENST00000491825 CABLES1Q8TDN4 633 aa21.67■■□□□ 1.06
CDC42SE1-205ENST00000491825 SIN3AQ96ST3 1273 aa21.67■■□□□ 1.06
CDC42SE1-205ENST00000491825 ABCA3Q99758 1704 aa21.66■■□□□ 1.06
CDC42SE1-205ENST00000491825 TRPM3Q9HCF6 1732 aaPredicted RBP21.66■■□□□ 1.06
CDC42SE1-205ENST00000491825 WASLO00401 505 aaPredicted RBP21.65■■□□□ 1.06
CDC42SE1-205ENST00000491825 ARHGEF28Q8N1W1 1705 aaKnown RBP21.63■■□□□ 1.05
CDC42SE1-205ENST00000491825 ATP7BP35670 1465 aa21.62■■□□□ 1.05
CDC42SE1-205ENST00000491825 ALS2Q96Q42 1657 aa21.61■■□□□ 1.05
CDC42SE1-205ENST00000491825 PLCH1Q4KWH8 1693 aa21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 HAP1P54257 671 aaPredicted RBP21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 NEUROD1Q13562 356 aa21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 VPS72Q15906 364 aa21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 LMOD2Q6P5Q4 547 aa21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 CCER1Q8TC90 406 aaPredicted RBP21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 GPRASP1Q5JY77 1395 aa21.6■■□□□ 1.05
CDC42SE1-205ENST00000491825 SRCAPQ6ZRS2 3230 aa21.59■■□□□ 1.05
CDC42SE1-205ENST00000491825 NWD2Q9ULI1 1742 aa21.59■■□□□ 1.05
CDC42SE1-205ENST00000491825 KIAA1210Q9ULL0 1709 aa21.59■■□□□ 1.05
CDC42SE1-205ENST00000491825 TONSLQ96HA7 1378 aa21.58■■□□□ 1.04
CDC42SE1-205ENST00000491825 FAM83GA6ND36 823 aa21.57■■□□□ 1.04
CDC42SE1-205ENST00000491825 PLEKHG5O94827 1062 aa21.57■■□□□ 1.04
CDC42SE1-205ENST00000491825 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
CDC42SE1-205ENST00000491825 CRYBG1Q9Y4K1 1723 aa21.55■■□□□ 1.04
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