RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 C1orf167Q5SNV9 1468 aa23.16■■□□□ 1.3
PFDN6-207ENST00000491382 PLEKHH1Q9ULM0 1364 aa23.15■■□□□ 1.3
PFDN6-207ENST00000491382 SIN3AQ96ST3 1273 aa23.15■■□□□ 1.3
PFDN6-207ENST00000491382 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
PFDN6-207ENST00000491382 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
PFDN6-207ENST00000491382 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
PFDN6-207ENST00000491382 FMN2Q9NZ56 1722 aa23.11■■□□□ 1.29
PFDN6-207ENST00000491382 POGKQ9P215 609 aa23.11■■□□□ 1.29
PFDN6-207ENST00000491382 L3MBTL2Q969R5 705 aa23.1■■□□□ 1.29
PFDN6-207ENST00000491382 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
PFDN6-207ENST00000491382 JCADQ9P266 1359 aa23.1■■□□□ 1.29
PFDN6-207ENST00000491382 ARHGEF28Q8N1W1 1705 aaKnown RBP23.09■■□□□ 1.29
PFDN6-207ENST00000491382 SHPRHQ149N8 1683 aa23.07■■□□□ 1.28
PFDN6-207ENST00000491382 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
PFDN6-207ENST00000491382 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
PFDN6-207ENST00000491382 ORAI2Q96SN7 254 aa23.05■■□□□ 1.28
PFDN6-207ENST00000491382 ESCO1Q5FWF5 840 aa23.04■■□□□ 1.28
PFDN6-207ENST00000491382 PHF23Q9BUL5 403 aaPredicted RBP23.03■■□□□ 1.28
PFDN6-207ENST00000491382 KIF1AQ12756 1690 aa23.03■■□□□ 1.28
PFDN6-207ENST00000491382 TRPM1Q7Z4N2 1603 aa23.02■■□□□ 1.28
PFDN6-207ENST00000491382 NUTM2FA1L443 756 aa23.02■■□□□ 1.28
PFDN6-207ENST00000491382 TONSLQ96HA7 1378 aa23.01■■□□□ 1.27
PFDN6-207ENST00000491382 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
PFDN6-207ENST00000491382 SPATA31A6Q5VVP1 1343 aa23.01■■□□□ 1.27
PFDN6-207ENST00000491382 RGPD8O14715 1765 aaPredicted RBP23■■□□□ 1.27
PFDN6-207ENST00000491382 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
PFDN6-207ENST00000491382 NBPF1Q3BBV0 1214 aa22.99■■□□□ 1.27
PFDN6-207ENST00000491382 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
PFDN6-207ENST00000491382 NPHP3Q7Z494 1330 aa22.99■■□□□ 1.27
PFDN6-207ENST00000491382 EIF3AQ14152 1382 aaKnown RBP22.99■■□□□ 1.27
PFDN6-207ENST00000491382 MINK1Q8N4C8 1332 aaPredicted RBP22.98■■□□□ 1.27
PFDN6-207ENST00000491382 ANKARQ7Z5J8 1434 aa22.98■■□□□ 1.27
PFDN6-207ENST00000491382 SOS2Q07890 1332 aaPredicted RBP22.97■■□□□ 1.27
PFDN6-207ENST00000491382 ILDR2Q71H61 639 aa22.96■■□□□ 1.27
PFDN6-207ENST00000491382 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
PFDN6-207ENST00000491382 USP32Q8NFA0 1604 aa22.94■■□□□ 1.26
PFDN6-207ENST00000491382 TULP4Q9NRJ4 1543 aa22.94■■□□□ 1.26
PFDN6-207ENST00000491382 ROCK2O75116 1388 aaKnown RBP22.93■■□□□ 1.26
PFDN6-207ENST00000491382 FOXO3O43524 673 aa22.93■■□□□ 1.26
PFDN6-207ENST00000491382 PXDNQ92626 1479 aa22.92■■□□□ 1.26
PFDN6-207ENST00000491382 PNPLA6Q8IY17 1366 aa22.92■■□□□ 1.26
PFDN6-207ENST00000491382 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
PFDN6-207ENST00000491382 ITSN1Q15811 1721 aa22.91■■□□□ 1.26
PFDN6-207ENST00000491382 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
PFDN6-207ENST00000491382 QRICH2Q9H0J4 1663 aa22.9■■□□□ 1.26
PFDN6-207ENST00000491382 LRP6O75581 1613 aa22.9■■□□□ 1.26
PFDN6-207ENST00000491382 MEX3CQ5U5Q3 659 aaKnown RBP22.9■■□□□ 1.26
PFDN6-207ENST00000491382 CENPJQ9HC77 1338 aaPredicted RBP22.89■■□□□ 1.26
PFDN6-207ENST00000491382 CLSPNQ9HAW4 1339 aa22.87■■□□□ 1.25
PFDN6-207ENST00000491382 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
PFDN6-207ENST00000491382 NUTM2BA6NNL0 878 aaPredicted RBP22.87■■□□□ 1.25
PFDN6-207ENST00000491382 NUTM2EB1AL46 878 aaPredicted RBP22.87■■□□□ 1.25
PFDN6-207ENST00000491382 NBPF8Q3BBV2 869 aa22.87■■□□□ 1.25
PFDN6-207ENST00000491382 NUTM2AQ8IVF1 878 aaPredicted RBP22.87■■□□□ 1.25
PFDN6-207ENST00000491382 XPCQ01831 940 aaPredicted RBP22.86■■□□□ 1.25
PFDN6-207ENST00000491382 RALGAPBQ86X10 1494 aa22.85■■□□□ 1.25
PFDN6-207ENST00000491382 GPRASP1Q5JY77 1395 aa22.85■■□□□ 1.25
PFDN6-207ENST00000491382 ATP7BP35670 1465 aa22.85■■□□□ 1.25
PFDN6-207ENST00000491382 PRR36Q9H6K5 1346 aa22.84■■□□□ 1.25
PFDN6-207ENST00000491382 PSME1Q06323 249 aa22.84■■□□□ 1.25
PFDN6-207ENST00000491382 KRT28Q7Z3Y7 464 aa22.84■■□□□ 1.25
PFDN6-207ENST00000491382 PMFBP1Q8TBY8 1022 aa22.83■■□□□ 1.25
PFDN6-207ENST00000491382 CDK19Q9BWU1 502 aa22.83■■□□□ 1.25
PFDN6-207ENST00000491382 TOPAZ1Q8N9V7 1692 aa22.81■■□□□ 1.24
PFDN6-207ENST00000491382 NUDT16Q96DE0 195 aaKnown RBP22.81■■□□□ 1.24
PFDN6-207ENST00000491382 RGS17Q9UGC6 210 aaPredicted RBP22.81■■□□□ 1.24
PFDN6-207ENST00000491382 CARD11Q9BXL7 1154 aa22.8■■□□□ 1.24
PFDN6-207ENST00000491382 TNS3Q68CZ2 1445 aa22.8■■□□□ 1.24
PFDN6-207ENST00000491382 SPATA31A3Q5VYP0 1347 aa22.8■■□□□ 1.24
PFDN6-207ENST00000491382 SBNO1A3KN83 1393 aa22.78■■□□□ 1.24
PFDN6-207ENST00000491382 SRPK2P78362 688 aaKnown RBP22.78■■□□□ 1.24
PFDN6-207ENST00000491382 NGDNQ8NEJ9 315 aaKnown RBP22.78■■□□□ 1.24
PFDN6-207ENST00000491382 TIMELESSQ9UNS1 1208 aa22.77■■□□□ 1.24
PFDN6-207ENST00000491382 TRPM3Q9HCF6 1732 aaPredicted RBP22.77■■□□□ 1.23
PFDN6-207ENST00000491382 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
PFDN6-207ENST00000491382 CCDC61Q9Y6R9 512 aa22.76■■□□□ 1.23
PFDN6-207ENST00000491382 MARF1Q9Y4F3 1742 aaKnown RBP22.76■■□□□ 1.23
PFDN6-207ENST00000491382 ARHGEF10O15013 1369 aa22.76■■□□□ 1.23
PFDN6-207ENST00000491382 CCER1Q8TC90 406 aaPredicted RBP22.75■■□□□ 1.23
PFDN6-207ENST00000491382 EVC2Q86UK5 1308 aa22.75■■□□□ 1.23
PFDN6-207ENST00000491382 ADAMTS2O95450 1211 aa22.74■■□□□ 1.23
PFDN6-207ENST00000491382 C8orf37Q96NL8 207 aa22.74■■□□□ 1.23
PFDN6-207ENST00000491382 ALS2Q96Q42 1657 aa22.72■■□□□ 1.23
PFDN6-207ENST00000491382 SOCS7O14512 581 aa22.72■■□□□ 1.23
PFDN6-207ENST00000491382 LMOD2Q6P5Q4 547 aa22.72■■□□□ 1.23
PFDN6-207ENST00000491382 SBNO2Q9Y2G9 1366 aa22.72■■□□□ 1.23
PFDN6-207ENST00000491382 POTEAQ6S8J7 498 aa22.71■■□□□ 1.23
PFDN6-207ENST00000491382 CABP2Q9NPB3 220 aa22.71■■□□□ 1.23
PFDN6-207ENST00000491382 AFF2P51816 1311 aa22.71■■□□□ 1.23
PFDN6-207ENST00000491382 POLR3AO14802 1390 aaPredicted RBP22.71■■□□□ 1.23
PFDN6-207ENST00000491382 PPIP5K1Q6PFW1 1433 aa22.71■■□□□ 1.23
PFDN6-207ENST00000491382 NGLY1Q96IV0 654 aa22.7■■□□□ 1.22
PFDN6-207ENST00000491382 ABCA3Q99758 1704 aa22.7■■□□□ 1.22
PFDN6-207ENST00000491382 PLEKHG3A1L390 1219 aa22.69■■□□□ 1.22
PFDN6-207ENST00000491382 HAP1P54257 671 aaPredicted RBP22.69■■□□□ 1.22
PFDN6-207ENST00000491382 ACEP12821 1306 aa22.68■■□□□ 1.22
PFDN6-207ENST00000491382 PAK3O75914 559 aaPredicted RBP22.67■■□□□ 1.22
PFDN6-207ENST00000491382 ATAD2Q6PL18 1390 aa22.64■■□□□ 1.22
PFDN6-207ENST00000491382 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
PFDN6-207ENST00000491382 CABLES1Q8TDN4 633 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms