RNA–Protein interactions for RNA: ENST00000491294.1

ARPC1B-220, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 1,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-220ENST00000491294 SHPRHQ149N8 1683 aa26.02■■□□□ 1.76
ARPC1B-220ENST00000491294 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
ARPC1B-220ENST00000491294 POTEAQ6S8J7 498 aa26■■□□□ 1.75
ARPC1B-220ENST00000491294 MEX3CQ5U5Q3 659 aaKnown RBP25.99■■□□□ 1.75
ARPC1B-220ENST00000491294 LRP6O75581 1613 aa25.99■■□□□ 1.75
ARPC1B-220ENST00000491294 PLEKHH1Q9ULM0 1364 aa25.98■■□□□ 1.75
ARPC1B-220ENST00000491294 KNDC1Q76NI1 1749 aa25.98■■□□□ 1.75
ARPC1B-220ENST00000491294 STAC3Q96MF2 364 aa25.98■■□□□ 1.75
ARPC1B-220ENST00000491294 CDC42BPGQ6DT37 1551 aa25.98■■□□□ 1.75
ARPC1B-220ENST00000491294 DCAF11Q8TEB1 546 aa25.97■■□□□ 1.75
ARPC1B-220ENST00000491294 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
ARPC1B-220ENST00000491294 LAMC1P11047 1609 aa25.96■■□□□ 1.75
ARPC1B-220ENST00000491294 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.75
ARPC1B-220ENST00000491294 NUTM2BA6NNL0 878 aaPredicted RBP25.95■■□□□ 1.74
ARPC1B-220ENST00000491294 NUTM2EB1AL46 878 aaPredicted RBP25.95■■□□□ 1.74
ARPC1B-220ENST00000491294 ESCO1Q5FWF5 840 aa25.95■■□□□ 1.74
ARPC1B-220ENST00000491294 NUTM2AQ8IVF1 878 aaPredicted RBP25.95■■□□□ 1.74
ARPC1B-220ENST00000491294 PNPLA6Q8IY17 1366 aa25.92■■□□□ 1.74
ARPC1B-220ENST00000491294 ZNF772Q68DY9 489 aaPredicted RBP25.9■■□□□ 1.74
ARPC1B-220ENST00000491294 NPHP3Q7Z494 1330 aa25.89■■□□□ 1.74
ARPC1B-220ENST00000491294 NUTM2FA1L443 756 aa25.89■■□□□ 1.74
ARPC1B-220ENST00000491294 PRAM1Q96QH2 718 aa25.89■■□□□ 1.74
ARPC1B-220ENST00000491294 POGKQ9P215 609 aa25.87■■□□□ 1.73
ARPC1B-220ENST00000491294 FOXO3O43524 673 aa25.86■■□□□ 1.73
ARPC1B-220ENST00000491294 DLC1Q96QB1 1528 aa25.86■■□□□ 1.73
ARPC1B-220ENST00000491294 ADGRB1O14514 1584 aa25.86■■□□□ 1.73
ARPC1B-220ENST00000491294 SAFB2Q14151 953 aaKnown RBP eCLIP25.85■■□□□ 1.73
ARPC1B-220ENST00000491294 TRAK1Q9UPV9 953 aa25.83■■□□□ 1.73
ARPC1B-220ENST00000491294 FMN2Q9NZ56 1722 aa25.82■■□□□ 1.72
ARPC1B-220ENST00000491294 PXDNQ92626 1479 aa25.8■■□□□ 1.72
ARPC1B-220ENST00000491294 AFF2P51816 1311 aa25.8■■□□□ 1.72
ARPC1B-220ENST00000491294 XPCQ01831 940 aaPredicted RBP25.79■■□□□ 1.72
ARPC1B-220ENST00000491294 C8orf37Q96NL8 207 aa25.79■■□□□ 1.72
ARPC1B-220ENST00000491294 ADAMTS2O95450 1211 aa25.77■■□□□ 1.72
ARPC1B-220ENST00000491294 PHF8Q9UPP1 1060 aa25.77■■□□□ 1.72
ARPC1B-220ENST00000491294 RXRBP28702 533 aa25.75■■□□□ 1.71
ARPC1B-220ENST00000491294 NGLY1Q96IV0 654 aa25.75■■□□□ 1.71
ARPC1B-220ENST00000491294 KRT28Q7Z3Y7 464 aa25.74■■□□□ 1.71
ARPC1B-220ENST00000491294 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
ARPC1B-220ENST00000491294 COL22A1Q8NFW1 1626 aaPredicted RBP25.73■■□□□ 1.71
ARPC1B-220ENST00000491294 MINK1Q8N4C8 1332 aaPredicted RBP25.72■■□□□ 1.71
ARPC1B-220ENST00000491294 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
ARPC1B-220ENST00000491294 ANKARQ7Z5J8 1434 aa25.71■■□□□ 1.71
ARPC1B-220ENST00000491294 ADGRB2O60241 1585 aa25.71■■□□□ 1.71
ARPC1B-220ENST00000491294 PSME1Q06323 249 aa25.71■■□□□ 1.71
ARPC1B-220ENST00000491294 SPATA31A3Q5VYP0 1347 aa25.7■■□□□ 1.71
ARPC1B-220ENST00000491294 QTRT2Q9H974 415 aaKnown RBP25.7■■□□□ 1.7
ARPC1B-220ENST00000491294 WASLO00401 505 aaPredicted RBP25.69■■□□□ 1.7
ARPC1B-220ENST00000491294 RGPD8O14715 1765 aaPredicted RBP25.69■■□□□ 1.7
ARPC1B-220ENST00000491294 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
ARPC1B-220ENST00000491294 FNBP4Q8N3X1 1017 aaPredicted RBP25.67■■□□□ 1.7
ARPC1B-220ENST00000491294 RBM6P78332 1123 aaKnown RBP25.66■■□□□ 1.7
ARPC1B-220ENST00000491294 PMFBP1Q8TBY8 1022 aa25.66■■□□□ 1.7
ARPC1B-220ENST00000491294 USP21Q9UK80 565 aa25.65■■□□□ 1.7
ARPC1B-220ENST00000491294 KIAA1210Q9ULL0 1709 aa25.64■■□□□ 1.7
ARPC1B-220ENST00000491294 NBPF1Q3BBV0 1214 aa25.64■■□□□ 1.7
ARPC1B-220ENST00000491294 SIN3AQ96ST3 1273 aa25.64■■□□□ 1.7
ARPC1B-220ENST00000491294 SBNO1A3KN83 1393 aa25.64■■□□□ 1.69
ARPC1B-220ENST00000491294 CDK12Q9NYV4 1490 aaPredicted RBP25.64■■□□□ 1.69
ARPC1B-220ENST00000491294 PRR36Q9H6K5 1346 aa25.63■■□□□ 1.69
ARPC1B-220ENST00000491294 USP32Q8NFA0 1604 aa25.63■■□□□ 1.69
ARPC1B-220ENST00000491294 L3MBTL2Q969R5 705 aa25.63■■□□□ 1.69
ARPC1B-220ENST00000491294 TNS3Q68CZ2 1445 aa25.63■■□□□ 1.69
ARPC1B-220ENST00000491294 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
ARPC1B-220ENST00000491294 TULP4Q9NRJ4 1543 aa25.62■■□□□ 1.69
ARPC1B-220ENST00000491294 TRPC5Q9UL62 973 aaPredicted RBP25.61■■□□□ 1.69
ARPC1B-220ENST00000491294 NEUROD1Q13562 356 aa25.59■■□□□ 1.69
ARPC1B-220ENST00000491294 LMOD2Q6P5Q4 547 aa25.58■■□□□ 1.69
ARPC1B-220ENST00000491294 ARHGEF10O15013 1369 aa25.57■■□□□ 1.68
ARPC1B-220ENST00000491294 GPRASP1Q5JY77 1395 aa25.57■■□□□ 1.68
ARPC1B-220ENST00000491294 NUDT16Q96DE0 195 aaKnown RBP25.57■■□□□ 1.68
ARPC1B-220ENST00000491294 HAP1P54257 671 aaPredicted RBP25.56■■□□□ 1.68
ARPC1B-220ENST00000491294 NGDNQ8NEJ9 315 aaKnown RBP25.56■■□□□ 1.68
ARPC1B-220ENST00000491294 CDK19Q9BWU1 502 aa25.56■■□□□ 1.68
ARPC1B-220ENST00000491294 MARF1Q9Y4F3 1742 aaKnown RBP25.54■■□□□ 1.68
ARPC1B-220ENST00000491294 ATRNO75882 1429 aa25.54■■□□□ 1.68
ARPC1B-220ENST00000491294 BCL9LQ86UU0 1499 aa25.53■■□□□ 1.68
ARPC1B-220ENST00000491294 CABLES1Q8TDN4 633 aa25.53■■□□□ 1.68
ARPC1B-220ENST00000491294 RGS12O14924 1447 aa25.52■■□□□ 1.68
ARPC1B-220ENST00000491294 ATP7BP35670 1465 aa25.52■■□□□ 1.68
ARPC1B-220ENST00000491294 TRIM26Q12899 539 aaPredicted RBP25.51■■□□□ 1.67
ARPC1B-220ENST00000491294 UPF1Q92900 1129 aaKnown RBP eCLIP25.51■■□□□ 1.67
ARPC1B-220ENST00000491294 CENPJQ9HC77 1338 aaPredicted RBP25.51■■□□□ 1.67
ARPC1B-220ENST00000491294 PLEKHG5O94827 1062 aa25.5■■□□□ 1.67
ARPC1B-220ENST00000491294 UNC5CLQ8IV45 518 aa25.5■■□□□ 1.67
ARPC1B-220ENST00000491294 CCDC61Q9Y6R9 512 aa25.49■■□□□ 1.67
ARPC1B-220ENST00000491294 SLIT2O94813 1529 aa25.48■■□□□ 1.67
ARPC1B-220ENST00000491294 TRPM3Q9HCF6 1732 aaPredicted RBP25.47■■□□□ 1.67
ARPC1B-220ENST00000491294 PAK3O75914 559 aaPredicted RBP25.46■■□□□ 1.67
ARPC1B-220ENST00000491294 GJD4Q96KN9 370 aaPredicted RBP25.46■■□□□ 1.67
ARPC1B-220ENST00000491294 ITSN1Q15811 1721 aa25.46■■□□□ 1.67
ARPC1B-220ENST00000491294 PLEKHG3A1L390 1219 aa25.45■■□□□ 1.66
ARPC1B-220ENST00000491294 SRPK2P78362 688 aaKnown RBP25.44■■□□□ 1.66
ARPC1B-220ENST00000491294 ACEP12821 1306 aa25.43■■□□□ 1.66
ARPC1B-220ENST00000491294 POLR3AO14802 1390 aaPredicted RBP25.43■■□□□ 1.66
ARPC1B-220ENST00000491294 ROCK2O75116 1388 aaKnown RBP25.43■■□□□ 1.66
ARPC1B-220ENST00000491294 ALS2Q96Q42 1657 aa25.42■■□□□ 1.66
ARPC1B-220ENST00000491294 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
ARPC1B-220ENST00000491294 TRPM1Q7Z4N2 1603 aa25.41■■□□□ 1.66
ARPC1B-220ENST00000491294 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms