RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
USP34-218ENST00000490552 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
USP34-218ENST00000490552 PRKRIP1Q9H875 184 aaPredicted RBP12.93□□□□□ -0.34
USP34-218ENST00000490552 PANK3Q9H999 370 aa12.93□□□□□ -0.34
USP34-218ENST00000490552 AMOTL2Q9Y2J4 779 aa12.93□□□□□ -0.34
USP34-218ENST00000490552 PER1O15534 1290 aaPredicted RBP12.92□□□□□ -0.34
USP34-218ENST00000490552 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
USP34-218ENST00000490552 SAFB2Q14151 953 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP34-218ENST00000490552 RALBP1Q15311 655 aa12.92□□□□□ -0.34
USP34-218ENST00000490552 KNSTRNQ9Y448 316 aa12.92□□□□□ -0.34
USP34-218ENST00000490552 MINK1Q8N4C8 1332 aaPredicted RBP12.91□□□□□ -0.34
USP34-218ENST00000490552 ROBO2Q9HCK4 1378 aa12.91□□□□□ -0.34
USP34-218ENST00000490552 WAPLQ7Z5K2 1190 aa12.91□□□□□ -0.34
USP34-218ENST00000490552 NPC1L1Q9UHC9 1359 aa12.9□□□□□ -0.34
USP34-218ENST00000490552 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
USP34-218ENST00000490552 MYOM1P52179 1685 aa12.9□□□□□ -0.34
USP34-218ENST00000490552 XRN1Q8IZH2 1706 aaKnown RBP12.9□□□□□ -0.34
USP34-218ENST00000490552 CDK19Q9BWU1 502 aa12.89□□□□□ -0.35
USP34-218ENST00000490552 ADGRB2O60241 1585 aa12.89□□□□□ -0.35
USP34-218ENST00000490552 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
USP34-218ENST00000490552 WASLO00401 505 aaPredicted RBP12.89□□□□□ -0.35
USP34-218ENST00000490552 TMC1Q8TDI8 760 aa12.88□□□□□ -0.35
USP34-218ENST00000490552 ANKRD36BQ8N2N9 1353 aa12.88□□□□□ -0.35
USP34-218ENST00000490552 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
USP34-218ENST00000490552 TERF2IPQ9NYB0 399 aa12.87□□□□□ -0.35
USP34-218ENST00000490552 LMTK3Q96Q04 1460 aa12.87□□□□□ -0.35
USP34-218ENST00000490552 MSH5O43196 834 aa12.86□□□□□ -0.35
USP34-218ENST00000490552 KCNA6P17658 529 aa12.86□□□□□ -0.35
USP34-218ENST00000490552 NCKAP5LQ9HCH0 1330 aa12.86□□□□□ -0.35
USP34-218ENST00000490552 CHD2O14647 1828 aaKnown RBP12.86□□□□□ -0.35
USP34-218ENST00000490552 PARD3Q8TEW0 1356 aa12.86□□□□□ -0.35
USP34-218ENST00000490552 SLC12A5Q9H2X9 1139 aa12.85□□□□□ -0.35
USP34-218ENST00000490552 HDGFL2Q7Z4V5 671 aaPredicted RBP12.84□□□□□ -0.35
USP34-218ENST00000490552 CCDC61Q9Y6R9 512 aa12.84□□□□□ -0.35
USP34-218ENST00000490552 MYBBP1AQ9BQG0 1328 aaKnown RBP12.84□□□□□ -0.35
USP34-218ENST00000490552 ATP7BP35670 1465 aa12.84□□□□□ -0.35
USP34-218ENST00000490552 AMER1Q5JTC6 1135 aaPredicted RBP12.84□□□□□ -0.35
USP34-218ENST00000490552 NSD2O96028 1365 aa12.84□□□□□ -0.35
USP34-218ENST00000490552 NWD1Q149M9 1564 aa12.83□□□□□ -0.36
USP34-218ENST00000490552 CGNL1Q0VF96 1302 aa12.83□□□□□ -0.36
USP34-218ENST00000490552 NKTRP30414 1462 aaKnown RBP12.83□□□□□ -0.36
USP34-218ENST00000490552 USP32Q8NFA0 1604 aa12.83□□□□□ -0.36
USP34-218ENST00000490552 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.82□□□□□ -0.36
USP34-218ENST00000490552 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
USP34-218ENST00000490552 NUDT16Q96DE0 195 aaKnown RBP12.81□□□□□ -0.36
USP34-218ENST00000490552 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
USP34-218ENST00000490552 BRD4O60885 1362 aaPredicted RBP12.81□□□□□ -0.36
USP34-218ENST00000490552 CC2D1BQ5T0F9 858 aaKnown RBP12.81□□□□□ -0.36
USP34-218ENST00000490552 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
USP34-218ENST00000490552 CARD14Q9BXL6 1004 aa12.81□□□□□ -0.36
USP34-218ENST00000490552 CABP1Q9NZU7 370 aa12.81□□□□□ -0.36
USP34-218ENST00000490552 PPIP5K1Q6PFW1 1433 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 NCOA3Q9Y6Q9 1424 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 HSPA2P54652 639 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 DMRT2Q9Y5R5 561 aa12.8□□□□□ -0.36
USP34-218ENST00000490552 CDC42BPGQ6DT37 1551 aa12.79□□□□□ -0.36
USP34-218ENST00000490552 ADGRL3Q9HAR2 1447 aa12.78□□□□□ -0.36
USP34-218ENST00000490552 PLEKHG3A1L390 1219 aa12.78□□□□□ -0.36
USP34-218ENST00000490552 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
USP34-218ENST00000490552 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
USP34-218ENST00000490552 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
USP34-218ENST00000490552 EDC4Q6P2E9 1401 aaKnown RBP12.76□□□□□ -0.37
USP34-218ENST00000490552 CENPBP07199 599 aaPredicted RBP12.76□□□□□ -0.37
USP34-218ENST00000490552 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
USP34-218ENST00000490552 PRR36Q9H6K5 1346 aa12.75□□□□□ -0.37
USP34-218ENST00000490552 TOPAZ1Q8N9V7 1692 aa12.75□□□□□ -0.37
USP34-218ENST00000490552 CNGB1Q14028 1251 aaPredicted RBP12.75□□□□□ -0.37
USP34-218ENST00000490552 C14orf37Q86TY3 774 aa12.75□□□□□ -0.37
USP34-218ENST00000490552 STRCQ7RTU9 1775 aa12.74□□□□□ -0.37
USP34-218ENST00000490552 MORC1Q86VD1 984 aa12.74□□□□□ -0.37
USP34-218ENST00000490552 FMN2Q9NZ56 1722 aa12.74□□□□□ -0.37
USP34-218ENST00000490552 C19orf44Q9H6X5 657 aa12.74□□□□□ -0.37
USP34-218ENST00000490552 DCCP43146 1447 aa12.73□□□□□ -0.37
USP34-218ENST00000490552 NALCNQ8IZF0 1738 aa12.73□□□□□ -0.37
USP34-218ENST00000490552 POLR3AO14802 1390 aaPredicted RBP12.73□□□□□ -0.37
USP34-218ENST00000490552 PPP2R1AP30153 589 aa12.73□□□□□ -0.37
USP34-218ENST00000490552 YTHDC1Q96MU7 727 aaKnown RBP12.72□□□□□ -0.37
USP34-218ENST00000490552 ACEP12821 1306 aa12.71□□□□□ -0.37
USP34-218ENST00000490552 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.37
USP34-218ENST00000490552 INSRP06213 1382 aa12.71□□□□□ -0.38
USP34-218ENST00000490552 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
USP34-218ENST00000490552 FYB1O15117 783 aa12.71□□□□□ -0.38
USP34-218ENST00000490552 CCDC184Q52MB2 194 aa12.71□□□□□ -0.38
USP34-218ENST00000490552 PNISRQ8TF01 805 aaKnown RBP12.71□□□□□ -0.38
USP34-218ENST00000490552 NGDNQ8NEJ9 315 aaKnown RBP12.7□□□□□ -0.38
USP34-218ENST00000490552 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
USP34-218ENST00000490552 SCAF1Q9H7N4 1312 aaKnown RBP12.7□□□□□ -0.38
USP34-218ENST00000490552 TMEM94Q12767 1356 aa12.7□□□□□ -0.38
USP34-218ENST00000490552 USP6P35125 1406 aa12.69□□□□□ -0.38
USP34-218ENST00000490552 ANKRD26Q9UPS8 1709 aa12.69□□□□□ -0.38
USP34-218ENST00000490552 NUTM2FA1L443 756 aa12.69□□□□□ -0.38
USP34-218ENST00000490552 ATF3P18847 181 aa12.69□□□□□ -0.38
USP34-218ENST00000490552 CADPS2Q86UW7 1296 aa12.69□□□□□ -0.38
USP34-218ENST00000490552 FAM9BQ8IZU0 186 aa12.69□□□□□ -0.38
USP34-218ENST00000490552 PHF8Q9UPP1 1060 aa12.68□□□□□ -0.38
USP34-218ENST00000490552 KIF20BQ96Q89 1820 aa12.68□□□□□ -0.38
USP34-218ENST00000490552 MSH6P52701 1360 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms