RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.03
RBM39-236ENST00000490484 WAPLQ7Z5K2 1190 aa15.21■□□□□ 0.03
RBM39-236ENST00000490484 CFAP70Q5T0N1 1121 aa15.2■□□□□ 0.02
RBM39-236ENST00000490484 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
RBM39-236ENST00000490484 C14orf93Q9H972 538 aaKnown RBP15.2■□□□□ 0.02
RBM39-236ENST00000490484 NUTM2BA6NNL0 878 aaPredicted RBP15.19■□□□□ 0.02
RBM39-236ENST00000490484 NUTM2EB1AL46 878 aaPredicted RBP15.19■□□□□ 0.02
RBM39-236ENST00000490484 POTEAQ6S8J7 498 aa15.19■□□□□ 0.02
RBM39-236ENST00000490484 NUTM2AQ8IVF1 878 aaPredicted RBP15.19■□□□□ 0.02
RBM39-236ENST00000490484 FMN2Q9NZ56 1722 aa15.18■□□□□ 0.02
RBM39-236ENST00000490484 PNPLA6Q8IY17 1366 aa15.18■□□□□ 0.02
RBM39-236ENST00000490484 ADGRB1O14514 1584 aa15.18■□□□□ 0.02
RBM39-236ENST00000490484 DHX57Q6P158 1386 aaKnown RBP15.17■□□□□ 0.02
RBM39-236ENST00000490484 LRRC59Q96AG4 307 aaKnown RBP15.17■□□□□ 0.02
RBM39-236ENST00000490484 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
RBM39-236ENST00000490484 ESCO1Q5FWF5 840 aa15.16■□□□□ 0.02
RBM39-236ENST00000490484 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
RBM39-236ENST00000490484 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
RBM39-236ENST00000490484 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
RBM39-236ENST00000490484 SOS2Q07890 1332 aaPredicted RBP15.15■□□□□ 0.02
RBM39-236ENST00000490484 KIF1AQ12756 1690 aa15.14■□□□□ 0.01
RBM39-236ENST00000490484 PRAM1Q96QH2 718 aa15.14■□□□□ 0.01
RBM39-236ENST00000490484 PXDNQ92626 1479 aa15.14■□□□□ 0.01
RBM39-236ENST00000490484 SAFB2Q14151 953 aaKnown RBP eCLIP15.13■□□□□ 0.01
RBM39-236ENST00000490484 NPHP3Q7Z494 1330 aa15.13■□□□□ 0.01
RBM39-236ENST00000490484 ADGRB2O60241 1585 aa15.12■□□□□ 0.01
RBM39-236ENST00000490484 XPCQ01831 940 aaPredicted RBP15.12■□□□□ 0.01
RBM39-236ENST00000490484 SIRT1Q96EB6 747 aa15.12■□□□□ 0.01
RBM39-236ENST00000490484 COL22A1Q8NFW1 1626 aaPredicted RBP15.12■□□□□ 0.01
RBM39-236ENST00000490484 ZNF772Q68DY9 489 aaPredicted RBP15.11■□□□□ 0.01
RBM39-236ENST00000490484 FOXO3O43524 673 aa15.1■□□□□ 0.01
RBM39-236ENST00000490484 C8orf37Q96NL8 207 aa15.1■□□□□ 0.01
RBM39-236ENST00000490484 POGKQ9P215 609 aa15.1■□□□□ 0.01
RBM39-236ENST00000490484 RGPD8O14715 1765 aaPredicted RBP15.1■□□□□ 0.01
RBM39-236ENST00000490484 AFF2P51816 1311 aa15.1■□□□□ 0.01
RBM39-236ENST00000490484 ADAMTS2O95450 1211 aa15.09■□□□□ 0.01
RBM39-236ENST00000490484 TRAK1Q9UPV9 953 aa15.09■□□□□ 0.01
RBM39-236ENST00000490484 ARHGEF28Q8N1W1 1705 aaKnown RBP15.09■□□□□ 0.01
RBM39-236ENST00000490484 USP32Q8NFA0 1604 aa15.08■□□□□ 0
RBM39-236ENST00000490484 STAC3Q96MF2 364 aa15.07■□□□□ 0
RBM39-236ENST00000490484 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
RBM39-236ENST00000490484 MINK1Q8N4C8 1332 aaPredicted RBP15.05■□□□□ -0
RBM39-236ENST00000490484 ANKARQ7Z5J8 1434 aa15.05■□□□□ -0
RBM39-236ENST00000490484 KIAA1210Q9ULL0 1709 aa15.05■□□□□ -0
RBM39-236ENST00000490484 PHF8Q9UPP1 1060 aa15.04■□□□□ -0
RBM39-236ENST00000490484 TULP4Q9NRJ4 1543 aa15.03■□□□□ -0
RBM39-236ENST00000490484 NGLY1Q96IV0 654 aa15.03■□□□□ -0
RBM39-236ENST00000490484 MARF1Q9Y4F3 1742 aaKnown RBP15.03■□□□□ -0
RBM39-236ENST00000490484 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
RBM39-236ENST00000490484 EIF3AQ14152 1382 aaKnown RBP15.02■□□□□ -0
RBM39-236ENST00000490484 RXRBP28702 533 aa15.02■□□□□ -0
RBM39-236ENST00000490484 SPATA31A3Q5VYP0 1347 aa15.01□□□□□ -0.01
RBM39-236ENST00000490484 KRT28Q7Z3Y7 464 aa15.01□□□□□ -0.01
RBM39-236ENST00000490484 CDK12Q9NYV4 1490 aaPredicted RBP15.01□□□□□ -0.01
RBM39-236ENST00000490484 ABCA3Q99758 1704 aa15□□□□□ -0.01
RBM39-236ENST00000490484 RGS12O14924 1447 aa15□□□□□ -0.01
RBM39-236ENST00000490484 PRR36Q9H6K5 1346 aa14.99□□□□□ -0.01
RBM39-236ENST00000490484 PMFBP1Q8TBY8 1022 aa14.99□□□□□ -0.01
RBM39-236ENST00000490484 USP21Q9UK80 565 aa14.99□□□□□ -0.01
RBM39-236ENST00000490484 ITSN1Q15811 1721 aa14.99□□□□□ -0.01
RBM39-236ENST00000490484 TRPM3Q9HCF6 1732 aaPredicted RBP14.98□□□□□ -0.01
RBM39-236ENST00000490484 ATP7BP35670 1465 aa14.98□□□□□ -0.01
RBM39-236ENST00000490484 WASLO00401 505 aaPredicted RBP14.98□□□□□ -0.01
RBM39-236ENST00000490484 QTRT2Q9H974 415 aaKnown RBP14.98□□□□□ -0.01
RBM39-236ENST00000490484 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
RBM39-236ENST00000490484 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
RBM39-236ENST00000490484 PSME1Q06323 249 aa14.97□□□□□ -0.01
RBM39-236ENST00000490484 NBPF1Q3BBV0 1214 aa14.97□□□□□ -0.01
RBM39-236ENST00000490484 SIN3AQ96ST3 1273 aa14.97□□□□□ -0.01
RBM39-236ENST00000490484 RBM6P78332 1123 aaKnown RBP14.96□□□□□ -0.01
RBM39-236ENST00000490484 LMOD2Q6P5Q4 547 aa14.96□□□□□ -0.01
RBM39-236ENST00000490484 FNBP4Q8N3X1 1017 aaPredicted RBP14.96□□□□□ -0.01
RBM39-236ENST00000490484 ARHGEF10O15013 1369 aa14.96□□□□□ -0.02
RBM39-236ENST00000490484 ATRNO75882 1429 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 HAP1P54257 671 aaPredicted RBP14.95□□□□□ -0.02
RBM39-236ENST00000490484 NEUROD1Q13562 356 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 TOPAZ1Q8N9V7 1692 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 QRICH2Q9H0J4 1663 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 GPRASP1Q5JY77 1395 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
RBM39-236ENST00000490484 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.95□□□□□ -0.02
RBM39-236ENST00000490484 ALS2Q96Q42 1657 aa14.94□□□□□ -0.02
RBM39-236ENST00000490484 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
RBM39-236ENST00000490484 TRPC5Q9UL62 973 aaPredicted RBP14.94□□□□□ -0.02
RBM39-236ENST00000490484 PLCH1Q4KWH8 1693 aa14.93□□□□□ -0.02
RBM39-236ENST00000490484 SLIT2O94813 1529 aa14.92□□□□□ -0.02
RBM39-236ENST00000490484 NGDNQ8NEJ9 315 aaKnown RBP14.92□□□□□ -0.02
RBM39-236ENST00000490484 NUDT16Q96DE0 195 aaKnown RBP14.91□□□□□ -0.02
RBM39-236ENST00000490484 CDK19Q9BWU1 502 aa14.91□□□□□ -0.02
RBM39-236ENST00000490484 CENPJQ9HC77 1338 aaPredicted RBP14.91□□□□□ -0.02
RBM39-236ENST00000490484 CRYBG1Q9Y4K1 1723 aa14.89□□□□□ -0.03
RBM39-236ENST00000490484 ROCK2O75116 1388 aaKnown RBP14.89□□□□□ -0.03
RBM39-236ENST00000490484 UPF1Q92900 1129 aaKnown RBP eCLIP14.89□□□□□ -0.03
RBM39-236ENST00000490484 EP400Q96L91 3159 aa14.89□□□□□ -0.03
RBM39-236ENST00000490484 NWD2Q9ULI1 1742 aa14.89□□□□□ -0.03
RBM39-236ENST00000490484 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
RBM39-236ENST00000490484 GLI3P10071 1580 aa14.88□□□□□ -0.03
RBM39-236ENST00000490484 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms