RNA–Protein interactions for RNA: ENST00000490277.1

TPT1-207, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2

Gene TPT1, Length 1,851 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-207ENST00000490277 SIRT1Q96EB6 747 aa13.04□□□□□ -0.32
TPT1-207ENST00000490277 DHX57Q6P158 1386 aaKnown RBP13.03□□□□□ -0.32
TPT1-207ENST00000490277 TECPR2O15040 1411 aa13.03□□□□□ -0.32
TPT1-207ENST00000490277 ESCO1Q5FWF5 840 aa13.03□□□□□ -0.32
TPT1-207ENST00000490277 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
TPT1-207ENST00000490277 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
TPT1-207ENST00000490277 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
TPT1-207ENST00000490277 STAC3Q96MF2 364 aa13.02□□□□□ -0.32
TPT1-207ENST00000490277 MYOM2P54296 1465 aa13.01□□□□□ -0.33
TPT1-207ENST00000490277 LRP6O75581 1613 aa13.01□□□□□ -0.33
TPT1-207ENST00000490277 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
TPT1-207ENST00000490277 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
TPT1-207ENST00000490277 DCAF11Q8TEB1 546 aa13□□□□□ -0.33
TPT1-207ENST00000490277 KDM2AQ9Y2K7 1162 aa13□□□□□ -0.33
TPT1-207ENST00000490277 CDC42BPGQ6DT37 1551 aa13□□□□□ -0.33
TPT1-207ENST00000490277 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
TPT1-207ENST00000490277 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
TPT1-207ENST00000490277 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
TPT1-207ENST00000490277 PLEKHH1Q9ULM0 1364 aa12.98□□□□□ -0.33
TPT1-207ENST00000490277 POGKQ9P215 609 aa12.98□□□□□ -0.33
TPT1-207ENST00000490277 LAMC1P11047 1609 aa12.98□□□□□ -0.33
TPT1-207ENST00000490277 KNDC1Q76NI1 1749 aa12.98□□□□□ -0.33
TPT1-207ENST00000490277 FOXO3O43524 673 aa12.97□□□□□ -0.33
TPT1-207ENST00000490277 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
TPT1-207ENST00000490277 C8orf37Q96NL8 207 aa12.96□□□□□ -0.33
TPT1-207ENST00000490277 AFF2P51816 1311 aa12.96□□□□□ -0.34
TPT1-207ENST00000490277 RXRBP28702 533 aa12.95□□□□□ -0.34
TPT1-207ENST00000490277 SAFB2Q14151 953 aaKnown RBP eCLIP12.95□□□□□ -0.34
TPT1-207ENST00000490277 NGLY1Q96IV0 654 aa12.95□□□□□ -0.34
TPT1-207ENST00000490277 ADAMTS2O95450 1211 aa12.95□□□□□ -0.34
TPT1-207ENST00000490277 TRAK1Q9UPV9 953 aa12.94□□□□□ -0.34
TPT1-207ENST00000490277 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
TPT1-207ENST00000490277 DLC1Q96QB1 1528 aa12.92□□□□□ -0.34
TPT1-207ENST00000490277 PSME1Q06323 249 aa12.92□□□□□ -0.34
TPT1-207ENST00000490277 QTRT2Q9H974 415 aaKnown RBP12.92□□□□□ -0.34
TPT1-207ENST00000490277 PHF8Q9UPP1 1060 aa12.92□□□□□ -0.34
TPT1-207ENST00000490277 KRT28Q7Z3Y7 464 aa12.91□□□□□ -0.34
TPT1-207ENST00000490277 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
TPT1-207ENST00000490277 PXDNQ92626 1479 aa12.91□□□□□ -0.34
TPT1-207ENST00000490277 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
TPT1-207ENST00000490277 ADGRB1O14514 1584 aa12.9□□□□□ -0.34
TPT1-207ENST00000490277 USP21Q9UK80 565 aa12.89□□□□□ -0.35
TPT1-207ENST00000490277 KIF1AQ12756 1690 aa12.89□□□□□ -0.35
TPT1-207ENST00000490277 SPATA31A3Q5VYP0 1347 aa12.88□□□□□ -0.35
TPT1-207ENST00000490277 MINK1Q8N4C8 1332 aaPredicted RBP12.88□□□□□ -0.35
TPT1-207ENST00000490277 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
TPT1-207ENST00000490277 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
TPT1-207ENST00000490277 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
TPT1-207ENST00000490277 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
TPT1-207ENST00000490277 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
TPT1-207ENST00000490277 CDK12Q9NYV4 1490 aaPredicted RBP12.87□□□□□ -0.35
TPT1-207ENST00000490277 TRPC5Q9UL62 973 aaPredicted RBP12.87□□□□□ -0.35
TPT1-207ENST00000490277 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
TPT1-207ENST00000490277 HAP1P54257 671 aaPredicted RBP12.87□□□□□ -0.35
TPT1-207ENST00000490277 PMFBP1Q8TBY8 1022 aa12.86□□□□□ -0.35
TPT1-207ENST00000490277 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
TPT1-207ENST00000490277 SBNO1A3KN83 1393 aa12.84□□□□□ -0.35
TPT1-207ENST00000490277 ADGRB2O60241 1585 aa12.84□□□□□ -0.35
TPT1-207ENST00000490277 RGPD8O14715 1765 aaPredicted RBP12.84□□□□□ -0.35
TPT1-207ENST00000490277 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
TPT1-207ENST00000490277 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
TPT1-207ENST00000490277 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
TPT1-207ENST00000490277 NGDNQ8NEJ9 315 aaKnown RBP12.82□□□□□ -0.36
TPT1-207ENST00000490277 UPF1Q92900 1129 aaKnown RBP eCLIP12.82□□□□□ -0.36
TPT1-207ENST00000490277 PRR36Q9H6K5 1346 aa12.81□□□□□ -0.36
TPT1-207ENST00000490277 PLEKHG5O94827 1062 aa12.81□□□□□ -0.36
TPT1-207ENST00000490277 NBPF1Q3BBV0 1214 aa12.81□□□□□ -0.36
TPT1-207ENST00000490277 TULP4Q9NRJ4 1543 aa12.81□□□□□ -0.36
TPT1-207ENST00000490277 CABLES1Q8TDN4 633 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 NUDT16Q96DE0 195 aaKnown RBP12.8□□□□□ -0.36
TPT1-207ENST00000490277 CDK19Q9BWU1 502 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 KIAA1210Q9ULL0 1709 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 ATRNO75882 1429 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 NEUROD1Q13562 356 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 UNC5CLQ8IV45 518 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 BCL9LQ86UU0 1499 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 RGS12O14924 1447 aa12.8□□□□□ -0.36
TPT1-207ENST00000490277 GJD4Q96KN9 370 aaPredicted RBP12.79□□□□□ -0.36
TPT1-207ENST00000490277 SIN3AQ96ST3 1273 aa12.79□□□□□ -0.36
TPT1-207ENST00000490277 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
TPT1-207ENST00000490277 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
TPT1-207ENST00000490277 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
TPT1-207ENST00000490277 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
TPT1-207ENST00000490277 CENPJQ9HC77 1338 aaPredicted RBP12.77□□□□□ -0.37
TPT1-207ENST00000490277 SLIT2O94813 1529 aa12.76□□□□□ -0.37
TPT1-207ENST00000490277 ATAD2Q6PL18 1390 aa12.76□□□□□ -0.37
TPT1-207ENST00000490277 SRPK2P78362 688 aaKnown RBP12.75□□□□□ -0.37
TPT1-207ENST00000490277 ATP7BP35670 1465 aa12.74□□□□□ -0.37
TPT1-207ENST00000490277 FAM83GA6ND36 823 aa12.74□□□□□ -0.37
TPT1-207ENST00000490277 CCDC9Q9Y3X0 531 aaKnown RBP12.74□□□□□ -0.37
TPT1-207ENST00000490277 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
TPT1-207ENST00000490277 VPS72Q15906 364 aa12.74□□□□□ -0.37
TPT1-207ENST00000490277 NBPF8Q3BBV2 869 aa12.74□□□□□ -0.37
TPT1-207ENST00000490277 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
TPT1-207ENST00000490277 ACEP12821 1306 aa12.73□□□□□ -0.37
TPT1-207ENST00000490277 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
TPT1-207ENST00000490277 TRPM3Q9HCF6 1732 aaPredicted RBP12.73□□□□□ -0.37
TPT1-207ENST00000490277 TRIM26Q12899 539 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms