RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
SRSF4-204ENST00000489898 CRYBG1Q9Y4K1 1723 aa17.72■□□□□ 0.43
SRSF4-204ENST00000489898 YTHDC2Q9H6S0 1430 aaKnown RBP17.72■□□□□ 0.43
SRSF4-204ENST00000489898 TRPM3Q9HCF6 1732 aaPredicted RBP17.69■□□□□ 0.42
SRSF4-204ENST00000489898 ABCC11Q96J66 1382 aa17.69■□□□□ 0.42
SRSF4-204ENST00000489898 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
SRSF4-204ENST00000489898 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
SRSF4-204ENST00000489898 PNPLA6Q8IY17 1366 aa17.67■□□□□ 0.42
SRSF4-204ENST00000489898 ATF3P18847 181 aa17.67■□□□□ 0.42
SRSF4-204ENST00000489898 EP400Q96L91 3159 aa17.67■□□□□ 0.42
SRSF4-204ENST00000489898 POTEAQ6S8J7 498 aa17.66■□□□□ 0.42
SRSF4-204ENST00000489898 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
SRSF4-204ENST00000489898 C14orf37Q86TY3 774 aa17.65■□□□□ 0.42
SRSF4-204ENST00000489898 DDX17Q92841 729 aaKnown RBP17.65■□□□□ 0.42
SRSF4-204ENST00000489898 RGL3Q3MIN7 710 aa17.64■□□□□ 0.41
SRSF4-204ENST00000489898 ALS2Q96Q42 1657 aa17.64■□□□□ 0.41
SRSF4-204ENST00000489898 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
SRSF4-204ENST00000489898 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
SRSF4-204ENST00000489898 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
SRSF4-204ENST00000489898 HRCP23327 699 aa17.61■□□□□ 0.41
SRSF4-204ENST00000489898 TMEM132EQ6IEE7 984 aa17.61■□□□□ 0.41
SRSF4-204ENST00000489898 SOS2Q07890 1332 aaPredicted RBP17.61■□□□□ 0.41
SRSF4-204ENST00000489898 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
SRSF4-204ENST00000489898 C14orf93Q9H972 538 aaKnown RBP17.6■□□□□ 0.41
SRSF4-204ENST00000489898 PLCH1Q4KWH8 1693 aa17.59■□□□□ 0.41
SRSF4-204ENST00000489898 TRPM1Q7Z4N2 1603 aa17.59■□□□□ 0.41
SRSF4-204ENST00000489898 PHF23Q9BUL5 403 aaPredicted RBP17.59■□□□□ 0.41
SRSF4-204ENST00000489898 WAPLQ7Z5K2 1190 aa17.58■□□□□ 0.4
SRSF4-204ENST00000489898 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
SRSF4-204ENST00000489898 NRAPQ86VF7 1730 aa17.56■□□□□ 0.4
SRSF4-204ENST00000489898 TULP4Q9NRJ4 1543 aa17.56■□□□□ 0.4
SRSF4-204ENST00000489898 QRICH2Q9H0J4 1663 aa17.55■□□□□ 0.4
SRSF4-204ENST00000489898 CDK12Q9NYV4 1490 aaPredicted RBP17.54■□□□□ 0.4
SRSF4-204ENST00000489898 ATP7BP35670 1465 aa17.53■□□□□ 0.4
SRSF4-204ENST00000489898 PHRF1Q9P1Y6 1649 aaKnown RBP17.53■□□□□ 0.4
SRSF4-204ENST00000489898 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.4
SRSF4-204ENST00000489898 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
SRSF4-204ENST00000489898 STK26Q9P289 416 aa17.52■□□□□ 0.4
SRSF4-204ENST00000489898 ANKARQ7Z5J8 1434 aa17.51■□□□□ 0.39
SRSF4-204ENST00000489898 RGS12O14924 1447 aa17.5■□□□□ 0.39
SRSF4-204ENST00000489898 GLI3P10071 1580 aa17.49■□□□□ 0.39
SRSF4-204ENST00000489898 BRWD3Q6RI45 1802 aa17.49■□□□□ 0.39
SRSF4-204ENST00000489898 LRRC59Q96AG4 307 aaKnown RBP17.47■□□□□ 0.39
SRSF4-204ENST00000489898 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
SRSF4-204ENST00000489898 PRR36Q9H6K5 1346 aa17.47■□□□□ 0.39
SRSF4-204ENST00000489898 AFF2P51816 1311 aa17.46■□□□□ 0.38
SRSF4-204ENST00000489898 BCL9LQ86UU0 1499 aa17.45■□□□□ 0.38
SRSF4-204ENST00000489898 PRAM1Q96QH2 718 aa17.45■□□□□ 0.38
SRSF4-204ENST00000489898 SLIT2O94813 1529 aa17.45■□□□□ 0.38
SRSF4-204ENST00000489898 ATRNO75882 1429 aa17.45■□□□□ 0.38
SRSF4-204ENST00000489898 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
SRSF4-204ENST00000489898 NRKQ7Z2Y5 1582 aa17.42■□□□□ 0.38
SRSF4-204ENST00000489898 NUTM2FA1L443 756 aa17.42■□□□□ 0.38
SRSF4-204ENST00000489898 DCAF11Q8TEB1 546 aa17.42■□□□□ 0.38
SRSF4-204ENST00000489898 AKAP12Q02952 1782 aa17.41■□□□□ 0.38
SRSF4-204ENST00000489898 NUTM2BA6NNL0 878 aaPredicted RBP17.41■□□□□ 0.38
SRSF4-204ENST00000489898 NUTM2EB1AL46 878 aaPredicted RBP17.41■□□□□ 0.38
SRSF4-204ENST00000489898 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
SRSF4-204ENST00000489898 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
SRSF4-204ENST00000489898 NUTM2AQ8IVF1 878 aaPredicted RBP17.41■□□□□ 0.38
SRSF4-204ENST00000489898 SPATA31A3Q5VYP0 1347 aa17.41■□□□□ 0.38
SRSF4-204ENST00000489898 FOXO3O43524 673 aa17.4■□□□□ 0.38
SRSF4-204ENST00000489898 COL14A1Q05707 1796 aaKnown RBP17.39■□□□□ 0.37
SRSF4-204ENST00000489898 SBNO1A3KN83 1393 aa17.39■□□□□ 0.37
SRSF4-204ENST00000489898 LMO7Q8WWI1 1683 aa17.37■□□□□ 0.37
SRSF4-204ENST00000489898 SAFB2Q14151 953 aaKnown RBP eCLIP17.37■□□□□ 0.37
SRSF4-204ENST00000489898 ZNF772Q68DY9 489 aaPredicted RBP17.37■□□□□ 0.37
SRSF4-204ENST00000489898 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
SRSF4-204ENST00000489898 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
SRSF4-204ENST00000489898 FNBP4Q8N3X1 1017 aaPredicted RBP17.36■□□□□ 0.37
SRSF4-204ENST00000489898 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
SRSF4-204ENST00000489898 C8orf37Q96NL8 207 aa17.36■□□□□ 0.37
SRSF4-204ENST00000489898 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
SRSF4-204ENST00000489898 PIK3C2AO00443 1686 aa17.36■□□□□ 0.37
SRSF4-204ENST00000489898 THSD7AQ9UPZ6 1657 aa17.35■□□□□ 0.37
SRSF4-204ENST00000489898 MON2Q7Z3U7 1717 aa17.35■□□□□ 0.37
SRSF4-204ENST00000489898 USP54Q70EL1 1684 aa17.34■□□□□ 0.37
SRSF4-204ENST00000489898 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
SRSF4-204ENST00000489898 PHF8Q9UPP1 1060 aa17.34■□□□□ 0.37
SRSF4-204ENST00000489898 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
SRSF4-204ENST00000489898 ADAMTS2O95450 1211 aa17.33■□□□□ 0.36
SRSF4-204ENST00000489898 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.36
SRSF4-204ENST00000489898 WNK3Q9BYP7 1800 aa17.33■□□□□ 0.36
SRSF4-204ENST00000489898 SRCAPQ6ZRS2 3230 aa17.32■□□□□ 0.36
SRSF4-204ENST00000489898 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
SRSF4-204ENST00000489898 POLR3AO14802 1390 aaPredicted RBP17.31■□□□□ 0.36
SRSF4-204ENST00000489898 EIF3AQ14152 1382 aaKnown RBP17.3■□□□□ 0.36
SRSF4-204ENST00000489898 GPRASP1Q5JY77 1395 aa17.3■□□□□ 0.36
SRSF4-204ENST00000489898 WASLO00401 505 aaPredicted RBP17.3■□□□□ 0.36
SRSF4-204ENST00000489898 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
SRSF4-204ENST00000489898 COL18A1P39060 1754 aa17.28■□□□□ 0.36
SRSF4-204ENST00000489898 TNS1Q9HBL0 1735 aaKnown RBP17.28■□□□□ 0.36
SRSF4-204ENST00000489898 ARHGEF10O15013 1369 aa17.28■□□□□ 0.36
SRSF4-204ENST00000489898 RXRBP28702 533 aa17.27■□□□□ 0.36
SRSF4-204ENST00000489898 PMFBP1Q8TBY8 1022 aa17.27■□□□□ 0.36
SRSF4-204ENST00000489898 UPF1Q92900 1129 aaKnown RBP eCLIP17.27■□□□□ 0.36
SRSF4-204ENST00000489898 L3MBTL2Q969R5 705 aa17.27■□□□□ 0.36
SRSF4-204ENST00000489898 SIN3AQ96ST3 1273 aa17.27■□□□□ 0.36
SRSF4-204ENST00000489898 POGKQ9P215 609 aa17.27■□□□□ 0.36
SRSF4-204ENST00000489898 RBM6P78332 1123 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms