RNA–Protein interactions for RNA: ENST00000489207.1

ABCD4-213, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 379 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-213ENST00000489207 SCAF1Q9H7N4 1312 aaKnown RBP11.6□□□□□ -0.55
ABCD4-213ENST00000489207 ANP32CO43423 234 aa11.6□□□□□ -0.55
ABCD4-213ENST00000489207 PRAM1Q96QH2 718 aa11.6□□□□□ -0.55
ABCD4-213ENST00000489207 POGKQ9P215 609 aa11.6□□□□□ -0.55
ABCD4-213ENST00000489207 SETD1AO15047 1707 aaKnown RBP11.6□□□□□ -0.55
ABCD4-213ENST00000489207 NINLQ9Y2I6 1382 aa11.59□□□□□ -0.55
ABCD4-213ENST00000489207 BCANQ96GW7 911 aa11.59□□□□□ -0.55
ABCD4-213ENST00000489207 STK26Q9P289 416 aa11.59□□□□□ -0.55
ABCD4-213ENST00000489207 AMOTL2Q9Y2J4 779 aa11.59□□□□□ -0.55
ABCD4-213ENST00000489207 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
ABCD4-213ENST00000489207 SLC26A8Q96RN1 970 aa11.58□□□□□ -0.56
ABCD4-213ENST00000489207 SENP3Q9H4L4 574 aaPredicted RBP11.58□□□□□ -0.56
ABCD4-213ENST00000489207 KCNA6P17658 529 aa11.57□□□□□ -0.56
ABCD4-213ENST00000489207 PANK3Q9H999 370 aa11.57□□□□□ -0.56
ABCD4-213ENST00000489207 NPHP4O75161 1426 aaPredicted RBP11.57□□□□□ -0.56
ABCD4-213ENST00000489207 PTPRUQ92729 1446 aa11.57□□□□□ -0.56
ABCD4-213ENST00000489207 ATAD2Q6PL18 1390 aa11.56□□□□□ -0.56
ABCD4-213ENST00000489207 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
ABCD4-213ENST00000489207 PTCH1Q13635 1447 aa11.56□□□□□ -0.56
ABCD4-213ENST00000489207 PRKRIP1Q9H875 184 aaPredicted RBP11.56□□□□□ -0.56
ABCD4-213ENST00000489207 CPS1P31327 1500 aa11.55□□□□□ -0.56
ABCD4-213ENST00000489207 RALBP1Q15311 655 aa11.55□□□□□ -0.56
ABCD4-213ENST00000489207 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
ABCD4-213ENST00000489207 CDK19Q9BWU1 502 aa11.55□□□□□ -0.56
ABCD4-213ENST00000489207 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
ABCD4-213ENST00000489207 ROBO2Q9HCK4 1378 aa11.54□□□□□ -0.56
ABCD4-213ENST00000489207 RGS17Q9UGC6 210 aaPredicted RBP11.54□□□□□ -0.56
ABCD4-213ENST00000489207 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
ABCD4-213ENST00000489207 NCOA3Q9Y6Q9 1424 aa11.53□□□□□ -0.56
ABCD4-213ENST00000489207 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
ABCD4-213ENST00000489207 CCDC61Q9Y6R9 512 aa11.52□□□□□ -0.57
ABCD4-213ENST00000489207 PLEKHH1Q9ULM0 1364 aa11.52□□□□□ -0.57
ABCD4-213ENST00000489207 PLEKHG3A1L390 1219 aa11.51□□□□□ -0.57
ABCD4-213ENST00000489207 ZNF692Q9BU19 519 aaPredicted RBP11.51□□□□□ -0.57
ABCD4-213ENST00000489207 CARD14Q9BXL6 1004 aa11.51□□□□□ -0.57
ABCD4-213ENST00000489207 SLC12A5Q9H2X9 1139 aa11.51□□□□□ -0.57
ABCD4-213ENST00000489207 KNSTRNQ9Y448 316 aa11.51□□□□□ -0.57
ABCD4-213ENST00000489207 MINK1Q8N4C8 1332 aaPredicted RBP11.51□□□□□ -0.57
ABCD4-213ENST00000489207 TOM1O60784 492 aa11.5□□□□□ -0.57
ABCD4-213ENST00000489207 PHF23Q9BUL5 403 aaPredicted RBP11.5□□□□□ -0.57
ABCD4-213ENST00000489207 TERF2IPQ9NYB0 399 aa11.5□□□□□ -0.57
ABCD4-213ENST00000489207 ANKRD36BQ8N2N9 1353 aa11.5□□□□□ -0.57
ABCD4-213ENST00000489207 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
ABCD4-213ENST00000489207 QRICH2Q9H0J4 1663 aa11.49□□□□□ -0.57
ABCD4-213ENST00000489207 STRCP1A6NGW2 1772 aa11.49□□□□□ -0.57
ABCD4-213ENST00000489207 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
ABCD4-213ENST00000489207 POLR3GLQ9BT43 218 aa11.49□□□□□ -0.57
ABCD4-213ENST00000489207 CABP2Q9NPB3 220 aa11.49□□□□□ -0.57
ABCD4-213ENST00000489207 SAFB2Q14151 953 aaKnown RBP eCLIP11.48□□□□□ -0.57
ABCD4-213ENST00000489207 NUDT16Q96DE0 195 aaKnown RBP11.48□□□□□ -0.57
ABCD4-213ENST00000489207 PARD3Q8TEW0 1356 aa11.48□□□□□ -0.57
ABCD4-213ENST00000489207 ADGRB2O60241 1585 aa11.48□□□□□ -0.57
ABCD4-213ENST00000489207 XRN1Q8IZH2 1706 aaKnown RBP11.48□□□□□ -0.57
ABCD4-213ENST00000489207 CHD2O14647 1828 aaKnown RBP11.47□□□□□ -0.57
ABCD4-213ENST00000489207 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
ABCD4-213ENST00000489207 CPSF1Q10570 1443 aaKnown RBP11.46□□□□□ -0.57
ABCD4-213ENST00000489207 NSD2O96028 1365 aa11.46□□□□□ -0.57
ABCD4-213ENST00000489207 HDGFL2Q7Z4V5 671 aaPredicted RBP11.46□□□□□ -0.57
ABCD4-213ENST00000489207 ANKARQ7Z5J8 1434 aa11.45□□□□□ -0.58
ABCD4-213ENST00000489207 MYBBP1AQ9BQG0 1328 aaKnown RBP11.45□□□□□ -0.58
ABCD4-213ENST00000489207 TMC1Q8TDI8 760 aa11.45□□□□□ -0.58
ABCD4-213ENST00000489207 C19orf44Q9H6X5 657 aa11.45□□□□□ -0.58
ABCD4-213ENST00000489207 LRRC7Q96NW7 1537 aa11.45□□□□□ -0.58
ABCD4-213ENST00000489207 ATP7BP35670 1465 aa11.44□□□□□ -0.58
ABCD4-213ENST00000489207 BRD4O60885 1362 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-213ENST00000489207 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
ABCD4-213ENST00000489207 NWD1Q149M9 1564 aa11.44□□□□□ -0.58
ABCD4-213ENST00000489207 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
ABCD4-213ENST00000489207 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
ABCD4-213ENST00000489207 POTEAQ6S8J7 498 aa11.43□□□□□ -0.58
ABCD4-213ENST00000489207 NLRP13Q86W25 1043 aa11.43□□□□□ -0.58
ABCD4-213ENST00000489207 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-213ENST00000489207 INSRP06213 1382 aa11.42□□□□□ -0.58
ABCD4-213ENST00000489207 PRR36Q9H6K5 1346 aa11.42□□□□□ -0.58
ABCD4-213ENST00000489207 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
ABCD4-213ENST00000489207 MYOM1P52179 1685 aa11.42□□□□□ -0.58
ABCD4-213ENST00000489207 POLR3AO14802 1390 aaPredicted RBP11.41□□□□□ -0.58
ABCD4-213ENST00000489207 FYB1O15117 783 aa11.41□□□□□ -0.58
ABCD4-213ENST00000489207 ADGRL3Q9HAR2 1447 aa11.41□□□□□ -0.58
ABCD4-213ENST00000489207 A0A1W2PP64 1363 aa11.41□□□□□ -0.58
ABCD4-213ENST00000489207 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
ABCD4-213ENST00000489207 DCCP43146 1447 aa11.4□□□□□ -0.58
ABCD4-213ENST00000489207 PPIP5K1Q6PFW1 1433 aa11.4□□□□□ -0.58
ABCD4-213ENST00000489207 USP32Q8NFA0 1604 aa11.39□□□□□ -0.59
ABCD4-213ENST00000489207 EDC4Q6P2E9 1401 aaKnown RBP11.39□□□□□ -0.59
ABCD4-213ENST00000489207 SSH2Q76I76 1423 aa11.39□□□□□ -0.59
ABCD4-213ENST00000489207 CDC42BPGQ6DT37 1551 aa11.38□□□□□ -0.59
ABCD4-213ENST00000489207 NSD3Q9BZ95 1437 aa11.38□□□□□ -0.59
ABCD4-213ENST00000489207 PPP2R1AP30153 589 aa11.38□□□□□ -0.59
ABCD4-213ENST00000489207 CC2D1BQ5T0F9 858 aaKnown RBP11.38□□□□□ -0.59
ABCD4-213ENST00000489207 ACEP12821 1306 aa11.37□□□□□ -0.59
ABCD4-213ENST00000489207 TTC21AQ8NDW8 1320 aa11.37□□□□□ -0.59
ABCD4-213ENST00000489207 XIRP1Q702N8 1843 aaKnown RBP11.37□□□□□ -0.59
ABCD4-213ENST00000489207 CADPS2Q86UW7 1296 aa11.37□□□□□ -0.59
ABCD4-213ENST00000489207 MORC1Q86VD1 984 aa11.37□□□□□ -0.59
ABCD4-213ENST00000489207 CCDC184Q52MB2 194 aa11.36□□□□□ -0.59
ABCD4-213ENST00000489207 MRS2Q9HD23 443 aa11.36□□□□□ -0.59
ABCD4-213ENST00000489207 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
ABCD4-213ENST00000489207 TMEM94Q12767 1356 aa11.35□□□□□ -0.59
ABCD4-213ENST00000489207 USP31Q70CQ4 1352 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms