RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 C14orf93Q9H972 538 aaKnown RBP20.57■□□□□ 0.88
VTI1A-206ENST00000489142 KDM2AQ9Y2K7 1162 aa20.57■□□□□ 0.88
VTI1A-206ENST00000489142 ORAI2Q96SN7 254 aa20.56■□□□□ 0.88
VTI1A-206ENST00000489142 ABCC11Q96J66 1382 aa20.56■□□□□ 0.88
VTI1A-206ENST00000489142 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
VTI1A-206ENST00000489142 NUTM2FA1L443 756 aa20.53■□□□□ 0.88
VTI1A-206ENST00000489142 NUTM2BA6NNL0 878 aaPredicted RBP20.53■□□□□ 0.88
VTI1A-206ENST00000489142 NUTM2EB1AL46 878 aaPredicted RBP20.53■□□□□ 0.88
VTI1A-206ENST00000489142 NUTM2AQ8IVF1 878 aaPredicted RBP20.53■□□□□ 0.88
VTI1A-206ENST00000489142 SPATA31A6Q5VVP1 1343 aa20.53■□□□□ 0.88
VTI1A-206ENST00000489142 POTEAQ6S8J7 498 aa20.52■□□□□ 0.88
VTI1A-206ENST00000489142 FMN2Q9NZ56 1722 aa20.52■□□□□ 0.88
VTI1A-206ENST00000489142 MEX3CQ5U5Q3 659 aaKnown RBP20.51■□□□□ 0.87
VTI1A-206ENST00000489142 DHX57Q6P158 1386 aaKnown RBP20.5■□□□□ 0.87
VTI1A-206ENST00000489142 RGPD8O14715 1765 aaPredicted RBP20.5■□□□□ 0.87
VTI1A-206ENST00000489142 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
VTI1A-206ENST00000489142 ADGRB1O14514 1584 aa20.5■□□□□ 0.87
VTI1A-206ENST00000489142 ESCO1Q5FWF5 840 aa20.49■□□□□ 0.87
VTI1A-206ENST00000489142 LRRC59Q96AG4 307 aaKnown RBP20.48■□□□□ 0.87
VTI1A-206ENST00000489142 PNPLA6Q8IY17 1366 aa20.47■□□□□ 0.87
VTI1A-206ENST00000489142 PRAM1Q96QH2 718 aa20.47■□□□□ 0.87
VTI1A-206ENST00000489142 XPCQ01831 940 aaPredicted RBP20.46■□□□□ 0.87
VTI1A-206ENST00000489142 DLC1Q96QB1 1528 aa20.44■□□□□ 0.86
VTI1A-206ENST00000489142 TRAK1Q9UPV9 953 aa20.44■□□□□ 0.86
VTI1A-206ENST00000489142 SOS2Q07890 1332 aaPredicted RBP20.44■□□□□ 0.86
VTI1A-206ENST00000489142 FOXO3O43524 673 aa20.42■□□□□ 0.86
VTI1A-206ENST00000489142 SIRT1Q96EB6 747 aa20.42■□□□□ 0.86
VTI1A-206ENST00000489142 POGKQ9P215 609 aa20.42■□□□□ 0.86
VTI1A-206ENST00000489142 PXDNQ92626 1479 aa20.42■□□□□ 0.86
VTI1A-206ENST00000489142 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
VTI1A-206ENST00000489142 NPHP3Q7Z494 1330 aa20.4■□□□□ 0.86
VTI1A-206ENST00000489142 ARHGEF28Q8N1W1 1705 aaKnown RBP20.4■□□□□ 0.86
VTI1A-206ENST00000489142 HIRIP3Q9BW71 556 aaPredicted RBP20.4■□□□□ 0.86
VTI1A-206ENST00000489142 USP32Q8NFA0 1604 aa20.39■□□□□ 0.86
VTI1A-206ENST00000489142 COL22A1Q8NFW1 1626 aaPredicted RBP20.38■□□□□ 0.85
VTI1A-206ENST00000489142 ADGRB2O60241 1585 aa20.38■□□□□ 0.85
VTI1A-206ENST00000489142 MINK1Q8N4C8 1332 aaPredicted RBP20.38■□□□□ 0.85
VTI1A-206ENST00000489142 ADAMTS2O95450 1211 aa20.38■□□□□ 0.85
VTI1A-206ENST00000489142 C8orf37Q96NL8 207 aa20.38■□□□□ 0.85
VTI1A-206ENST00000489142 AFF2P51816 1311 aa20.37■□□□□ 0.85
VTI1A-206ENST00000489142 ZNF772Q68DY9 489 aaPredicted RBP20.35■□□□□ 0.85
VTI1A-206ENST00000489142 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
VTI1A-206ENST00000489142 KIAA1210Q9ULL0 1709 aa20.35■□□□□ 0.85
VTI1A-206ENST00000489142 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
VTI1A-206ENST00000489142 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.85
VTI1A-206ENST00000489142 MARF1Q9Y4F3 1742 aaKnown RBP20.31■□□□□ 0.84
VTI1A-206ENST00000489142 NBPF1Q3BBV0 1214 aa20.31■□□□□ 0.84
VTI1A-206ENST00000489142 NEUROD1Q13562 356 aa20.3■□□□□ 0.84
VTI1A-206ENST00000489142 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
VTI1A-206ENST00000489142 PMFBP1Q8TBY8 1022 aa20.3■□□□□ 0.84
VTI1A-206ENST00000489142 NGLY1Q96IV0 654 aa20.3■□□□□ 0.84
VTI1A-206ENST00000489142 ANKARQ7Z5J8 1434 aa20.29■□□□□ 0.84
VTI1A-206ENST00000489142 PLEKHG5O94827 1062 aa20.29■□□□□ 0.84
VTI1A-206ENST00000489142 PRR36Q9H6K5 1346 aa20.28■□□□□ 0.84
VTI1A-206ENST00000489142 TULP4Q9NRJ4 1543 aa20.28■□□□□ 0.84
VTI1A-206ENST00000489142 L3MBTL2Q969R5 705 aa20.28■□□□□ 0.84
VTI1A-206ENST00000489142 SPATA31A3Q5VYP0 1347 aa20.27■□□□□ 0.83
VTI1A-206ENST00000489142 WASLO00401 505 aaPredicted RBP20.26■□□□□ 0.83
VTI1A-206ENST00000489142 RXRBP28702 533 aa20.26■□□□□ 0.83
VTI1A-206ENST00000489142 TNS3Q68CZ2 1445 aa20.26■□□□□ 0.83
VTI1A-206ENST00000489142 ABCA3Q99758 1704 aa20.24■□□□□ 0.83
VTI1A-206ENST00000489142 TRPM3Q9HCF6 1732 aaPredicted RBP20.24■□□□□ 0.83
VTI1A-206ENST00000489142 PSME1Q06323 249 aa20.24■□□□□ 0.83
VTI1A-206ENST00000489142 LMOD2Q6P5Q4 547 aa20.24■□□□□ 0.83
VTI1A-206ENST00000489142 QTRT2Q9H974 415 aaKnown RBP20.24■□□□□ 0.83
VTI1A-206ENST00000489142 ITSN1Q15811 1721 aa20.24■□□□□ 0.83
VTI1A-206ENST00000489142 USP21Q9UK80 565 aa20.23■□□□□ 0.83
VTI1A-206ENST00000489142 TRPM1Q7Z4N2 1603 aa20.23■□□□□ 0.83
VTI1A-206ENST00000489142 EIF3AQ14152 1382 aaKnown RBP20.22■□□□□ 0.83
VTI1A-206ENST00000489142 CABLES1Q8TDN4 633 aa20.22■□□□□ 0.83
VTI1A-206ENST00000489142 ATP7BP35670 1465 aa20.22■□□□□ 0.83
VTI1A-206ENST00000489142 QRICH2Q9H0J4 1663 aa20.22■□□□□ 0.83
VTI1A-206ENST00000489142 RGS12O14924 1447 aa20.2■□□□□ 0.82
VTI1A-206ENST00000489142 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
VTI1A-206ENST00000489142 TOPAZ1Q8N9V7 1692 aa20.19■□□□□ 0.82
VTI1A-206ENST00000489142 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
VTI1A-206ENST00000489142 CDK19Q9BWU1 502 aa20.19■□□□□ 0.82
VTI1A-206ENST00000489142 ALS2Q96Q42 1657 aa20.19■□□□□ 0.82
VTI1A-206ENST00000489142 HAP1P54257 671 aaPredicted RBP20.18■□□□□ 0.82
VTI1A-206ENST00000489142 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
VTI1A-206ENST00000489142 NGDNQ8NEJ9 315 aaKnown RBP20.18■□□□□ 0.82
VTI1A-206ENST00000489142 NUDT16Q96DE0 195 aaKnown RBP20.18■□□□□ 0.82
VTI1A-206ENST00000489142 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
VTI1A-206ENST00000489142 RBM6P78332 1123 aaKnown RBP20.17■□□□□ 0.82
VTI1A-206ENST00000489142 BCL9LQ86UU0 1499 aa20.17■□□□□ 0.82
VTI1A-206ENST00000489142 ARHGEF10O15013 1369 aa20.16■□□□□ 0.82
VTI1A-206ENST00000489142 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
VTI1A-206ENST00000489142 ATRNO75882 1429 aa20.16■□□□□ 0.82
VTI1A-206ENST00000489142 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
VTI1A-206ENST00000489142 TRPC5Q9UL62 973 aaPredicted RBP20.15■□□□□ 0.82
VTI1A-206ENST00000489142 CENPJQ9HC77 1338 aaPredicted RBP20.15■□□□□ 0.82
VTI1A-206ENST00000489142 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.14■□□□□ 0.81
VTI1A-206ENST00000489142 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
VTI1A-206ENST00000489142 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
VTI1A-206ENST00000489142 CRYBG1Q9Y4K1 1723 aa20.13■□□□□ 0.81
VTI1A-206ENST00000489142 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
VTI1A-206ENST00000489142 SLIT2O94813 1529 aa20.12■□□□□ 0.81
VTI1A-206ENST00000489142 SRPK2P78362 688 aaKnown RBP20.11■□□□□ 0.81
VTI1A-206ENST00000489142 CABP2Q9NPB3 220 aa20.11■□□□□ 0.81
VTI1A-206ENST00000489142 ACEP12821 1306 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms