RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PLEKHH1Q9ULM0 1364 aa17.73■□□□□ 0.43
TOP3A-206ENST00000489131 MIER1Q8N108 512 aa17.72■□□□□ 0.43
TOP3A-206ENST00000489131 POGKQ9P215 609 aa17.72■□□□□ 0.43
TOP3A-206ENST00000489131 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.7■□□□□ 0.42
TOP3A-206ENST00000489131 ATAD2Q6PL18 1390 aa17.7■□□□□ 0.42
TOP3A-206ENST00000489131 PER1O15534 1290 aaPredicted RBP17.7■□□□□ 0.42
TOP3A-206ENST00000489131 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
TOP3A-206ENST00000489131 AMOTL2Q9Y2J4 779 aa17.7■□□□□ 0.42
TOP3A-206ENST00000489131 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
TOP3A-206ENST00000489131 ANP32CO43423 234 aa17.68■□□□□ 0.42
TOP3A-206ENST00000489131 WAPLQ7Z5K2 1190 aa17.68■□□□□ 0.42
TOP3A-206ENST00000489131 STRCQ7RTU9 1775 aa17.68■□□□□ 0.42
TOP3A-206ENST00000489131 NPC1L1Q9UHC9 1359 aa17.67■□□□□ 0.42
TOP3A-206ENST00000489131 NKTRP30414 1462 aaKnown RBP17.67■□□□□ 0.42
TOP3A-206ENST00000489131 NCKAP5LQ9HCH0 1330 aa17.67■□□□□ 0.42
TOP3A-206ENST00000489131 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
TOP3A-206ENST00000489131 CCER2I3L3R5 266 aa17.65■□□□□ 0.42
TOP3A-206ENST00000489131 POLR3GLQ9BT43 218 aa17.65■□□□□ 0.42
TOP3A-206ENST00000489131 MINK1Q8N4C8 1332 aaPredicted RBP17.65■□□□□ 0.42
TOP3A-206ENST00000489131 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
TOP3A-206ENST00000489131 PRKRIP1Q9H875 184 aaPredicted RBP17.64■□□□□ 0.41
TOP3A-206ENST00000489131 PANK3Q9H999 370 aa17.64■□□□□ 0.41
TOP3A-206ENST00000489131 KCNA6P17658 529 aa17.63■□□□□ 0.41
TOP3A-206ENST00000489131 SAFB2Q14151 953 aaKnown RBP eCLIP17.63■□□□□ 0.41
TOP3A-206ENST00000489131 TOPAZ1Q8N9V7 1692 aa17.63■□□□□ 0.41
TOP3A-206ENST00000489131 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
TOP3A-206ENST00000489131 CDC42BPGQ6DT37 1551 aa17.62■□□□□ 0.41
TOP3A-206ENST00000489131 ILDR1Q86SU0 546 aaPredicted RBP17.62■□□□□ 0.41
TOP3A-206ENST00000489131 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
TOP3A-206ENST00000489131 ATP7BP35670 1465 aa17.62■□□□□ 0.41
TOP3A-206ENST00000489131 CD163L1Q9NR16 1453 aa17.61■□□□□ 0.41
TOP3A-206ENST00000489131 CABP2Q9NPB3 220 aa17.6■□□□□ 0.41
TOP3A-206ENST00000489131 PARD3Q8TEW0 1356 aa17.6■□□□□ 0.41
TOP3A-206ENST00000489131 NCOA3Q9Y6Q9 1424 aa17.6■□□□□ 0.41
TOP3A-206ENST00000489131 NALCNQ8IZF0 1738 aa17.6■□□□□ 0.41
TOP3A-206ENST00000489131 HSPA2P54652 639 aa17.59■□□□□ 0.41
TOP3A-206ENST00000489131 SRPK2P78362 688 aaKnown RBP17.59■□□□□ 0.41
TOP3A-206ENST00000489131 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.41
TOP3A-206ENST00000489131 ANKARQ7Z5J8 1434 aa17.58■□□□□ 0.41
TOP3A-206ENST00000489131 ADGRL3Q9HAR2 1447 aa17.58■□□□□ 0.41
TOP3A-206ENST00000489131 RALBP1Q15311 655 aa17.58■□□□□ 0.4
TOP3A-206ENST00000489131 AMER1Q5JTC6 1135 aaPredicted RBP17.58■□□□□ 0.4
TOP3A-206ENST00000489131 SLC12A5Q9H2X9 1139 aa17.57■□□□□ 0.4
TOP3A-206ENST00000489131 ITSN1Q15811 1721 aa17.57■□□□□ 0.4
TOP3A-206ENST00000489131 CPSF1Q10570 1443 aaKnown RBP17.56■□□□□ 0.4
TOP3A-206ENST00000489131 STRCP1A6NGW2 1772 aa17.56■□□□□ 0.4
TOP3A-206ENST00000489131 CARD14Q9BXL6 1004 aa17.56■□□□□ 0.4
TOP3A-206ENST00000489131 KNSTRNQ9Y448 316 aa17.55■□□□□ 0.4
TOP3A-206ENST00000489131 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
TOP3A-206ENST00000489131 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
TOP3A-206ENST00000489131 NSD2O96028 1365 aa17.54■□□□□ 0.4
TOP3A-206ENST00000489131 AKAP12Q02952 1782 aa17.54■□□□□ 0.4
TOP3A-206ENST00000489131 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
TOP3A-206ENST00000489131 PRR36Q9H6K5 1346 aa17.53■□□□□ 0.4
TOP3A-206ENST00000489131 MON2Q7Z3U7 1717 aa17.53■□□□□ 0.4
TOP3A-206ENST00000489131 NUDT16Q96DE0 195 aaKnown RBP17.53■□□□□ 0.4
TOP3A-206ENST00000489131 TERF2IPQ9NYB0 399 aa17.53■□□□□ 0.4
TOP3A-206ENST00000489131 NSD3Q9BZ95 1437 aa17.53■□□□□ 0.4
TOP3A-206ENST00000489131 TMC1Q8TDI8 760 aa17.52■□□□□ 0.4
TOP3A-206ENST00000489131 PLEKHG3A1L390 1219 aa17.51■□□□□ 0.39
TOP3A-206ENST00000489131 DCCP43146 1447 aa17.51■□□□□ 0.39
TOP3A-206ENST00000489131 MYBBP1AQ9BQG0 1328 aaKnown RBP17.5■□□□□ 0.39
TOP3A-206ENST00000489131 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
TOP3A-206ENST00000489131 ANKRD26Q9UPS8 1709 aa17.5■□□□□ 0.39
TOP3A-206ENST00000489131 NRKQ7Z2Y5 1582 aa17.49■□□□□ 0.39
TOP3A-206ENST00000489131 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
TOP3A-206ENST00000489131 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
TOP3A-206ENST00000489131 EDC4Q6P2E9 1401 aaKnown RBP17.48■□□□□ 0.39
TOP3A-206ENST00000489131 HDGFL2Q7Z4V5 671 aaPredicted RBP17.48■□□□□ 0.39
TOP3A-206ENST00000489131 POLR3AO14802 1390 aaPredicted RBP17.48■□□□□ 0.39
TOP3A-206ENST00000489131 BRD4O60885 1362 aaPredicted RBP17.48■□□□□ 0.39
TOP3A-206ENST00000489131 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
TOP3A-206ENST00000489131 KIF20BQ96Q89 1820 aa17.46■□□□□ 0.39
TOP3A-206ENST00000489131 NLRP13Q86W25 1043 aa17.45■□□□□ 0.38
TOP3A-206ENST00000489131 RGPD8O14715 1765 aaPredicted RBP17.45■□□□□ 0.38
TOP3A-206ENST00000489131 SSH2Q76I76 1423 aa17.45■□□□□ 0.38
TOP3A-206ENST00000489131 XIRP1Q702N8 1843 aaKnown RBP17.44■□□□□ 0.38
TOP3A-206ENST00000489131 TMEM94Q12767 1356 aa17.44■□□□□ 0.38
TOP3A-206ENST00000489131 CC2D1BQ5T0F9 858 aaKnown RBP17.44■□□□□ 0.38
TOP3A-206ENST00000489131 PROSER2Q86WR7 435 aaPredicted RBP17.44■□□□□ 0.38
TOP3A-206ENST00000489131 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
TOP3A-206ENST00000489131 C19orf44Q9H6X5 657 aa17.43■□□□□ 0.38
TOP3A-206ENST00000489131 USP6P35125 1406 aa17.43■□□□□ 0.38
TOP3A-206ENST00000489131 KIF1AQ12756 1690 aa17.4■□□□□ 0.38
TOP3A-206ENST00000489131 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
TOP3A-206ENST00000489131 ACEP12821 1306 aa17.4■□□□□ 0.38
TOP3A-206ENST00000489131 FYB1O15117 783 aa17.39■□□□□ 0.37
TOP3A-206ENST00000489131 PPP2R1AP30153 589 aa17.39■□□□□ 0.37
TOP3A-206ENST00000489131 CCDC184Q52MB2 194 aa17.39■□□□□ 0.37
TOP3A-206ENST00000489131 SCAF1Q9H7N4 1312 aaKnown RBP17.39■□□□□ 0.37
TOP3A-206ENST00000489131 INSRP06213 1382 aa17.39■□□□□ 0.37
TOP3A-206ENST00000489131 MST1RQ04912 1400 aa17.38■□□□□ 0.37
TOP3A-206ENST00000489131 MRS2Q9HD23 443 aa17.38■□□□□ 0.37
TOP3A-206ENST00000489131 C1orf167Q5SNV9 1468 aa17.37■□□□□ 0.37
TOP3A-206ENST00000489131 ZNF335Q9H4Z2 1342 aaPredicted RBP17.37■□□□□ 0.37
TOP3A-206ENST00000489131 TTC21AQ8NDW8 1320 aa17.36■□□□□ 0.37
TOP3A-206ENST00000489131 PNISRQ8TF01 805 aaKnown RBP17.35■□□□□ 0.37
TOP3A-206ENST00000489131 MSH6P52701 1360 aa17.35■□□□□ 0.37
TOP3A-206ENST00000489131 OVOS2A0A0J9YW53 1432 aa17.34■□□□□ 0.37
TOP3A-206ENST00000489131 OVOS2Q6IE36 1432 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms