RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 TSPOAP1O95153 1857 aa18.31■□□□□ 0.52
RER1-207ENST00000488353 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
RER1-207ENST00000488353 DUSP27Q5VZP5 1158 aa18.3■□□□□ 0.52
RER1-207ENST00000488353 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
RER1-207ENST00000488353 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.29■□□□□ 0.52
RER1-207ENST00000488353 DIP2BQ9P265 1576 aa18.29■□□□□ 0.52
RER1-207ENST00000488353 SYNMO15061 1565 aa18.29■□□□□ 0.52
RER1-207ENST00000488353 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
RER1-207ENST00000488353 PKNOX2Q96KN3 472 aa18.28■□□□□ 0.52
RER1-207ENST00000488353 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
RER1-207ENST00000488353 PPLO60437 1756 aa18.28■□□□□ 0.52
RER1-207ENST00000488353 POGKQ9P215 609 aa18.28■□□□□ 0.52
RER1-207ENST00000488353 ERVK-7P63135 1459 aa18.28■□□□□ 0.52
RER1-207ENST00000488353 MYOM1P52179 1685 aa18.27■□□□□ 0.52
RER1-207ENST00000488353 RGS3P49796 1198 aa18.27■□□□□ 0.52
RER1-207ENST00000488353 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.52
RER1-207ENST00000488353 IDI1Q13907 227 aa18.27■□□□□ 0.51
RER1-207ENST00000488353 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
RER1-207ENST00000488353 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
RER1-207ENST00000488353 KDM5AP29375 1690 aaKnown RBP18.25■□□□□ 0.51
RER1-207ENST00000488353 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
RER1-207ENST00000488353 BECN1Q14457 450 aa18.25■□□□□ 0.51
RER1-207ENST00000488353 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
RER1-207ENST00000488353 APAF1O14727 1248 aa18.24■□□□□ 0.51
RER1-207ENST00000488353 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
RER1-207ENST00000488353 SPINK5Q9NQ38 1064 aaPredicted RBP18.23■□□□□ 0.51
RER1-207ENST00000488353 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
RER1-207ENST00000488353 SLFN5Q08AF3 891 aa18.23■□□□□ 0.51
RER1-207ENST00000488353 FBXO31Q5XUX0 539 aaPredicted RBP18.23■□□□□ 0.51
RER1-207ENST00000488353 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
RER1-207ENST00000488353 VIRMAQ69YN4 1812 aaKnown RBP18.22■□□□□ 0.51
RER1-207ENST00000488353 ADGRB1O14514 1584 aa18.22■□□□□ 0.51
RER1-207ENST00000488353 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
RER1-207ENST00000488353 ZC3H13Q5T200 1668 aaKnown RBP18.2■□□□□ 0.5
RER1-207ENST00000488353 USP19O94966 1318 aa18.2■□□□□ 0.5
RER1-207ENST00000488353 NEXMIFQ5QGS0 1516 aa18.2■□□□□ 0.5
RER1-207ENST00000488353 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
RER1-207ENST00000488353 CARD14Q9BXL6 1004 aa18.2■□□□□ 0.5
RER1-207ENST00000488353 MYO3AQ8NEV4 1616 aa18.19■□□□□ 0.5
RER1-207ENST00000488353 BCAR3O75815 825 aa18.18■□□□□ 0.5
RER1-207ENST00000488353 MLECQ14165 292 aa18.18■□□□□ 0.5
RER1-207ENST00000488353 SLC24A1O60721 1099 aa18.17■□□□□ 0.5
RER1-207ENST00000488353 SLC52A1Q9NWF4 448 aa18.17■□□□□ 0.5
RER1-207ENST00000488353 SBNO2Q9Y2G9 1366 aa18.17■□□□□ 0.5
RER1-207ENST00000488353 PNNQ9H307 717 aaKnown RBP18.16■□□□□ 0.5
RER1-207ENST00000488353 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
RER1-207ENST00000488353 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
RER1-207ENST00000488353 CLCN1P35523 988 aa18.16■□□□□ 0.5
RER1-207ENST00000488353 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
RER1-207ENST00000488353 MYO5BQ9ULV0 1848 aa18.16■□□□□ 0.5
RER1-207ENST00000488353 QRICH2Q9H0J4 1663 aa18.16■□□□□ 0.5
RER1-207ENST00000488353 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
RER1-207ENST00000488353 NAP1L5Q96NT1 182 aaPredicted RBP18.15■□□□□ 0.5
RER1-207ENST00000488353 SLC12A5Q9H2X9 1139 aa18.15■□□□□ 0.5
RER1-207ENST00000488353 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
RER1-207ENST00000488353 TNNT2P45379 298 aaPredicted RBP18.14■□□□□ 0.5
RER1-207ENST00000488353 TRMT2AQ8IZ69 625 aaKnown RBP18.14■□□□□ 0.5
RER1-207ENST00000488353 STK26Q9P289 416 aa18.14■□□□□ 0.5
RER1-207ENST00000488353 RRP9O43818 475 aaKnown RBP18.14■□□□□ 0.49
RER1-207ENST00000488353 ANTXR1Q9H6X2 564 aa18.14■□□□□ 0.49
RER1-207ENST00000488353 GOLGA6L3A6NEY3 463 aa18.13■□□□□ 0.49
RER1-207ENST00000488353 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
RER1-207ENST00000488353 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
RER1-207ENST00000488353 XRCC6P12956 609 aaKnown RBP eCLIP18.13■□□□□ 0.49
RER1-207ENST00000488353 HSP90AA1P07900 732 aaKnown RBP18.12■□□□□ 0.49
RER1-207ENST00000488353 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
RER1-207ENST00000488353 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
RER1-207ENST00000488353 ZMYND15Q9H091 742 aa18.11■□□□□ 0.49
RER1-207ENST00000488353 NKTRP30414 1462 aaKnown RBP18.11■□□□□ 0.49
RER1-207ENST00000488353 TMEM131LA2VDJ0 1609 aa18.11■□□□□ 0.49
RER1-207ENST00000488353 FSD2A1L4K1 749 aa18.11■□□□□ 0.49
RER1-207ENST00000488353 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
RER1-207ENST00000488353 E9PSI1 815 aa18.1■□□□□ 0.49
RER1-207ENST00000488353 SEC24BO95487 1268 aa18.1■□□□□ 0.49
RER1-207ENST00000488353 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
RER1-207ENST00000488353 IGHDP01880 384 aa18.09■□□□□ 0.49
RER1-207ENST00000488353 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.49
RER1-207ENST00000488353 UPF2Q9HAU5 1272 aaKnown RBP18.08■□□□□ 0.48
RER1-207ENST00000488353 CABP2Q9NPB3 220 aa18.08■□□□□ 0.48
RER1-207ENST00000488353 RRP7AQ9Y3A4 280 aaKnown RBP18.08■□□□□ 0.48
RER1-207ENST00000488353 CLTCQ00610 1675 aaKnown RBP18.07■□□□□ 0.48
RER1-207ENST00000488353 MORC1Q86VD1 984 aa18.07■□□□□ 0.48
RER1-207ENST00000488353 CGNL1Q0VF96 1302 aa18.06■□□□□ 0.48
RER1-207ENST00000488353 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
RER1-207ENST00000488353 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
RER1-207ENST00000488353 NLRP1Q9C000 1473 aa18.06■□□□□ 0.48
RER1-207ENST00000488353 TULP4Q9NRJ4 1543 aa18.06■□□□□ 0.48
RER1-207ENST00000488353 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
RER1-207ENST00000488353 WWC1Q8IX03 1113 aa18.06■□□□□ 0.48
RER1-207ENST00000488353 EVC2Q86UK5 1308 aa18.05■□□□□ 0.48
RER1-207ENST00000488353 AGLP35573 1532 aa18.05■□□□□ 0.48
RER1-207ENST00000488353 PANK1Q8TE04 598 aa18.05■□□□□ 0.48
RER1-207ENST00000488353 REREQ9P2R6 1566 aa18.04■□□□□ 0.48
RER1-207ENST00000488353 PDE3AQ14432 1141 aa18.04■□□□□ 0.48
RER1-207ENST00000488353 COG6Q9Y2V7 657 aa18.04■□□□□ 0.48
RER1-207ENST00000488353 MCM4P33991 863 aa18.04■□□□□ 0.48
RER1-207ENST00000488353 ARXQ96QS3 562 aa18.04■□□□□ 0.48
RER1-207ENST00000488353 TBC1D2Q9BYX2 928 aa18.03■□□□□ 0.48
RER1-207ENST00000488353 MRE11P49959 708 aa18.03■□□□□ 0.48
RER1-207ENST00000488353 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms