RNA–Protein interactions for RNA: ENST00000488085.1

PSMD2-216, Transcript of proteasome 26S subunit, non-ATPase 2, humanhuman

TSL 4

Gene PSMD2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD2-216ENST00000488085 SIRT1Q96EB6 747 aa12.89□□□□□ -0.35
PSMD2-216ENST00000488085 C1orf167Q5SNV9 1468 aa12.89□□□□□ -0.35
PSMD2-216ENST00000488085 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
PSMD2-216ENST00000488085 JCADQ9P266 1359 aa12.86□□□□□ -0.35
PSMD2-216ENST00000488085 PLEKHH1Q9ULM0 1364 aa12.86□□□□□ -0.35
PSMD2-216ENST00000488085 DCAF11Q8TEB1 546 aa12.86□□□□□ -0.35
PSMD2-216ENST00000488085 WAPLQ7Z5K2 1190 aa12.85□□□□□ -0.35
PSMD2-216ENST00000488085 STK26Q9P289 416 aa12.85□□□□□ -0.35
PSMD2-216ENST00000488085 ADGRB2O60241 1585 aa12.85□□□□□ -0.35
PSMD2-216ENST00000488085 KIF1AQ12756 1690 aa12.83□□□□□ -0.35
PSMD2-216ENST00000488085 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
PSMD2-216ENST00000488085 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
PSMD2-216ENST00000488085 LRP6O75581 1613 aa12.81□□□□□ -0.36
PSMD2-216ENST00000488085 TRIM26Q12899 539 aaPredicted RBP12.81□□□□□ -0.36
PSMD2-216ENST00000488085 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
PSMD2-216ENST00000488085 SPATA31A6Q5VVP1 1343 aa12.81□□□□□ -0.36
PSMD2-216ENST00000488085 COL22A1Q8NFW1 1626 aaPredicted RBP12.8□□□□□ -0.36
PSMD2-216ENST00000488085 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
PSMD2-216ENST00000488085 SOS2Q07890 1332 aaPredicted RBP12.8□□□□□ -0.36
PSMD2-216ENST00000488085 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
PSMD2-216ENST00000488085 MARF1Q9Y4F3 1742 aaKnown RBP12.79□□□□□ -0.36
PSMD2-216ENST00000488085 PXDNQ92626 1479 aa12.79□□□□□ -0.36
PSMD2-216ENST00000488085 DDX17Q92841 729 aaKnown RBP12.79□□□□□ -0.36
PSMD2-216ENST00000488085 LRRC59Q96AG4 307 aaKnown RBP12.78□□□□□ -0.36
PSMD2-216ENST00000488085 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
PSMD2-216ENST00000488085 ITSN1Q15811 1721 aa12.78□□□□□ -0.36
PSMD2-216ENST00000488085 PHF23Q9BUL5 403 aaPredicted RBP12.77□□□□□ -0.37
PSMD2-216ENST00000488085 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.37
PSMD2-216ENST00000488085 PNPLA6Q8IY17 1366 aa12.77□□□□□ -0.37
PSMD2-216ENST00000488085 L3MBTL2Q969R5 705 aa12.76□□□□□ -0.37
PSMD2-216ENST00000488085 SIN3AQ96ST3 1273 aa12.76□□□□□ -0.37
PSMD2-216ENST00000488085 ESCO1Q5FWF5 840 aa12.75□□□□□ -0.37
PSMD2-216ENST00000488085 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
PSMD2-216ENST00000488085 ANKARQ7Z5J8 1434 aa12.75□□□□□ -0.37
PSMD2-216ENST00000488085 POGKQ9P215 609 aa12.75□□□□□ -0.37
PSMD2-216ENST00000488085 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
PSMD2-216ENST00000488085 QRICH2Q9H0J4 1663 aa12.74□□□□□ -0.37
PSMD2-216ENST00000488085 TULP4Q9NRJ4 1543 aa12.74□□□□□ -0.37
PSMD2-216ENST00000488085 SAFB2Q14151 953 aaKnown RBP eCLIP12.74□□□□□ -0.37
PSMD2-216ENST00000488085 TOPAZ1Q8N9V7 1692 aa12.73□□□□□ -0.37
PSMD2-216ENST00000488085 NUTM2FA1L443 756 aa12.73□□□□□ -0.37
PSMD2-216ENST00000488085 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
PSMD2-216ENST00000488085 ABCA3Q99758 1704 aa12.72□□□□□ -0.37
PSMD2-216ENST00000488085 FOXO3O43524 673 aa12.72□□□□□ -0.37
PSMD2-216ENST00000488085 ALS2Q96Q42 1657 aa12.71□□□□□ -0.37
PSMD2-216ENST00000488085 POTEAQ6S8J7 498 aa12.71□□□□□ -0.37
PSMD2-216ENST00000488085 EIF3AQ14152 1382 aaKnown RBP12.7□□□□□ -0.38
PSMD2-216ENST00000488085 MINK1Q8N4C8 1332 aaPredicted RBP12.7□□□□□ -0.38
PSMD2-216ENST00000488085 WASLO00401 505 aaPredicted RBP12.7□□□□□ -0.38
PSMD2-216ENST00000488085 NEUROD1Q13562 356 aa12.7□□□□□ -0.38
PSMD2-216ENST00000488085 HIRIP3Q9BW71 556 aaPredicted RBP12.7□□□□□ -0.38
PSMD2-216ENST00000488085 PHF8Q9UPP1 1060 aa12.7□□□□□ -0.38
PSMD2-216ENST00000488085 ATP7BP35670 1465 aa12.7□□□□□ -0.38
PSMD2-216ENST00000488085 PRR36Q9H6K5 1346 aa12.69□□□□□ -0.38
PSMD2-216ENST00000488085 CRYBG1Q9Y4K1 1723 aa12.68□□□□□ -0.38
PSMD2-216ENST00000488085 NUTM2BA6NNL0 878 aaPredicted RBP12.68□□□□□ -0.38
PSMD2-216ENST00000488085 NUTM2EB1AL46 878 aaPredicted RBP12.68□□□□□ -0.38
PSMD2-216ENST00000488085 NUTM2AQ8IVF1 878 aaPredicted RBP12.68□□□□□ -0.38
PSMD2-216ENST00000488085 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.68□□□□□ -0.38
PSMD2-216ENST00000488085 SPATA31A3Q5VYP0 1347 aa12.67□□□□□ -0.38
PSMD2-216ENST00000488085 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
PSMD2-216ENST00000488085 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
PSMD2-216ENST00000488085 SBNO1A3KN83 1393 aa12.67□□□□□ -0.38
PSMD2-216ENST00000488085 TNS3Q68CZ2 1445 aa12.66□□□□□ -0.38
PSMD2-216ENST00000488085 NBPF8Q3BBV2 869 aa12.66□□□□□ -0.38
PSMD2-216ENST00000488085 ZNF772Q68DY9 489 aaPredicted RBP12.66□□□□□ -0.38
PSMD2-216ENST00000488085 KRT28Q7Z3Y7 464 aa12.66□□□□□ -0.38
PSMD2-216ENST00000488085 GPRASP1Q5JY77 1395 aa12.66□□□□□ -0.38
PSMD2-216ENST00000488085 AFF2P51816 1311 aa12.64□□□□□ -0.39
PSMD2-216ENST00000488085 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
PSMD2-216ENST00000488085 PSME1Q06323 249 aa12.64□□□□□ -0.39
PSMD2-216ENST00000488085 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
PSMD2-216ENST00000488085 CDK19Q9BWU1 502 aa12.64□□□□□ -0.39
PSMD2-216ENST00000488085 NWD2Q9ULI1 1742 aa12.64□□□□□ -0.39
PSMD2-216ENST00000488085 RALGAPBQ86X10 1494 aa12.64□□□□□ -0.39
PSMD2-216ENST00000488085 NUDT16Q96DE0 195 aaKnown RBP12.63□□□□□ -0.39
PSMD2-216ENST00000488085 C8orf37Q96NL8 207 aa12.63□□□□□ -0.39
PSMD2-216ENST00000488085 ROCK2O75116 1388 aaKnown RBP12.63□□□□□ -0.39
PSMD2-216ENST00000488085 PLCH1Q4KWH8 1693 aa12.63□□□□□ -0.39
PSMD2-216ENST00000488085 AKAP12Q02952 1782 aa12.62□□□□□ -0.39
PSMD2-216ENST00000488085 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
PSMD2-216ENST00000488085 ARHGEF10O15013 1369 aa12.62□□□□□ -0.39
PSMD2-216ENST00000488085 TONSLQ96HA7 1378 aa12.62□□□□□ -0.39
PSMD2-216ENST00000488085 ADAMTS2O95450 1211 aa12.62□□□□□ -0.39
PSMD2-216ENST00000488085 FNBP4Q8N3X1 1017 aaPredicted RBP12.62□□□□□ -0.39
PSMD2-216ENST00000488085 CDK12Q9NYV4 1490 aaPredicted RBP12.61□□□□□ -0.39
PSMD2-216ENST00000488085 PHRF1Q9P1Y6 1649 aaKnown RBP12.61□□□□□ -0.39
PSMD2-216ENST00000488085 PLEKHG3A1L390 1219 aa12.6□□□□□ -0.39
PSMD2-216ENST00000488085 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
PSMD2-216ENST00000488085 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
PSMD2-216ENST00000488085 SLIT2O94813 1529 aa12.59□□□□□ -0.39
PSMD2-216ENST00000488085 NGLY1Q96IV0 654 aa12.59□□□□□ -0.39
PSMD2-216ENST00000488085 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
PSMD2-216ENST00000488085 SBNO2Q9Y2G9 1366 aa12.58□□□□□ -0.4
PSMD2-216ENST00000488085 ATRNO75882 1429 aa12.58□□□□□ -0.4
PSMD2-216ENST00000488085 RXRBP28702 533 aa12.58□□□□□ -0.4
PSMD2-216ENST00000488085 NGDNQ8NEJ9 315 aaKnown RBP12.58□□□□□ -0.4
PSMD2-216ENST00000488085 QTRT2Q9H974 415 aaKnown RBP12.58□□□□□ -0.4
PSMD2-216ENST00000488085 COL14A1Q05707 1796 aaKnown RBP12.58□□□□□ -0.4
PSMD2-216ENST00000488085 CLSPNQ9HAW4 1339 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms