RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 NINLQ9Y2I6 1382 aa12.34□□□□□ -0.43
RTCB-205ENST00000487704 VPS72Q15906 364 aa12.34□□□□□ -0.43
RTCB-205ENST00000487704 MYOM3Q5VTT5 1437 aa12.33□□□□□ -0.44
RTCB-205ENST00000487704 GCC2Q8IWJ2 1684 aa12.32□□□□□ -0.44
RTCB-205ENST00000487704 PPP1R1BQ9UD71 204 aaPredicted RBP12.3□□□□□ -0.44
RTCB-205ENST00000487704 NPHP3Q7Z494 1330 aa12.3□□□□□ -0.44
RTCB-205ENST00000487704 UTRNP46939 3433 aa12.29□□□□□ -0.44
RTCB-205ENST00000487704 CHGAP10645 457 aaKnown RBP12.29□□□□□ -0.44
RTCB-205ENST00000487704 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
RTCB-205ENST00000487704 CAMKK2Q96RR4 588 aa12.29□□□□□ -0.44
RTCB-205ENST00000487704 SPON1Q9HCB6 807 aa12.29□□□□□ -0.44
RTCB-205ENST00000487704 METP08581 1390 aa12.29□□□□□ -0.44
RTCB-205ENST00000487704 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
RTCB-205ENST00000487704 PXDNQ92626 1479 aa12.27□□□□□ -0.45
RTCB-205ENST00000487704 RGPD1P0DJD0 1748 aa12.26□□□□□ -0.45
RTCB-205ENST00000487704 KCNQ2O43526 872 aa12.26□□□□□ -0.45
RTCB-205ENST00000487704 PARD3Q8TEW0 1356 aa12.26□□□□□ -0.45
RTCB-205ENST00000487704 ABCC5O15440 1437 aa12.26□□□□□ -0.45
RTCB-205ENST00000487704 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
RTCB-205ENST00000487704 NRXN3Q9Y4C0 1643 aa12.24□□□□□ -0.45
RTCB-205ENST00000487704 FOXO3O43524 673 aa12.23□□□□□ -0.45
RTCB-205ENST00000487704 NBPF8Q3BBV2 869 aa12.23□□□□□ -0.45
RTCB-205ENST00000487704 NBPF14Q5TI25 921 aa12.23□□□□□ -0.45
RTCB-205ENST00000487704 PTPN23Q9H3S7 1636 aa12.22□□□□□ -0.45
RTCB-205ENST00000487704 ADGRL2O95490 1459 aa12.22□□□□□ -0.45
RTCB-205ENST00000487704 LRPPRCP42704 1394 aaKnown RBP12.22□□□□□ -0.45
RTCB-205ENST00000487704 ESCO1Q5FWF5 840 aa12.22□□□□□ -0.45
RTCB-205ENST00000487704 ANKRD30AQ9BXX3 1397 aa12.21□□□□□ -0.45
RTCB-205ENST00000487704 SPATA31A3Q5VYP0 1347 aa12.21□□□□□ -0.45
RTCB-205ENST00000487704 A0A0G2JS52 829 aa12.21□□□□□ -0.45
RTCB-205ENST00000487704 MYT1Q01538 1121 aa12.21□□□□□ -0.45
RTCB-205ENST00000487704 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.45
RTCB-205ENST00000487704 CAMTA1Q9Y6Y1 1673 aa12.21□□□□□ -0.45
RTCB-205ENST00000487704 TNS1Q9HBL0 1735 aaKnown RBP12.2□□□□□ -0.46
RTCB-205ENST00000487704 USP32Q8NFA0 1604 aa12.2□□□□□ -0.46
RTCB-205ENST00000487704 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
RTCB-205ENST00000487704 FAM182BQ5T319 152 aa12.2□□□□□ -0.46
RTCB-205ENST00000487704 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
RTCB-205ENST00000487704 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
RTCB-205ENST00000487704 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
RTCB-205ENST00000487704 APBA3O96018 575 aa12.18□□□□□ -0.46
RTCB-205ENST00000487704 DAPK1P53355 1430 aa12.18□□□□□ -0.46
RTCB-205ENST00000487704 ADGRB2O60241 1585 aa12.18□□□□□ -0.46
RTCB-205ENST00000487704 TRIM37O94972 964 aa12.17□□□□□ -0.46
RTCB-205ENST00000487704 FAM196AQ6ZSG2 479 aa12.17□□□□□ -0.46
RTCB-205ENST00000487704 ROBO2Q9HCK4 1378 aa12.17□□□□□ -0.46
RTCB-205ENST00000487704 CHD4Q14839 1912 aa12.16□□□□□ -0.46
RTCB-205ENST00000487704 FAM83GA6ND36 823 aa12.16□□□□□ -0.46
RTCB-205ENST00000487704 PRAG1Q86YV5 1406 aa12.16□□□□□ -0.46
RTCB-205ENST00000487704 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
RTCB-205ENST00000487704 IQGAP3Q86VI3 1631 aa12.15□□□□□ -0.47
RTCB-205ENST00000487704 CHIC2Q9UKJ5 165 aa12.14□□□□□ -0.47
RTCB-205ENST00000487704 PLCH1Q4KWH8 1693 aa12.13□□□□□ -0.47
RTCB-205ENST00000487704 RREB1Q92766 1687 aa12.13□□□□□ -0.47
RTCB-205ENST00000487704 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
RTCB-205ENST00000487704 CABLES1Q8TDN4 633 aa12.12□□□□□ -0.47
RTCB-205ENST00000487704 SPATA31A5Q5VU36 1347 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 SPATA31A7Q8IWB4 1347 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 CCDC144AA2RUR9 1427 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 SYT17Q9BSW7 474 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 ANKRD50Q9ULJ7 1429 aa12.11□□□□□ -0.47
RTCB-205ENST00000487704 CDC42BPGQ6DT37 1551 aa12.1□□□□□ -0.47
RTCB-205ENST00000487704 BTG4Q9NY30 223 aa12.1□□□□□ -0.47
RTCB-205ENST00000487704 E9PCH4 1651 aa12.1□□□□□ -0.47
RTCB-205ENST00000487704 THSD7AQ9UPZ6 1657 aa12.1□□□□□ -0.47
RTCB-205ENST00000487704 PTGER2P43116 358 aa12.09□□□□□ -0.47
RTCB-205ENST00000487704 ZNF326Q5BKZ1 582 aaKnown RBP12.09□□□□□ -0.47
RTCB-205ENST00000487704 KANK4Q5T7N3 995 aaPredicted RBP12.09□□□□□ -0.47
RTCB-205ENST00000487704 PSME1Q06323 249 aa12.08□□□□□ -0.48
RTCB-205ENST00000487704 NEXMIFQ5QGS0 1516 aa12.07□□□□□ -0.48
RTCB-205ENST00000487704 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
RTCB-205ENST00000487704 NRKQ7Z2Y5 1582 aa12.07□□□□□ -0.48
RTCB-205ENST00000487704 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
RTCB-205ENST00000487704 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
RTCB-205ENST00000487704 SBNO1A3KN83 1393 aa12.05□□□□□ -0.48
RTCB-205ENST00000487704 ARHGEF10O15013 1369 aa12.05□□□□□ -0.48
RTCB-205ENST00000487704 NUTM2FA1L443 756 aa12.04□□□□□ -0.48
RTCB-205ENST00000487704 HSPA6P17066 643 aa12.04□□□□□ -0.48
RTCB-205ENST00000487704 NAIPQ13075 1403 aa12.03□□□□□ -0.48
RTCB-205ENST00000487704 RRBP1Q9P2E9 1410 aaKnown RBP12.03□□□□□ -0.48
RTCB-205ENST00000487704 CASZ1Q86V15 1759 aa12.03□□□□□ -0.48
RTCB-205ENST00000487704 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
RTCB-205ENST00000487704 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
RTCB-205ENST00000487704 SLC34A2O95436 690 aa12.03□□□□□ -0.48
RTCB-205ENST00000487704 PDGFDQ9GZP0 370 aaPredicted RBP12.03□□□□□ -0.48
RTCB-205ENST00000487704 SPATA31A1Q5TZJ5 1347 aa12.03□□□□□ -0.48
RTCB-205ENST00000487704 MYOM1P52179 1685 aa12.03□□□□□ -0.48
RTCB-205ENST00000487704 PLSCR1O15162 318 aa12.02□□□□□ -0.49
RTCB-205ENST00000487704 KIF1AQ12756 1690 aa12.02□□□□□ -0.49
RTCB-205ENST00000487704 ABCA3Q99758 1704 aa12.01□□□□□ -0.49
RTCB-205ENST00000487704 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
RTCB-205ENST00000487704 PDE3BQ13370 1112 aa12.01□□□□□ -0.49
RTCB-205ENST00000487704 SGIP1Q9BQI5 828 aa12.01□□□□□ -0.49
RTCB-205ENST00000487704 ANO8Q9HCE9 1232 aaPredicted RBP12.01□□□□□ -0.49
RTCB-205ENST00000487704 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
RTCB-205ENST00000487704 MAP3K5Q99683 1374 aa12.01□□□□□ -0.49
RTCB-205ENST00000487704 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
RTCB-205ENST00000487704 COL14A1Q05707 1796 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms