RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 METP08581 1390 aa12.94□□□□□ -0.34
PRKCB-208ENST00000487674 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
PRKCB-208ENST00000487674 SPATA31A6Q5VVP1 1343 aa12.93□□□□□ -0.34
PRKCB-208ENST00000487674 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
PRKCB-208ENST00000487674 ADGRL3Q9HAR2 1447 aa12.93□□□□□ -0.34
PRKCB-208ENST00000487674 SETD1AO15047 1707 aaKnown RBP12.93□□□□□ -0.34
PRKCB-208ENST00000487674 MST1RQ04912 1400 aa12.92□□□□□ -0.34
PRKCB-208ENST00000487674 BRINP3Q76B58 766 aa12.91□□□□□ -0.34
PRKCB-208ENST00000487674 PTCH1Q13635 1447 aa12.9□□□□□ -0.34
PRKCB-208ENST00000487674 PPLO60437 1756 aa12.89□□□□□ -0.35
PRKCB-208ENST00000487674 PRAG1Q86YV5 1406 aa12.89□□□□□ -0.35
PRKCB-208ENST00000487674 HAX1O00165 279 aa12.89□□□□□ -0.35
PRKCB-208ENST00000487674 SETD5Q9C0A6 1442 aa12.88□□□□□ -0.35
PRKCB-208ENST00000487674 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
PRKCB-208ENST00000487674 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
PRKCB-208ENST00000487674 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
PRKCB-208ENST00000487674 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
PRKCB-208ENST00000487674 TRIM52Q96A61 297 aa12.87□□□□□ -0.35
PRKCB-208ENST00000487674 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-208ENST00000487674 MKRN4PQ13434 485 aaPredicted RBP12.86□□□□□ -0.35
PRKCB-208ENST00000487674 LAMC1P11047 1609 aa12.86□□□□□ -0.35
PRKCB-208ENST00000487674 RPGRIP1LQ68CZ1 1315 aa12.86□□□□□ -0.35
PRKCB-208ENST00000487674 ZNF772Q68DY9 489 aaPredicted RBP12.85□□□□□ -0.35
PRKCB-208ENST00000487674 ROBO2Q9HCK4 1378 aa12.84□□□□□ -0.35
PRKCB-208ENST00000487674 C1orf167Q5SNV9 1468 aa12.83□□□□□ -0.36
PRKCB-208ENST00000487674 PNPLA6Q8IY17 1366 aa12.82□□□□□ -0.36
PRKCB-208ENST00000487674 IFT172Q9UG01 1749 aa12.82□□□□□ -0.36
PRKCB-208ENST00000487674 CCDC144AA2RUR9 1427 aa12.82□□□□□ -0.36
PRKCB-208ENST00000487674 LRRC59Q96AG4 307 aaKnown RBP12.82□□□□□ -0.36
PRKCB-208ENST00000487674 CDC42BPGQ6DT37 1551 aa12.81□□□□□ -0.36
PRKCB-208ENST00000487674 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
PRKCB-208ENST00000487674 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-208ENST00000487674 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-208ENST00000487674 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-208ENST00000487674 SPATA31E1Q6ZUB1 1445 aa12.79□□□□□ -0.36
PRKCB-208ENST00000487674 KNDC1Q76NI1 1749 aa12.79□□□□□ -0.36
PRKCB-208ENST00000487674 EVX2Q03828 476 aa12.78□□□□□ -0.36
PRKCB-208ENST00000487674 DDX17Q92841 729 aaKnown RBP12.78□□□□□ -0.36
PRKCB-208ENST00000487674 AFF2P51816 1311 aa12.78□□□□□ -0.36
PRKCB-208ENST00000487674 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
PRKCB-208ENST00000487674 TECPR2O15040 1411 aa12.78□□□□□ -0.36
PRKCB-208ENST00000487674 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.36
PRKCB-208ENST00000487674 RXRBP28702 533 aa12.77□□□□□ -0.37
PRKCB-208ENST00000487674 SOS2Q07890 1332 aaPredicted RBP12.76□□□□□ -0.37
PRKCB-208ENST00000487674 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
PRKCB-208ENST00000487674 ADGRF5Q8IZF2 1346 aa12.75□□□□□ -0.37
PRKCB-208ENST00000487674 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
PRKCB-208ENST00000487674 ORAI2Q96SN7 254 aa12.75□□□□□ -0.37
PRKCB-208ENST00000487674 LRPPRCP42704 1394 aaKnown RBP12.74□□□□□ -0.37
PRKCB-208ENST00000487674 MPHOSPH9Q99550 1183 aa12.74□□□□□ -0.37
PRKCB-208ENST00000487674 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
PRKCB-208ENST00000487674 PXDNQ92626 1479 aa12.73□□□□□ -0.37
PRKCB-208ENST00000487674 RGS12O14924 1447 aa12.73□□□□□ -0.37
PRKCB-208ENST00000487674 ACIN1Q9UKV3 1341 aaKnown RBP12.73□□□□□ -0.37
PRKCB-208ENST00000487674 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
PRKCB-208ENST00000487674 FMN2Q9NZ56 1722 aa12.73□□□□□ -0.37
PRKCB-208ENST00000487674 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
PRKCB-208ENST00000487674 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
PRKCB-208ENST00000487674 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
PRKCB-208ENST00000487674 UPF1Q92900 1129 aaKnown RBP eCLIP12.72□□□□□ -0.37
PRKCB-208ENST00000487674 MYOM2P54296 1465 aa12.72□□□□□ -0.37
PRKCB-208ENST00000487674 KIF1AQ12756 1690 aa12.71□□□□□ -0.37
PRKCB-208ENST00000487674 ADAMTS2O95450 1211 aa12.71□□□□□ -0.37
PRKCB-208ENST00000487674 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
PRKCB-208ENST00000487674 NRXN1Q9ULB1 1477 aa12.71□□□□□ -0.38
PRKCB-208ENST00000487674 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.38
PRKCB-208ENST00000487674 YTHDC2Q9H6S0 1430 aaKnown RBP12.71□□□□□ -0.38
PRKCB-208ENST00000487674 PRKAR2AP13861 404 aaKnown RBP12.7□□□□□ -0.38
PRKCB-208ENST00000487674 RBM6P78332 1123 aaKnown RBP12.7□□□□□ -0.38
PRKCB-208ENST00000487674 SPDYE1Q8NFV5 336 aaPredicted RBP12.7□□□□□ -0.38
PRKCB-208ENST00000487674 ESCO1Q5FWF5 840 aa12.69□□□□□ -0.38
PRKCB-208ENST00000487674 NGLY1Q96IV0 654 aa12.69□□□□□ -0.38
PRKCB-208ENST00000487674 QTRT2Q9H974 415 aaKnown RBP12.69□□□□□ -0.38
PRKCB-208ENST00000487674 STK26Q9P289 416 aa12.69□□□□□ -0.38
PRKCB-208ENST00000487674 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
PRKCB-208ENST00000487674 TMEM132EQ6IEE7 984 aa12.67□□□□□ -0.38
PRKCB-208ENST00000487674 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
PRKCB-208ENST00000487674 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.66□□□□□ -0.38
PRKCB-208ENST00000487674 ATRNO75882 1429 aa12.66□□□□□ -0.38
PRKCB-208ENST00000487674 FNBP4Q8N3X1 1017 aaPredicted RBP12.66□□□□□ -0.38
PRKCB-208ENST00000487674 USP21Q9UK80 565 aa12.66□□□□□ -0.38
PRKCB-208ENST00000487674 FOXO3O43524 673 aa12.65□□□□□ -0.38
PRKCB-208ENST00000487674 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
PRKCB-208ENST00000487674 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
PRKCB-208ENST00000487674 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
PRKCB-208ENST00000487674 DLC1Q96QB1 1528 aa12.65□□□□□ -0.38
PRKCB-208ENST00000487674 RAB3GAP2Q9H2M9 1393 aa12.65□□□□□ -0.38
PRKCB-208ENST00000487674 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
PRKCB-208ENST00000487674 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
PRKCB-208ENST00000487674 DHX57Q6P158 1386 aaKnown RBP12.64□□□□□ -0.39
PRKCB-208ENST00000487674 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
PRKCB-208ENST00000487674 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
PRKCB-208ENST00000487674 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
PRKCB-208ENST00000487674 USP32Q8NFA0 1604 aa12.63□□□□□ -0.39
PRKCB-208ENST00000487674 BCL9LQ86UU0 1499 aa12.63□□□□□ -0.39
PRKCB-208ENST00000487674 ADGRB1O14514 1584 aa12.62□□□□□ -0.39
PRKCB-208ENST00000487674 SPATA31A3Q5VYP0 1347 aa12.62□□□□□ -0.39
PRKCB-208ENST00000487674 CFAP70Q5T0N1 1121 aa12.61□□□□□ -0.39
PRKCB-208ENST00000487674 ABCA3Q99758 1704 aa12.61□□□□□ -0.39
PRKCB-208ENST00000487674 TNS3Q68CZ2 1445 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms