RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 A0A0G2JS52 829 aa19.36■□□□□ 0.69
ATPAF1-205ENST00000487193 MYT1Q01538 1121 aa19.36■□□□□ 0.69
ATPAF1-205ENST00000487193 XPCQ01831 940 aaPredicted RBP19.36■□□□□ 0.69
ATPAF1-205ENST00000487193 METP08581 1390 aa19.35■□□□□ 0.69
ATPAF1-205ENST00000487193 CROCC2H7BZ55 1655 aa19.35■□□□□ 0.69
ATPAF1-205ENST00000487193 RPRD2Q5VT52 1461 aaKnown RBP19.35■□□□□ 0.69
ATPAF1-205ENST00000487193 ZNF784Q8NCA9 323 aaPredicted RBP19.34■□□□□ 0.69
ATPAF1-205ENST00000487193 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.68
ATPAF1-205ENST00000487193 SLIT2O94813 1529 aa19.33■□□□□ 0.68
ATPAF1-205ENST00000487193 EZH2Q15910 746 aaKnown RBP19.32■□□□□ 0.68
ATPAF1-205ENST00000487193 ONECUT3O60422 494 aaPredicted RBP19.31■□□□□ 0.68
ATPAF1-205ENST00000487193 FAM182BQ5T319 152 aa19.31■□□□□ 0.68
ATPAF1-205ENST00000487193 NRXN3Q9Y4C0 1643 aa19.3■□□□□ 0.68
ATPAF1-205ENST00000487193 C1QTNF8P60827 252 aa19.3■□□□□ 0.68
ATPAF1-205ENST00000487193 VPS72Q15906 364 aa19.3■□□□□ 0.68
ATPAF1-205ENST00000487193 ESCO1Q5FWF5 840 aa19.3■□□□□ 0.68
ATPAF1-205ENST00000487193 ANKRD30AQ9BXX3 1397 aa19.29■□□□□ 0.68
ATPAF1-205ENST00000487193 NPHP3Q7Z494 1330 aa19.28■□□□□ 0.68
ATPAF1-205ENST00000487193 DAPK1P53355 1430 aa19.27■□□□□ 0.68
ATPAF1-205ENST00000487193 FOXO3O43524 673 aa19.27■□□□□ 0.68
ATPAF1-205ENST00000487193 RGPD1P0DJD0 1748 aa19.26■□□□□ 0.67
ATPAF1-205ENST00000487193 PLEKHG5O94827 1062 aa19.26■□□□□ 0.67
ATPAF1-205ENST00000487193 KANK4Q5T7N3 995 aaPredicted RBP19.26■□□□□ 0.67
ATPAF1-205ENST00000487193 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
ATPAF1-205ENST00000487193 PXDNQ92626 1479 aa19.25■□□□□ 0.67
ATPAF1-205ENST00000487193 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
ATPAF1-205ENST00000487193 HAP1P54257 671 aaPredicted RBP19.23■□□□□ 0.67
ATPAF1-205ENST00000487193 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
ATPAF1-205ENST00000487193 CAMKK2Q96RR4 588 aa19.21■□□□□ 0.67
ATPAF1-205ENST00000487193 SPON1Q9HCB6 807 aa19.21■□□□□ 0.67
ATPAF1-205ENST00000487193 PTPN23Q9H3S7 1636 aa19.19■□□□□ 0.66
ATPAF1-205ENST00000487193 CABLES1Q8TDN4 633 aa19.18■□□□□ 0.66
ATPAF1-205ENST00000487193 USP32Q8NFA0 1604 aa19.18■□□□□ 0.66
ATPAF1-205ENST00000487193 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
ATPAF1-205ENST00000487193 NINLQ9Y2I6 1382 aa19.18■□□□□ 0.66
ATPAF1-205ENST00000487193 E9PCH4 1651 aa19.17■□□□□ 0.66
ATPAF1-205ENST00000487193 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
ATPAF1-205ENST00000487193 KCNQ2O43526 872 aa19.17■□□□□ 0.66
ATPAF1-205ENST00000487193 TNS1Q9HBL0 1735 aaKnown RBP19.17■□□□□ 0.66
ATPAF1-205ENST00000487193 DISP2A7MBM2 1401 aa19.17■□□□□ 0.66
ATPAF1-205ENST00000487193 TRIM37O94972 964 aa19.16■□□□□ 0.66
ATPAF1-205ENST00000487193 PLCH1Q4KWH8 1693 aa19.16■□□□□ 0.66
ATPAF1-205ENST00000487193 ADGRL2O95490 1459 aa19.16■□□□□ 0.66
ATPAF1-205ENST00000487193 APBA3O96018 575 aa19.15■□□□□ 0.66
ATPAF1-205ENST00000487193 NBPF8Q3BBV2 869 aa19.15■□□□□ 0.66
ATPAF1-205ENST00000487193 NBPF14Q5TI25 921 aa19.15■□□□□ 0.66
ATPAF1-205ENST00000487193 SPATA31A3Q5VYP0 1347 aa19.15■□□□□ 0.66
ATPAF1-205ENST00000487193 LRPPRCP42704 1394 aaKnown RBP19.15■□□□□ 0.66
ATPAF1-205ENST00000487193 NWD2Q9ULI1 1742 aa19.13■□□□□ 0.65
ATPAF1-205ENST00000487193 ANKRD50Q9ULJ7 1429 aa19.12■□□□□ 0.65
ATPAF1-205ENST00000487193 FAM83GA6ND36 823 aa19.11■□□□□ 0.65
ATPAF1-205ENST00000487193 IQGAP3Q86VI3 1631 aa19.11■□□□□ 0.65
ATPAF1-205ENST00000487193 KRT28Q7Z3Y7 464 aa19.1■□□□□ 0.65
ATPAF1-205ENST00000487193 LMOD2Q6P5Q4 547 aa19.08■□□□□ 0.64
ATPAF1-205ENST00000487193 ADGRB2O60241 1585 aa19.06■□□□□ 0.64
ATPAF1-205ENST00000487193 BTG4Q9NY30 223 aa19.06■□□□□ 0.64
ATPAF1-205ENST00000487193 UTRNP46939 3433 aa19.05■□□□□ 0.64
ATPAF1-205ENST00000487193 NUP188Q5SRE5 1749 aa19.05■□□□□ 0.64
ATPAF1-205ENST00000487193 PARD3Q8TEW0 1356 aa19.05■□□□□ 0.64
ATPAF1-205ENST00000487193 HFM1A2PYH4 1435 aa19.04■□□□□ 0.64
ATPAF1-205ENST00000487193 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
ATPAF1-205ENST00000487193 CHD4Q14839 1912 aa19.04■□□□□ 0.64
ATPAF1-205ENST00000487193 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
ATPAF1-205ENST00000487193 RREB1Q92766 1687 aa19.03■□□□□ 0.64
ATPAF1-205ENST00000487193 CEP350Q5VT06 3117 aa19.02■□□□□ 0.64
ATPAF1-205ENST00000487193 NRAPQ86VF7 1730 aa19■□□□□ 0.63
ATPAF1-205ENST00000487193 CDC42BPGQ6DT37 1551 aa19■□□□□ 0.63
ATPAF1-205ENST00000487193 NEXMIFQ5QGS0 1516 aa19■□□□□ 0.63
ATPAF1-205ENST00000487193 CCDC144AA2RUR9 1427 aa19■□□□□ 0.63
ATPAF1-205ENST00000487193 SPATA31A5Q5VU36 1347 aa19■□□□□ 0.63
ATPAF1-205ENST00000487193 SPATA31A7Q8IWB4 1347 aa19■□□□□ 0.63
ATPAF1-205ENST00000487193 PSME1Q06323 249 aa18.99■□□□□ 0.63
ATPAF1-205ENST00000487193 NAIPQ13075 1403 aa18.98■□□□□ 0.63
ATPAF1-205ENST00000487193 TNS3Q68CZ2 1445 aa18.98■□□□□ 0.63
ATPAF1-205ENST00000487193 NRKQ7Z2Y5 1582 aa18.97■□□□□ 0.63
ATPAF1-205ENST00000487193 WAPLQ7Z5K2 1190 aa18.96■□□□□ 0.63
ATPAF1-205ENST00000487193 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
ATPAF1-205ENST00000487193 ABCA3Q99758 1704 aa18.96■□□□□ 0.63
ATPAF1-205ENST00000487193 THSD7AQ9UPZ6 1657 aa18.95■□□□□ 0.62
ATPAF1-205ENST00000487193 FAM50AQ14320 339 aaKnown RBP18.95■□□□□ 0.62
ATPAF1-205ENST00000487193 NUP155O75694 1391 aa18.94■□□□□ 0.62
ATPAF1-205ENST00000487193 ZBTB7AO95365 584 aa18.94■□□□□ 0.62
ATPAF1-205ENST00000487193 SYT17Q9BSW7 474 aa18.94■□□□□ 0.62
ATPAF1-205ENST00000487193 ATF5Q9Y2D1 282 aaPredicted RBP18.94■□□□□ 0.62
ATPAF1-205ENST00000487193 VGFO15240 615 aaPredicted RBP18.93■□□□□ 0.62
ATPAF1-205ENST00000487193 FHDC1Q9C0D6 1143 aaPredicted RBP18.93■□□□□ 0.62
ATPAF1-205ENST00000487193 PDGFDQ9GZP0 370 aaPredicted RBP18.93■□□□□ 0.62
ATPAF1-205ENST00000487193 MYOM1P52179 1685 aa18.92■□□□□ 0.62
ATPAF1-205ENST00000487193 KIF1AQ12756 1690 aa18.92■□□□□ 0.62
ATPAF1-205ENST00000487193 STK26Q9P289 416 aa18.92■□□□□ 0.62
ATPAF1-205ENST00000487193 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
ATPAF1-205ENST00000487193 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
ATPAF1-205ENST00000487193 PDE3BQ13370 1112 aa18.9■□□□□ 0.62
ATPAF1-205ENST00000487193 COL14A1Q05707 1796 aaKnown RBP18.89■□□□□ 0.61
ATPAF1-205ENST00000487193 PTGER2P43116 358 aa18.89■□□□□ 0.61
ATPAF1-205ENST00000487193 ARHGEF10O15013 1369 aa18.89■□□□□ 0.61
ATPAF1-205ENST00000487193 RGPD8O14715 1765 aaPredicted RBP18.88■□□□□ 0.61
ATPAF1-205ENST00000487193 SBNO1A3KN83 1393 aa18.87■□□□□ 0.61
ATPAF1-205ENST00000487193 SPATA31A1Q5TZJ5 1347 aa18.87■□□□□ 0.61
ATPAF1-205ENST00000487193 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms