RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-223ENST00000486991 QTRT2Q9H974 415 aaKnown RBP19.15■□□□□ 0.66
NR1H3-223ENST00000486991 ADGRF5Q8IZF2 1346 aa19.14■□□□□ 0.65
NR1H3-223ENST00000486991 PIK3C2GO75747 1445 aa19.14■□□□□ 0.65
NR1H3-223ENST00000486991 PTCH1Q13635 1447 aa19.14■□□□□ 0.65
NR1H3-223ENST00000486991 NRXN1Q9ULB1 1477 aa19.14■□□□□ 0.65
NR1H3-223ENST00000486991 KNDC1Q76NI1 1749 aa19.12■□□□□ 0.65
NR1H3-223ENST00000486991 MYOM2P54296 1465 aa19.12■□□□□ 0.65
NR1H3-223ENST00000486991 RGS12O14924 1447 aa19.11■□□□□ 0.65
NR1H3-223ENST00000486991 NGLY1Q96IV0 654 aa19.11■□□□□ 0.65
NR1H3-223ENST00000486991 SOS2Q07890 1332 aaPredicted RBP19.1■□□□□ 0.65
NR1H3-223ENST00000486991 RGL3Q3MIN7 710 aa19.1■□□□□ 0.65
NR1H3-223ENST00000486991 CDK12Q9NYV4 1490 aaPredicted RBP19.09■□□□□ 0.65
NR1H3-223ENST00000486991 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
NR1H3-223ENST00000486991 STK26Q9P289 416 aa19.09■□□□□ 0.65
NR1H3-223ENST00000486991 LAMC1P11047 1609 aa19.08■□□□□ 0.65
NR1H3-223ENST00000486991 NUTM2FA1L443 756 aa19.08■□□□□ 0.64
NR1H3-223ENST00000486991 RBM6P78332 1123 aaKnown RBP19.08■□□□□ 0.64
NR1H3-223ENST00000486991 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
NR1H3-223ENST00000486991 WAPLQ7Z5K2 1190 aa19.07■□□□□ 0.64
NR1H3-223ENST00000486991 TECPR2O15040 1411 aa19.07■□□□□ 0.64
NR1H3-223ENST00000486991 ESCO1Q5FWF5 840 aa19.06■□□□□ 0.64
NR1H3-223ENST00000486991 TMEM132EQ6IEE7 984 aa19.05■□□□□ 0.64
NR1H3-223ENST00000486991 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
NR1H3-223ENST00000486991 USP21Q9UK80 565 aa19.04■□□□□ 0.64
NR1H3-223ENST00000486991 FOXO3O43524 673 aa19.03■□□□□ 0.64
NR1H3-223ENST00000486991 PLEKHH1Q9ULM0 1364 aa19.03■□□□□ 0.64
NR1H3-223ENST00000486991 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
NR1H3-223ENST00000486991 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
NR1H3-223ENST00000486991 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
NR1H3-223ENST00000486991 PXDNQ92626 1479 aa19■□□□□ 0.63
NR1H3-223ENST00000486991 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
NR1H3-223ENST00000486991 FNBP4Q8N3X1 1017 aaPredicted RBP18.99■□□□□ 0.63
NR1H3-223ENST00000486991 YTHDC2Q9H6S0 1430 aaKnown RBP18.99■□□□□ 0.63
NR1H3-223ENST00000486991 ABCC11Q96J66 1382 aa18.98■□□□□ 0.63
NR1H3-223ENST00000486991 TRPC5Q9UL62 973 aaPredicted RBP18.98■□□□□ 0.63
NR1H3-223ENST00000486991 NPHP3Q7Z494 1330 aa18.98■□□□□ 0.63
NR1H3-223ENST00000486991 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
NR1H3-223ENST00000486991 ATRNO75882 1429 aa18.97■□□□□ 0.63
NR1H3-223ENST00000486991 FMN2Q9NZ56 1722 aa18.95■□□□□ 0.62
NR1H3-223ENST00000486991 PLEKHG5O94827 1062 aa18.94■□□□□ 0.62
NR1H3-223ENST00000486991 CFAP70Q5T0N1 1121 aa18.94■□□□□ 0.62
NR1H3-223ENST00000486991 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
NR1H3-223ENST00000486991 DLC1Q96QB1 1528 aa18.93■□□□□ 0.62
NR1H3-223ENST00000486991 EP400Q96L91 3159 aa18.92■□□□□ 0.62
NR1H3-223ENST00000486991 MARF1Q9Y4F3 1742 aaKnown RBP18.92■□□□□ 0.62
NR1H3-223ENST00000486991 ATAD2Q6PL18 1390 aa18.92■□□□□ 0.62
NR1H3-223ENST00000486991 SRCAPQ6ZRS2 3230 aa18.91■□□□□ 0.62
NR1H3-223ENST00000486991 KIAA1210Q9ULL0 1709 aa18.91■□□□□ 0.62
NR1H3-223ENST00000486991 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
NR1H3-223ENST00000486991 SAFB2Q14151 953 aaKnown RBP eCLIP18.9■□□□□ 0.62
NR1H3-223ENST00000486991 KRT28Q7Z3Y7 464 aa18.9■□□□□ 0.62
NR1H3-223ENST00000486991 ARHGEF28Q8N1W1 1705 aaKnown RBP18.9■□□□□ 0.62
NR1H3-223ENST00000486991 SPATA31A3Q5VYP0 1347 aa18.89■□□□□ 0.61
NR1H3-223ENST00000486991 CLSPNQ9HAW4 1339 aa18.89■□□□□ 0.61
NR1H3-223ENST00000486991 ADGRB2O60241 1585 aa18.89■□□□□ 0.61
NR1H3-223ENST00000486991 CABLES1Q8TDN4 633 aa18.88■□□□□ 0.61
NR1H3-223ENST00000486991 DCAF11Q8TEB1 546 aa18.88■□□□□ 0.61
NR1H3-223ENST00000486991 GJD4Q96KN9 370 aaPredicted RBP18.88■□□□□ 0.61
NR1H3-223ENST00000486991 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
NR1H3-223ENST00000486991 NEUROD1Q13562 356 aa18.87■□□□□ 0.61
NR1H3-223ENST00000486991 SIRT1Q96EB6 747 aa18.87■□□□□ 0.61
NR1H3-223ENST00000486991 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
NR1H3-223ENST00000486991 STAC3Q96MF2 364 aa18.85■□□□□ 0.61
NR1H3-223ENST00000486991 PRAM1Q96QH2 718 aa18.85■□□□□ 0.61
NR1H3-223ENST00000486991 PHF8Q9UPP1 1060 aa18.85■□□□□ 0.61
NR1H3-223ENST00000486991 KDM2AQ9Y2K7 1162 aa18.85■□□□□ 0.61
NR1H3-223ENST00000486991 UNC5CLQ8IV45 518 aa18.84■□□□□ 0.61
NR1H3-223ENST00000486991 KIF1AQ12756 1690 aa18.84■□□□□ 0.61
NR1H3-223ENST00000486991 GLI3P10071 1580 aa18.84■□□□□ 0.61
NR1H3-223ENST00000486991 SLIT2O94813 1529 aa18.83■□□□□ 0.6
NR1H3-223ENST00000486991 RALGAPBQ86X10 1494 aa18.83■□□□□ 0.6
NR1H3-223ENST00000486991 LMOD2Q6P5Q4 547 aa18.82■□□□□ 0.6
NR1H3-223ENST00000486991 PMFBP1Q8TBY8 1022 aa18.82■□□□□ 0.6
NR1H3-223ENST00000486991 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.8■□□□□ 0.6
NR1H3-223ENST00000486991 HAP1P54257 671 aaPredicted RBP18.8■□□□□ 0.6
NR1H3-223ENST00000486991 TNS3Q68CZ2 1445 aa18.8■□□□□ 0.6
NR1H3-223ENST00000486991 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
NR1H3-223ENST00000486991 POGKQ9P215 609 aa18.79■□□□□ 0.6
NR1H3-223ENST00000486991 BRWD3Q6RI45 1802 aa18.79■□□□□ 0.6
NR1H3-223ENST00000486991 PSME1Q06323 249 aa18.78■□□□□ 0.6
NR1H3-223ENST00000486991 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
NR1H3-223ENST00000486991 ZRANB1Q9UGI0 708 aa18.77■□□□□ 0.6
NR1H3-223ENST00000486991 TRAK1Q9UPV9 953 aa18.77■□□□□ 0.6
NR1H3-223ENST00000486991 SEPT12Q8IYM1 358 aa18.76■□□□□ 0.59
NR1H3-223ENST00000486991 PLCH1Q4KWH8 1693 aa18.76■□□□□ 0.59
NR1H3-223ENST00000486991 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
NR1H3-223ENST00000486991 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
NR1H3-223ENST00000486991 DEFB132Q7Z7B7 95 aa18.75■□□□□ 0.59
NR1H3-223ENST00000486991 CCDC9Q9Y3X0 531 aaKnown RBP18.75■□□□□ 0.59
NR1H3-223ENST00000486991 TONSLQ96HA7 1378 aa18.75■□□□□ 0.59
NR1H3-223ENST00000486991 MINK1Q8N4C8 1332 aaPredicted RBP18.74■□□□□ 0.59
NR1H3-223ENST00000486991 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
NR1H3-223ENST00000486991 CCDC125Q86Z20 511 aa18.74■□□□□ 0.59
NR1H3-223ENST00000486991 ANKARQ7Z5J8 1434 aa18.74■□□□□ 0.59
NR1H3-223ENST00000486991 PRR36Q9H6K5 1346 aa18.74■□□□□ 0.59
NR1H3-223ENST00000486991 VPS72Q15906 364 aa18.73■□□□□ 0.59
NR1H3-223ENST00000486991 L3MBTL2Q969R5 705 aa18.73■□□□□ 0.59
NR1H3-223ENST00000486991 TULP4Q9NRJ4 1543 aa18.73■□□□□ 0.59
NR1H3-223ENST00000486991 NBPF1Q3BBV0 1214 aa18.72■□□□□ 0.59
NR1H3-223ENST00000486991 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms