RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 PBRM1Q86U86 1689 aa16.9■□□□□ 0.3
PKD1-219ENST00000486339 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
PKD1-219ENST00000486339 C11orf95C9JLR9 678 aaPredicted RBP16.89■□□□□ 0.29
PKD1-219ENST00000486339 FKBP5Q13451 457 aaPredicted RBP16.89■□□□□ 0.29
PKD1-219ENST00000486339 FAM135AQ9P2D6 1515 aa16.89■□□□□ 0.29
PKD1-219ENST00000486339 NOS1P29475 1434 aa16.89■□□□□ 0.29
PKD1-219ENST00000486339 GAS2L2Q8NHY3 880 aa16.88■□□□□ 0.29
PKD1-219ENST00000486339 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
PKD1-219ENST00000486339 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
PKD1-219ENST00000486339 MFAP1P55081 439 aaKnown RBP16.88■□□□□ 0.29
PKD1-219ENST00000486339 ZRSR1Q15695 479 aaKnown RBP16.88■□□□□ 0.29
PKD1-219ENST00000486339 SULT6B1Q6IMI4 303 aa16.87■□□□□ 0.29
PKD1-219ENST00000486339 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
PKD1-219ENST00000486339 NSD3Q9BZ95 1437 aa16.87■□□□□ 0.29
PKD1-219ENST00000486339 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
PKD1-219ENST00000486339 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
PKD1-219ENST00000486339 DDX58O95786 925 aaKnown RBP16.86■□□□□ 0.29
PKD1-219ENST00000486339 SPRYD3Q8NCJ5 442 aa16.86■□□□□ 0.29
PKD1-219ENST00000486339 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
PKD1-219ENST00000486339 CCDC184Q52MB2 194 aa16.85■□□□□ 0.29
PKD1-219ENST00000486339 AMOTL2Q9Y2J4 779 aa16.85■□□□□ 0.29
PKD1-219ENST00000486339 ABCC10Q5T3U5 1492 aa16.85■□□□□ 0.29
PKD1-219ENST00000486339 USP35Q9P2H5 1018 aa16.84■□□□□ 0.29
PKD1-219ENST00000486339 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
PKD1-219ENST00000486339 PLEKHO1Q53GL0 409 aaPredicted RBP16.84■□□□□ 0.29
PKD1-219ENST00000486339 MEX3CQ5U5Q3 659 aaKnown RBP16.84■□□□□ 0.29
PKD1-219ENST00000486339 CFAP43Q8NDM7 1665 aa16.84■□□□□ 0.29
PKD1-219ENST00000486339 RRS1Q15050 365 aaKnown RBP16.83■□□□□ 0.28
PKD1-219ENST00000486339 TARBP1Q13395 1621 aaKnown RBP16.83■□□□□ 0.28
PKD1-219ENST00000486339 SCAF11Q99590 1463 aaKnown RBP16.82■□□□□ 0.28
PKD1-219ENST00000486339 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
PKD1-219ENST00000486339 TNRQ92752 1358 aa16.81■□□□□ 0.28
PKD1-219ENST00000486339 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
PKD1-219ENST00000486339 SMG6Q86US8 1419 aaKnown RBP16.81■□□□□ 0.28
PKD1-219ENST00000486339 EXOSC9Q06265 439 aaKnown RBP16.8■□□□□ 0.28
PKD1-219ENST00000486339 WASLO00401 505 aaPredicted RBP16.8■□□□□ 0.28
PKD1-219ENST00000486339 STRN4Q9NRL3 753 aa16.8■□□□□ 0.28
PKD1-219ENST00000486339 PANK1Q8TE04 598 aa16.8■□□□□ 0.28
PKD1-219ENST00000486339 TSHZ2Q9NRE2 1034 aa16.79■□□□□ 0.28
PKD1-219ENST00000486339 PRDM11Q9NQV5 511 aa16.79■□□□□ 0.28
PKD1-219ENST00000486339 GOLGA6L4A6NEF3 574 aa16.78■□□□□ 0.28
PKD1-219ENST00000486339 TATP17735 454 aaPredicted RBP16.78■□□□□ 0.28
PKD1-219ENST00000486339 SHANK2Q9UPX8 1470 aa16.77■□□□□ 0.28
PKD1-219ENST00000486339 SLKQ9H2G2 1235 aaPredicted RBP16.77■□□□□ 0.28
PKD1-219ENST00000486339 FRAT2O75474 233 aaPredicted RBP16.77■□□□□ 0.28
PKD1-219ENST00000486339 TSR2Q969E8 191 aaKnown RBP16.77■□□□□ 0.28
PKD1-219ENST00000486339 TRIM44Q96DX7 344 aaPredicted RBP16.77■□□□□ 0.28
PKD1-219ENST00000486339 SAMD9Q5K651 1589 aa16.76■□□□□ 0.27
PKD1-219ENST00000486339 MAPKBP1O60336 1514 aa16.76■□□□□ 0.27
PKD1-219ENST00000486339 TWISTNBQ3B726 338 aaPredicted RBP16.76■□□□□ 0.27
PKD1-219ENST00000486339 ZNF530Q6P9A1 599 aaPredicted RBP16.76■□□□□ 0.27
PKD1-219ENST00000486339 RBM33Q96EV2 1170 aaKnown RBP16.76■□□□□ 0.27
PKD1-219ENST00000486339 FCHSD2O94868 740 aa16.76■□□□□ 0.27
PKD1-219ENST00000486339 AIMP1Q12904 312 aaKnown RBP16.76■□□□□ 0.27
PKD1-219ENST00000486339 RILPL2Q969X0 211 aa16.76■□□□□ 0.27
PKD1-219ENST00000486339 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
PKD1-219ENST00000486339 TOM1L2Q6ZVM7 507 aa16.75■□□□□ 0.27
PKD1-219ENST00000486339 UHRF1BP1LA0JNW5 1464 aa16.75■□□□□ 0.27
PKD1-219ENST00000486339 NME9Q86XW9 330 aa16.75■□□□□ 0.27
PKD1-219ENST00000486339 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
PKD1-219ENST00000486339 PHF8Q9UPP1 1060 aa16.75■□□□□ 0.27
PKD1-219ENST00000486339 ZC3H6P61129 1189 aaKnown RBP16.75■□□□□ 0.27
PKD1-219ENST00000486339 RIC3Q7Z5B4 369 aa16.75■□□□□ 0.27
PKD1-219ENST00000486339 PDE4AP27815 886 aa16.74■□□□□ 0.27
PKD1-219ENST00000486339 AAMPQ13685 434 aa16.74■□□□□ 0.27
PKD1-219ENST00000486339 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
PKD1-219ENST00000486339 WDR63Q8IWG1 891 aa16.74■□□□□ 0.27
PKD1-219ENST00000486339 FOXO3O43524 673 aa16.73■□□□□ 0.27
PKD1-219ENST00000486339 KCNH5Q8NCM2 988 aa16.73■□□□□ 0.27
PKD1-219ENST00000486339 MSH5O43196 834 aa16.72■□□□□ 0.27
PKD1-219ENST00000486339 G3V3G9 751 aa16.72■□□□□ 0.27
PKD1-219ENST00000486339 DCAF8Q5TAQ9 597 aa16.72■□□□□ 0.27
PKD1-219ENST00000486339 DISP3Q9P2K9 1392 aa16.71■□□□□ 0.27
PKD1-219ENST00000486339 PTMAP06454 111 aaKnown RBP16.71■□□□□ 0.27
PKD1-219ENST00000486339 G3BP1Q13283 466 aaKnown RBP eCLIP16.7■□□□□ 0.26
PKD1-219ENST00000486339 UBTFL1P0CB47 393 aaPredicted RBP16.7■□□□□ 0.26
PKD1-219ENST00000486339 HDGFL1Q5TGJ6 251 aa16.7■□□□□ 0.26
PKD1-219ENST00000486339 LNPKQ9C0E8 428 aa16.7■□□□□ 0.26
PKD1-219ENST00000486339 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 IFIT2P09913 472 aaKnown RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 IPO9Q96P70 1041 aaKnown RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 PLCB2Q00722 1185 aa16.69■□□□□ 0.26
PKD1-219ENST00000486339 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
PKD1-219ENST00000486339 NFE2L2Q16236 605 aa16.69■□□□□ 0.26
PKD1-219ENST00000486339 BCAR3O75815 825 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 HSP90AB4PQ58FF6 505 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 DDX54Q8TDD1 881 aaKnown RBP16.68■□□□□ 0.26
PKD1-219ENST00000486339 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
PKD1-219ENST00000486339 CT47B1P0C2W7 299 aaPredicted RBP16.68■□□□□ 0.26
PKD1-219ENST00000486339 EMILIN1Q9Y6C2 1016 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 RALGAPBQ86X10 1494 aa16.68■□□□□ 0.26
PKD1-219ENST00000486339 GNAI3P08754 354 aa16.67■□□□□ 0.26
PKD1-219ENST00000486339 GBP4Q96PP9 640 aa16.67■□□□□ 0.26
PKD1-219ENST00000486339 DIAPH3Q9NSV4 1193 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms