RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PXDNQ92626 1479 aa15.33■□□□□ 0.04
PTPN7-213ENST00000486116 SLIT2O94813 1529 aa15.33■□□□□ 0.04
PTPN7-213ENST00000486116 VPS8Q8N3P4 1428 aa15.32■□□□□ 0.04
PTPN7-213ENST00000486116 YY1P25490 414 aa15.31■□□□□ 0.04
PTPN7-213ENST00000486116 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
PTPN7-213ENST00000486116 PLCH1Q4KWH8 1693 aa15.3■□□□□ 0.04
PTPN7-213ENST00000486116 USP32Q8NFA0 1604 aa15.29■□□□□ 0.04
PTPN7-213ENST00000486116 ANKRD50Q9ULJ7 1429 aa15.29■□□□□ 0.04
PTPN7-213ENST00000486116 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
PTPN7-213ENST00000486116 TNS1Q9HBL0 1735 aaKnown RBP15.28■□□□□ 0.04
PTPN7-213ENST00000486116 NWD2Q9ULI1 1742 aa15.27■□□□□ 0.04
PTPN7-213ENST00000486116 SEPT12Q8IYM1 358 aa15.27■□□□□ 0.04
PTPN7-213ENST00000486116 NEXMIFQ5QGS0 1516 aa15.25■□□□□ 0.03
PTPN7-213ENST00000486116 ABCA3Q99758 1704 aa15.24■□□□□ 0.03
PTPN7-213ENST00000486116 BAG6P46379 1132 aa15.24■□□□□ 0.03
PTPN7-213ENST00000486116 R3HDM1Q15032 1099 aaKnown RBP15.24■□□□□ 0.03
PTPN7-213ENST00000486116 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
PTPN7-213ENST00000486116 CDC42BPGQ6DT37 1551 aa15.23■□□□□ 0.03
PTPN7-213ENST00000486116 NPHP3Q7Z494 1330 aa15.22■□□□□ 0.03
PTPN7-213ENST00000486116 XPCQ01831 940 aaPredicted RBP15.22■□□□□ 0.03
PTPN7-213ENST00000486116 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
PTPN7-213ENST00000486116 PRAG1Q86YV5 1406 aa15.21■□□□□ 0.03
PTPN7-213ENST00000486116 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
PTPN7-213ENST00000486116 NRAPQ86VF7 1730 aa15.2■□□□□ 0.02
PTPN7-213ENST00000486116 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
PTPN7-213ENST00000486116 CAMTA1Q9Y6Y1 1673 aa15.19■□□□□ 0.02
PTPN7-213ENST00000486116 VPS72Q15906 364 aa15.19■□□□□ 0.02
PTPN7-213ENST00000486116 IFFO2Q5TF58 517 aa15.19■□□□□ 0.02
PTPN7-213ENST00000486116 DISP2A7MBM2 1401 aa15.17■□□□□ 0.02
PTPN7-213ENST00000486116 CLTCL1P53675 1640 aa15.17■□□□□ 0.02
PTPN7-213ENST00000486116 RREB1Q92766 1687 aa15.17■□□□□ 0.02
PTPN7-213ENST00000486116 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
PTPN7-213ENST00000486116 KIF1BO60333 1816 aa15.17■□□□□ 0.02
PTPN7-213ENST00000486116 FOXO3O43524 673 aa15.16■□□□□ 0.02
PTPN7-213ENST00000486116 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
PTPN7-213ENST00000486116 NUP188Q5SRE5 1749 aa15.16■□□□□ 0.02
PTPN7-213ENST00000486116 KIF1AQ12756 1690 aa15.16■□□□□ 0.02
PTPN7-213ENST00000486116 HFM1A2PYH4 1435 aa15.15■□□□□ 0.02
PTPN7-213ENST00000486116 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
PTPN7-213ENST00000486116 SPATA31A3Q5VYP0 1347 aa15.14■□□□□ 0.01
PTPN7-213ENST00000486116 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
PTPN7-213ENST00000486116 ADGRB2O60241 1585 aa15.13■□□□□ 0.01
PTPN7-213ENST00000486116 CCDC9Q9Y3X0 531 aaKnown RBP15.13■□□□□ 0.01
PTPN7-213ENST00000486116 THSD7AQ9UPZ6 1657 aa15.12■□□□□ 0.01
PTPN7-213ENST00000486116 LRPPRCP42704 1394 aaKnown RBP15.12■□□□□ 0.01
PTPN7-213ENST00000486116 EZH2Q15910 746 aaKnown RBP15.12■□□□□ 0.01
PTPN7-213ENST00000486116 FAM182BQ5T319 152 aa15.11■□□□□ 0.01
PTPN7-213ENST00000486116 A0A0G2JS52 829 aa15.1■□□□□ 0.01
PTPN7-213ENST00000486116 MYT1Q01538 1121 aa15.1■□□□□ 0.01
PTPN7-213ENST00000486116 NAIPQ13075 1403 aa15.09■□□□□ 0.01
PTPN7-213ENST00000486116 PPLO60437 1756 aa15.09■□□□□ 0.01
PTPN7-213ENST00000486116 FAM98CQ17RN3 349 aaKnown RBP15.09■□□□□ 0.01
PTPN7-213ENST00000486116 NUP155O75694 1391 aa15.09■□□□□ 0.01
PTPN7-213ENST00000486116 CCDC144AA2RUR9 1427 aa15.09■□□□□ 0.01
PTPN7-213ENST00000486116 SENP3-EIF4A1A0A087X0R7 540 aa15.08■□□□□ 0
PTPN7-213ENST00000486116 CABLES1Q8TDN4 633 aa15.08■□□□□ 0
PTPN7-213ENST00000486116 CAMKK2Q96RR4 588 aa15.08■□□□□ 0
PTPN7-213ENST00000486116 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
PTPN7-213ENST00000486116 IFT172Q9UG01 1749 aa15.07■□□□□ 0
PTPN7-213ENST00000486116 NUTM2FA1L443 756 aa15.07■□□□□ 0
PTPN7-213ENST00000486116 COL14A1Q05707 1796 aaKnown RBP15.06■□□□□ 0
PTPN7-213ENST00000486116 FAM50AQ14320 339 aaKnown RBP15.06■□□□□ 0
PTPN7-213ENST00000486116 NINLQ9Y2I6 1382 aa15.06■□□□□ 0
PTPN7-213ENST00000486116 CHD4Q14839 1912 aa15.05■□□□□ 0
PTPN7-213ENST00000486116 HAP1P54257 671 aaPredicted RBP15.05■□□□□ -0
PTPN7-213ENST00000486116 ZNF784Q8NCA9 323 aaPredicted RBP15.05■□□□□ -0
PTPN7-213ENST00000486116 KNDC1Q76NI1 1749 aa15.04■□□□□ -0
PTPN7-213ENST00000486116 FAM83GA6ND36 823 aa15.03■□□□□ -0
PTPN7-213ENST00000486116 PLEKHG5O94827 1062 aa15.03■□□□□ -0
PTPN7-213ENST00000486116 KRT28Q7Z3Y7 464 aa15.03■□□□□ -0
PTPN7-213ENST00000486116 ROCK1Q13464 1354 aa15.02■□□□□ -0
PTPN7-213ENST00000486116 PARD3Q8TEW0 1356 aa15.02■□□□□ -0
PTPN7-213ENST00000486116 DCAF8L1A6NGE4 600 aa15.02■□□□□ -0
PTPN7-213ENST00000486116 CRYBG1Q9Y4K1 1723 aa15.02□□□□□ -0.01
PTPN7-213ENST00000486116 UTRNP46939 3433 aa15.01□□□□□ -0.01
PTPN7-213ENST00000486116 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
PTPN7-213ENST00000486116 CASZ1Q86V15 1759 aa15.01□□□□□ -0.01
PTPN7-213ENST00000486116 TRPM3Q9HCF6 1732 aaPredicted RBP15□□□□□ -0.01
PTPN7-213ENST00000486116 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
PTPN7-213ENST00000486116 TRIM37O94972 964 aa15□□□□□ -0.01
PTPN7-213ENST00000486116 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
PTPN7-213ENST00000486116 C1QTNF8P60827 252 aa14.99□□□□□ -0.01
PTPN7-213ENST00000486116 SPON1Q9HCB6 807 aa14.99□□□□□ -0.01
PTPN7-213ENST00000486116 BTG4Q9NY30 223 aa14.99□□□□□ -0.01
PTPN7-213ENST00000486116 MYOM1P52179 1685 aa14.99□□□□□ -0.01
PTPN7-213ENST00000486116 ALS2Q96Q42 1657 aa14.99□□□□□ -0.01
PTPN7-213ENST00000486116 TECPR2O15040 1411 aa14.99□□□□□ -0.01
PTPN7-213ENST00000486116 SPATA31A5Q5VU36 1347 aa14.98□□□□□ -0.01
PTPN7-213ENST00000486116 SPATA31A7Q8IWB4 1347 aa14.98□□□□□ -0.01
PTPN7-213ENST00000486116 KCNQ2O43526 872 aa14.98□□□□□ -0.01
PTPN7-213ENST00000486116 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
PTPN7-213ENST00000486116 SBNO1A3KN83 1393 aa14.98□□□□□ -0.01
PTPN7-213ENST00000486116 PLEKHH1Q9ULM0 1364 aa14.98□□□□□ -0.01
PTPN7-213ENST00000486116 NRXN1Q9ULB1 1477 aa14.97□□□□□ -0.01
PTPN7-213ENST00000486116 APBA3O96018 575 aa14.97□□□□□ -0.01
PTPN7-213ENST00000486116 APLP2Q06481 763 aa14.97□□□□□ -0.01
PTPN7-213ENST00000486116 ARHGEF10O15013 1369 aa14.97□□□□□ -0.01
PTPN7-213ENST00000486116 RRBP1Q9P2E9 1410 aaKnown RBP14.95□□□□□ -0.02
PTPN7-213ENST00000486116 RGPD3A6NKT7 1758 aaPredicted RBP14.94□□□□□ -0.02
PTPN7-213ENST00000486116 RGPD4Q7Z3J3 1758 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms